RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 RNF5Q99942 180 aa13.74□□□□□ -0.21
MDC1-206ENST00000489540 ANXA10Q9UJ72 324 aa13.74□□□□□ -0.21
MDC1-206ENST00000489540 H0YJW9 148 aa13.73□□□□□ -0.21
MDC1-206ENST00000489540 CSF1P09603 554 aa13.73□□□□□ -0.21
MDC1-206ENST00000489540 HOGA1Q86XE5 327 aa13.73□□□□□ -0.21
MDC1-206ENST00000489540 FOXRED2Q8IWF2 684 aa13.73□□□□□ -0.21
MDC1-206ENST00000489540 CHPT1Q8WUD6 406 aa13.73□□□□□ -0.21
MDC1-206ENST00000489540 AP3S1Q92572 193 aa13.73□□□□□ -0.21
MDC1-206ENST00000489540 COMMD3Q9UBI1 195 aa13.73□□□□□ -0.21
MDC1-206ENST00000489540 WASHC3Q9Y3C0 194 aa13.73□□□□□ -0.21
MDC1-206ENST00000489540 KCNAB3O43448 404 aa13.73□□□□□ -0.21
MDC1-206ENST00000489540 RBBP9O75884 186 aa13.73□□□□□ -0.21
MDC1-206ENST00000489540 SOX6P35712 828 aa13.73□□□□□ -0.21
MDC1-206ENST00000489540 RPL5P46777 297 aaKnown RBP13.73□□□□□ -0.21
MDC1-206ENST00000489540 TMEM69Q5SWH9 247 aa13.73□□□□□ -0.21
MDC1-206ENST00000489540 MZT2AQ6P582 158 aa13.73□□□□□ -0.21
MDC1-206ENST00000489540 FAM131AQ6UXB0 335 aa13.73□□□□□ -0.21
MDC1-206ENST00000489540 GLDNQ6ZMI3 551 aaPredicted RBP13.73□□□□□ -0.21
MDC1-206ENST00000489540 NDUFA11Q86Y39 141 aa13.73□□□□□ -0.21
MDC1-206ENST00000489540 BEST4Q8NFU0 473 aa13.73□□□□□ -0.21
MDC1-206ENST00000489540 NPBQ8NG41 125 aa13.73□□□□□ -0.21
MDC1-206ENST00000489540 RITA1Q96K30 269 aa13.73□□□□□ -0.21
MDC1-206ENST00000489540 OR2D2Q9H210 308 aa13.73□□□□□ -0.21
MDC1-206ENST00000489540 MMP27Q9H306 513 aa13.73□□□□□ -0.21
MDC1-206ENST00000489540 KIAA1456Q9P272 454 aa13.73□□□□□ -0.21
MDC1-206ENST00000489540 SMIM31A0A1B0GVY4 71 aa13.72□□□□□ -0.21
MDC1-206ENST00000489540 PSMB11A5LHX3 300 aa13.72□□□□□ -0.21
MDC1-206ENST00000489540 H7C2Y5 167 aa13.72□□□□□ -0.21
MDC1-206ENST00000489540 M0R1X1 148 aa13.72□□□□□ -0.21
MDC1-206ENST00000489540 AP4M1O00189 453 aa13.72□□□□□ -0.21
MDC1-206ENST00000489540 NBR2O15453 112 aa13.72□□□□□ -0.21
MDC1-206ENST00000489540 APOA1P02647 267 aa13.72□□□□□ -0.21
MDC1-206ENST00000489540 ZNF182P17025 639 aaPredicted RBP13.72□□□□□ -0.21
MDC1-206ENST00000489540 CD83Q01151 205 aa13.72□□□□□ -0.21
MDC1-206ENST00000489540 ZNF383Q8NA42 475 aa13.72□□□□□ -0.21
MDC1-206ENST00000489540 DRAXINQ8NBI3 349 aaPredicted RBP13.72□□□□□ -0.21
MDC1-206ENST00000489540 OR4X2Q8NGF9 303 aa13.72□□□□□ -0.21
MDC1-206ENST00000489540 RBMXL1Q96E39 390 aaKnown RBP13.72□□□□□ -0.21
MDC1-206ENST00000489540 CITED2Q99967 270 aaPredicted RBP13.72□□□□□ -0.21
MDC1-206ENST00000489540 SDHAF2Q9NX18 166 aa13.72□□□□□ -0.21
MDC1-206ENST00000489540 OR2W1Q9Y3N9 320 aa13.72□□□□□ -0.21
MDC1-206ENST00000489540 FBN3Q75N90 2809 aa13.71□□□□□ -0.21
MDC1-206ENST00000489540 SLC22A5O76082 557 aa13.71□□□□□ -0.22
MDC1-206ENST00000489540 APOA2P02652 100 aa13.71□□□□□ -0.22
MDC1-206ENST00000489540 OPN1MWP04001 364 aa13.71□□□□□ -0.22
MDC1-206ENST00000489540 OPN1MW2P0DN77 364 aa13.71□□□□□ -0.22
MDC1-206ENST00000489540 OPN1MW3P0DN78 364 aa13.71□□□□□ -0.22
MDC1-206ENST00000489540 LUMP51884 338 aaPredicted RBP13.71□□□□□ -0.22
MDC1-206ENST00000489540 TAS2R20P59543 309 aa13.71□□□□□ -0.22
MDC1-206ENST00000489540 ARPC4P59998 168 aa13.71□□□□□ -0.22
MDC1-206ENST00000489540 SLC35B1P78383 322 aa13.71□□□□□ -0.22
MDC1-206ENST00000489540 TAGLNQ01995 201 aaKnown RBP13.71□□□□□ -0.22
MDC1-206ENST00000489540 C5orf64Q2M2E5 130 aa13.71□□□□□ -0.22
MDC1-206ENST00000489540 LIN54Q6MZP7 749 aa13.71□□□□□ -0.22
MDC1-206ENST00000489540 GVQW1Q8N7I0 195 aa13.71□□□□□ -0.22
MDC1-206ENST00000489540 GON7Q9BXV9 100 aa13.71□□□□□ -0.22
MDC1-206ENST00000489540 TCRBV4S1A1TA0A5B7 111 aa13.7□□□□□ -0.22
MDC1-206ENST00000489540 LINC01548A6NM66 108 aa13.7□□□□□ -0.22
MDC1-206ENST00000489540 NDUFA3O95167 84 aa13.7□□□□□ -0.22
MDC1-206ENST00000489540 HLA-DQB1P01920 261 aa13.7□□□□□ -0.22
MDC1-206ENST00000489540 EIF4EP06730 217 aaKnown RBP13.7□□□□□ -0.22
MDC1-206ENST00000489540 NFYAP23511 347 aaPredicted RBP13.7□□□□□ -0.22
MDC1-206ENST00000489540 PDPNQ86YL7 162 aa13.7□□□□□ -0.22
MDC1-206ENST00000489540 CLVS1Q8IUQ0 354 aaPredicted RBP13.7□□□□□ -0.22
MDC1-206ENST00000489540 STPG2Q8N412 459 aa13.7□□□□□ -0.22
MDC1-206ENST00000489540 RAB2BQ8WUD1 216 aa13.7□□□□□ -0.22
MDC1-206ENST00000489540 NOL4LQ96MY1 436 aaPredicted RBP13.7□□□□□ -0.22
MDC1-206ENST00000489540 BCL7BQ9BQE9 202 aa13.7□□□□□ -0.22
MDC1-206ENST00000489540 BATF3Q9NR55 127 aa13.7□□□□□ -0.22
MDC1-206ENST00000489540 ZNF107Q9UII5 783 aaPredicted RBP13.7□□□□□ -0.22
MDC1-206ENST00000489540 TRRAPQ9Y4A5 3859 aa13.7□□□□□ -0.22
MDC1-206ENST00000489540 PTHLHP12272 177 aa13.69□□□□□ -0.22
MDC1-206ENST00000489540 CNTFRP26992 372 aa13.69□□□□□ -0.22
MDC1-206ENST00000489540 PRSS3P35030 304 aa13.69□□□□□ -0.22
MDC1-206ENST00000489540 THBS3P49746 956 aa13.69□□□□□ -0.22
MDC1-206ENST00000489540 TMBIM6P55061 237 aa13.69□□□□□ -0.22
MDC1-206ENST00000489540 NSUN5P1Q3KNT7 163 aa13.69□□□□□ -0.22
MDC1-206ENST00000489540 HIST2H2BDQ6DRA6 164 aa13.69□□□□□ -0.22
MDC1-206ENST00000489540 COMMD1Q8N668 190 aa13.69□□□□□ -0.22
MDC1-206ENST00000489540 FLYWCH2Q96CP2 140 aaKnown RBP13.69□□□□□ -0.22
MDC1-206ENST00000489540 ADTRPQ96IZ2 230 aa13.69□□□□□ -0.22
MDC1-206ENST00000489540 NECAP2Q9NVZ3 263 aa13.69□□□□□ -0.22
MDC1-206ENST00000489540 TSSC4Q9Y5U2 329 aaPredicted RBP13.69□□□□□ -0.22
MDC1-206ENST00000489540 RRHO14718 337 aa13.68□□□□□ -0.22
MDC1-206ENST00000489540 HPGDSO60760 199 aa13.68□□□□□ -0.22
MDC1-206ENST00000489540 TUSC2O75896 110 aa13.68□□□□□ -0.22
MDC1-206ENST00000489540 TSPAN15O95858 294 aa13.68□□□□□ -0.22
MDC1-206ENST00000489540 HLA-DRB1P01911 266 aa13.68□□□□□ -0.22
MDC1-206ENST00000489540 IGF1P05019 195 aa13.68□□□□□ -0.22
MDC1-206ENST00000489540 RRASP10301 218 aa13.68□□□□□ -0.22
MDC1-206ENST00000489540 LINC00205P59089 165 aa13.68□□□□□ -0.22
MDC1-206ENST00000489540 RPS16P62249 146 aaKnown RBP13.68□□□□□ -0.22
MDC1-206ENST00000489540 TCTEX1D4Q5JR98 221 aa13.68□□□□□ -0.22
MDC1-206ENST00000489540 ZNF329Q86UD4 541 aa13.68□□□□□ -0.22
MDC1-206ENST00000489540 ZNF645Q8N7E2 425 aa13.68□□□□□ -0.22
MDC1-206ENST00000489540 FAM110DQ8TAY7 271 aaPredicted RBP13.68□□□□□ -0.22
MDC1-206ENST00000489540 TSNAXQ99598 290 aaKnown RBP13.68□□□□□ -0.22
MDC1-206ENST00000489540 HSPB9Q9BQS6 159 aa13.68□□□□□ -0.22
MDC1-206ENST00000489540 IFT46Q9NQC8 304 aa13.68□□□□□ -0.22
MDC1-206ENST00000489540 SLC35D1Q9NTN3 355 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms