RNA–Protein interactions for RNA: ENST00000540452.1

C2CD3-215, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 430 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-215ENST00000540452 RCL1Q9Y2P8 373 aaKnown RBP6.89□□□□□ -1.31
C2CD3-215ENST00000540452 SESN1Q9Y6P5 492 aa6.89□□□□□ -1.31
C2CD3-215ENST00000540452 PCNX1Q96RV3 2341 aa6.89□□□□□ -1.31
C2CD3-215ENST00000540452 TEP1Q99973 2627 aaKnown RBP6.88□□□□□ -1.31
C2CD3-215ENST00000540452 CACNA1DQ01668 2161 aa6.88□□□□□ -1.31
C2CD3-215ENST00000540452 RAI1Q7Z5J4 1906 aaPredicted RBP6.88□□□□□ -1.31
C2CD3-215ENST00000540452 NKX2-6A6NCS4 301 aa6.88□□□□□ -1.31
C2CD3-215ENST00000540452 C3orf80F5H4A9 247 aa6.88□□□□□ -1.31
C2CD3-215ENST00000540452 WRBO00258 174 aa6.88□□□□□ -1.31
C2CD3-215ENST00000540452 FGF16O43320 207 aa6.88□□□□□ -1.31
C2CD3-215ENST00000540452 ADAM20O43506 726 aa6.88□□□□□ -1.31
C2CD3-215ENST00000540452 ZNF205O95201 554 aa6.88□□□□□ -1.31
C2CD3-215ENST00000540452 SPDEFO95238 335 aa6.88□□□□□ -1.31
C2CD3-215ENST00000540452 CLDN1O95832 211 aa6.88□□□□□ -1.31
C2CD3-215ENST00000540452 CYB5R3P00387 301 aaPredicted RBP6.88□□□□□ -1.31
C2CD3-215ENST00000540452 HPRT1P00492 218 aa6.88□□□□□ -1.31
C2CD3-215ENST00000540452 SEC11BP0C7V7 166 aa6.88□□□□□ -1.31
C2CD3-215ENST00000540452 PPP1CCP36873 323 aaKnown RBP6.88□□□□□ -1.31
C2CD3-215ENST00000540452 GPR12P47775 334 aa6.88□□□□□ -1.31
C2CD3-215ENST00000540452 AKR1C2P52895 323 aa6.88□□□□□ -1.31
C2CD3-215ENST00000540452 EDDM3BP56851 147 aa6.88□□□□□ -1.31
C2CD3-215ENST00000540452 RIPPLY3P57055 190 aa6.88□□□□□ -1.31
C2CD3-215ENST00000540452 RPL23AP62750 156 aaKnown RBP6.88□□□□□ -1.31
C2CD3-215ENST00000540452 SRSF1Q07955 248 aaKnown RBP eCLIP6.88□□□□□ -1.31
C2CD3-215ENST00000540452 EDDM3AQ14507 147 aa6.88□□□□□ -1.31
C2CD3-215ENST00000540452 POU2AF1Q16633 256 aa6.88□□□□□ -1.31
C2CD3-215ENST00000540452 C17orf58Q2M2W7 97 aa6.88□□□□□ -1.31
C2CD3-215ENST00000540452 HFEQ30201 348 aa6.88□□□□□ -1.31
C2CD3-215ENST00000540452 PDLIM3Q53GG5 364 aaPredicted RBP6.88□□□□□ -1.31
C2CD3-215ENST00000540452 SLC25A48Q6ZT89 311 aaKnown RBP6.88□□□□□ -1.31
C2CD3-215ENST00000540452 PUSL1Q8N0Z8 303 aaKnown RBP6.88□□□□□ -1.31
C2CD3-215ENST00000540452 LINC00311Q8N616 119 aa6.88□□□□□ -1.31
C2CD3-215ENST00000540452 OR2C3Q8N628 320 aa6.88□□□□□ -1.31
C2CD3-215ENST00000540452 DMBX1Q8NFW5 382 aa6.88□□□□□ -1.31
C2CD3-215ENST00000540452 OR52L2PQ8NGH6 319 aa6.88□□□□□ -1.31
C2CD3-215ENST00000540452 SMIM8Q96KF7 97 aa6.88□□□□□ -1.31
C2CD3-215ENST00000540452 CIB3Q96Q77 187 aaPredicted RBP6.88□□□□□ -1.31
C2CD3-215ENST00000540452 ABHD14AQ9BUJ0 271 aa6.88□□□□□ -1.31
C2CD3-215ENST00000540452 PARD6GQ9BYG4 376 aaPredicted RBP6.88□□□□□ -1.31
C2CD3-215ENST00000540452 KRTAP3-3Q9BYR6 98 aa6.88□□□□□ -1.31
C2CD3-215ENST00000540452 KRTAP3-2Q9BYR7 98 aa6.88□□□□□ -1.31
C2CD3-215ENST00000540452 RAB1BQ9H0U4 201 aa6.88□□□□□ -1.31
C2CD3-215ENST00000540452 HIPK2Q9H2X6 1198 aa6.88□□□□□ -1.31
C2CD3-215ENST00000540452 CYTL1Q9NRR1 136 aa6.88□□□□□ -1.31
C2CD3-215ENST00000540452 SDHAF2Q9NX18 166 aa6.88□□□□□ -1.31
C2CD3-215ENST00000540452 PRR13Q9NZ81 148 aa6.88□□□□□ -1.31
C2CD3-215ENST00000540452 SLC25A10Q9UBX3 287 aaPredicted RBP6.88□□□□□ -1.31
C2CD3-215ENST00000540452 LSM5Q9Y4Y9 91 aaKnown RBP6.88□□□□□ -1.31
C2CD3-215ENST00000540452 ABCA12Q86UK0 2595 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 DOPEY1Q5JWR5 2465 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 CREBBPQ92793 2442 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 A0A087X0M5 115 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 IGHV3-64DA0A0J9YX35 117 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 A0A1B0GX30 115 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 RAB19A4D1S5 217 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 MSGN1A6NI15 193 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 LEUTXA8MZ59 168 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 TRIM77I1YAP6 450 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 TMPRSS2O15393 492 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 ST8SIA5O15466 376 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 NDUFB3O43676 98 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 C1QL1O75973 258 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 DFFBO76075 338 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 IGKV1-39P01597 117 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 IGKV1D-39P04432 117 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 DUTP33316 252 aaKnown RBP6.87□□□□□ -1.31
C2CD3-215ENST00000540452 THBS3P49746 956 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 ZNF137PP52743 207 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 TMEM33P57088 247 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 RPL31P62899 125 aaKnown RBP6.87□□□□□ -1.31
C2CD3-215ENST00000540452 VAMP2P63027 116 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 BLOC1S1P78537 153 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 TMEM155Q4W5P6 130 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 SPRNQ5BIV9 151 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 C11orf71Q6IPW1 123 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 UQCC3Q6UW78 93 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 ALKAL2Q6UX46 152 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 STX12Q86Y82 276 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 FOXRED2Q8IWF2 684 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 SLC7A5P1Q8MH63 180 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 FGFRL1Q8N441 504 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 COMMD1Q8N668 190 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 BOLLQ8N9W6 283 aaKnown RBP6.87□□□□□ -1.31
C2CD3-215ENST00000540452 ZNF439Q8NDP4 499 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 OR52E5Q8NH55 327 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 OR4S2Q8NH73 311 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 RNASE11Q8TAA1 199 aaKnown RBP6.87□□□□□ -1.31
C2CD3-215ENST00000540452 C8orf46Q8TAG6 207 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 TCTEX1D2Q8WW35 142 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 ZNF714Q96N38 554 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 S1PR3Q99500 378 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 ZC4H2Q9NQZ6 224 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.87□□□□□ -1.31
C2CD3-215ENST00000540452 HSPB7Q9UBY9 170 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 NOTCH2Q04721 2471 aa6.87□□□□□ -1.31
C2CD3-215ENST00000540452 ANKHD1Q8IWZ3 2542 aaKnown RBP6.86□□□□□ -1.31
C2CD3-215ENST00000540452 IGHV3OR15-7A0A075B7D8 119 aa6.86□□□□□ -1.31
C2CD3-215ENST00000540452 TRAV39A0A0B4J263 110 aa6.86□□□□□ -1.31
C2CD3-215ENST00000540452 KIAA1324LA8MWY0 1029 aaPredicted RBP6.86□□□□□ -1.31
C2CD3-215ENST00000540452 UMAD1C9J7I0 102 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms