RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 TFAP2AP05549 437 aa8.03□□□□□ -1.12
HERC1-212ENST00000561348 CT45A6P0DMU7 189 aa8.03□□□□□ -1.12
HERC1-212ENST00000561348 CT45A5P0DMU8 189 aa8.03□□□□□ -1.12
HERC1-212ENST00000561348 CT45A7P0DMV0 189 aa8.03□□□□□ -1.12
HERC1-212ENST00000561348 DTYMKP23919 212 aa8.03□□□□□ -1.12
HERC1-212ENST00000561348 SOX6P35712 828 aa8.03□□□□□ -1.12
HERC1-212ENST00000561348 RORCP51449 518 aa8.03□□□□□ -1.12
HERC1-212ENST00000561348 ZNF137PP52743 207 aa8.03□□□□□ -1.12
HERC1-212ENST00000561348 RPS16P62249 146 aaKnown RBP8.03□□□□□ -1.12
HERC1-212ENST00000561348 PNLIPRP3Q17RR3 467 aa8.03□□□□□ -1.12
HERC1-212ENST00000561348 RNASE12Q5GAN4 147 aaKnown RBP8.03□□□□□ -1.12
HERC1-212ENST00000561348 SNX29P2Q8IUI4 249 aa8.03□□□□□ -1.12
HERC1-212ENST00000561348 Q8N2B8 174 aa8.03□□□□□ -1.12
HERC1-212ENST00000561348 BEST4Q8NFU0 473 aa8.03□□□□□ -1.12
HERC1-212ENST00000561348 SLC25A46Q96AG3 418 aa8.03□□□□□ -1.12
HERC1-212ENST00000561348 R3HDM4Q96D70 268 aa8.03□□□□□ -1.12
HERC1-212ENST00000561348 A3GALT2U3KPV4 340 aa8.03□□□□□ -1.12
HERC1-212ENST00000561348 TRBV6-7A0A0A0MS04 114 aa8.02□□□□□ -1.13
HERC1-212ENST00000561348 FGF16O43320 207 aa8.02□□□□□ -1.13
HERC1-212ENST00000561348 HPGDSO60760 199 aa8.02□□□□□ -1.13
HERC1-212ENST00000561348 TUSC2O75896 110 aa8.02□□□□□ -1.13
HERC1-212ENST00000561348 EIF4EP06730 217 aaKnown RBP8.02□□□□□ -1.13
HERC1-212ENST00000561348 PF4V1P10720 104 aa8.02□□□□□ -1.13
HERC1-212ENST00000561348 SCAND1P57086 179 aa8.02□□□□□ -1.13
HERC1-212ENST00000561348 SLC35B1P78383 322 aa8.02□□□□□ -1.13
HERC1-212ENST00000561348 EBI3Q14213 229 aa8.02□□□□□ -1.13
HERC1-212ENST00000561348 OR2B11Q5JQS5 317 aa8.02□□□□□ -1.13
HERC1-212ENST00000561348 LY6G6FQ5SQ64 297 aa8.02□□□□□ -1.13
HERC1-212ENST00000561348 MZT2AQ6P582 158 aa8.02□□□□□ -1.13
HERC1-212ENST00000561348 ANKRD13BQ86YJ7 626 aa8.02□□□□□ -1.13
HERC1-212ENST00000561348 Q8N9W7 124 aa8.02□□□□□ -1.13
HERC1-212ENST00000561348 DCUN1D5Q9BTE7 237 aa8.02□□□□□ -1.13
HERC1-212ENST00000561348 FBXL15Q9H469 300 aa8.02□□□□□ -1.13
HERC1-212ENST00000561348 AUNIPQ9H7T9 357 aa8.02□□□□□ -1.13
HERC1-212ENST00000561348 PARP11Q9NR21 331 aa8.02□□□□□ -1.13
HERC1-212ENST00000561348 SLC35D1Q9NTN3 355 aa8.02□□□□□ -1.13
HERC1-212ENST00000561348 LIN7CQ9NUP9 197 aaKnown RBP8.02□□□□□ -1.13
HERC1-212ENST00000561348 ZNF107Q9UII5 783 aaPredicted RBP8.02□□□□□ -1.13
HERC1-212ENST00000561348 ANXA10Q9UJ72 324 aa8.02□□□□□ -1.13
HERC1-212ENST00000561348 WASHC3Q9Y3C0 194 aa8.02□□□□□ -1.13
HERC1-212ENST00000561348 WSB1Q9Y6I7 421 aa8.02□□□□□ -1.13
HERC1-212ENST00000561348 OR5H14A6NHG9 310 aa8.01□□□□□ -1.13
HERC1-212ENST00000561348 NUDT19A8MXV4 375 aa8.01□□□□□ -1.13
HERC1-212ENST00000561348 H0YJW9 148 aa8.01□□□□□ -1.13
HERC1-212ENST00000561348 NBR2O15453 112 aa8.01□□□□□ -1.13
HERC1-212ENST00000561348 RGS5O15539 181 aa8.01□□□□□ -1.13
HERC1-212ENST00000561348 XRCC3O43542 346 aa8.01□□□□□ -1.13
HERC1-212ENST00000561348 CTXN2P0C2S0 81 aa8.01□□□□□ -1.13
HERC1-212ENST00000561348 MC5RP33032 325 aa8.01□□□□□ -1.13
HERC1-212ENST00000561348 LUMP51884 338 aaPredicted RBP8.01□□□□□ -1.13
HERC1-212ENST00000561348 TAS2R20P59543 309 aa8.01□□□□□ -1.13
HERC1-212ENST00000561348 FXYD4P59646 89 aa8.01□□□□□ -1.13
HERC1-212ENST00000561348 GNB1P62873 340 aa8.01□□□□□ -1.13
HERC1-212ENST00000561348 CBX3Q13185 183 aa8.01□□□□□ -1.13
HERC1-212ENST00000561348 PRR31Q5SQ13 230 aa8.01□□□□□ -1.13
HERC1-212ENST00000561348 LIN54Q6MZP7 749 aa8.01□□□□□ -1.13
HERC1-212ENST00000561348 CNIH2Q6PI25 160 aa8.01□□□□□ -1.13
HERC1-212ENST00000561348 Q8N6K4 173 aa8.01□□□□□ -1.13
HERC1-212ENST00000561348 OR8H1Q8NGG4 311 aa8.01□□□□□ -1.13
HERC1-212ENST00000561348 HSPB9Q9BQS6 159 aa8.01□□□□□ -1.13
HERC1-212ENST00000561348 AGMATQ9BSE5 352 aa8.01□□□□□ -1.13
HERC1-212ENST00000561348 CABLES2Q9BTV7 478 aa8.01□□□□□ -1.13
HERC1-212ENST00000561348 WNT10AQ9GZT5 417 aa8.01□□□□□ -1.13
HERC1-212ENST00000561348 ABCG5Q9H222 651 aa8.01□□□□□ -1.13
HERC1-212ENST00000561348 GHITMQ9H3K2 345 aa8.01□□□□□ -1.13
HERC1-212ENST00000561348 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.01□□□□□ -1.13
HERC1-212ENST00000561348 PLSCR3Q9NRY6 295 aa8.01□□□□□ -1.13
HERC1-212ENST00000561348 SDHAF2Q9NX18 166 aa8.01□□□□□ -1.13
HERC1-212ENST00000561348 ANK2Q01484 3957 aa8□□□□□ -1.13
HERC1-212ENST00000561348 A0A0A6YYH2 397 aa8□□□□□ -1.13
HERC1-212ENST00000561348 A6NJ64 397 aa8□□□□□ -1.13
HERC1-212ENST00000561348 AP4M1O00189 453 aa8□□□□□ -1.13
HERC1-212ENST00000561348 ITGB1BP1O14713 200 aa8□□□□□ -1.13
HERC1-212ENST00000561348 KCNAB3O43448 404 aa8□□□□□ -1.13
HERC1-212ENST00000561348 GABARAPO95166 117 aa8□□□□□ -1.13
HERC1-212ENST00000561348 PF4P02776 101 aa8□□□□□ -1.13
HERC1-212ENST00000561348 OPN1MWP04001 364 aa8□□□□□ -1.13
HERC1-212ENST00000561348 OPN1MW2P0DN77 364 aa8□□□□□ -1.13
HERC1-212ENST00000561348 OPN1MW3P0DN78 364 aa8□□□□□ -1.13
HERC1-212ENST00000561348 ELK1P19419 428 aa8□□□□□ -1.13
HERC1-212ENST00000561348 VDAC1P21796 283 aa8□□□□□ -1.13
HERC1-212ENST00000561348 FCGR2CP31995 323 aa8□□□□□ -1.13
HERC1-212ENST00000561348 PRSS3P35030 304 aa8□□□□□ -1.13
HERC1-212ENST00000561348 ALDH3B2P48448 385 aa8□□□□□ -1.13
HERC1-212ENST00000561348 CTF1Q16619 201 aa8□□□□□ -1.13
HERC1-212ENST00000561348 RTL8BQ17RB0 113 aa8□□□□□ -1.13
HERC1-212ENST00000561348 ECSCRQ19T08 205 aa8□□□□□ -1.13
HERC1-212ENST00000561348 FAM71F2Q6NXP2 309 aa8□□□□□ -1.13
HERC1-212ENST00000561348 LCNL1Q6ZST4 164 aa8□□□□□ -1.13
HERC1-212ENST00000561348 C1QL4Q86Z23 238 aa8□□□□□ -1.13
HERC1-212ENST00000561348 H1FOOQ8IZA3 346 aaPredicted RBP8□□□□□ -1.13
HERC1-212ENST00000561348 STPG2Q8N412 459 aa8□□□□□ -1.13
HERC1-212ENST00000561348 ZNF383Q8NA42 475 aa8□□□□□ -1.13
HERC1-212ENST00000561348 BVESQ8NE79 360 aa8□□□□□ -1.13
HERC1-212ENST00000561348 CHPT1Q8WUD6 406 aa8□□□□□ -1.13
HERC1-212ENST00000561348 SECTM1Q8WVN6 248 aa8□□□□□ -1.13
HERC1-212ENST00000561348 AP3S1Q92572 193 aa8□□□□□ -1.13
HERC1-212ENST00000561348 FLYWCH2Q96CP2 140 aaKnown RBP8□□□□□ -1.13
HERC1-212ENST00000561348 MMP27Q9H306 513 aa8□□□□□ -1.13
HERC1-212ENST00000561348 NECAP2Q9NVZ3 263 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms