RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 ABCG5Q9H222 651 aa12.84□□□□□ -0.35
DDR1-246ENST00000485023 AUNIPQ9H7T9 357 aa12.84□□□□□ -0.35
DDR1-246ENST00000485023 TET2Q6N021 2002 aaPredicted RBP12.84□□□□□ -0.35
DDR1-246ENST00000485023 PSMB11A5LHX3 300 aa12.83□□□□□ -0.36
DDR1-246ENST00000485023 H0YJW9 148 aa12.83□□□□□ -0.36
DDR1-246ENST00000485023 WIPF1O43516 503 aa12.83□□□□□ -0.36
DDR1-246ENST00000485023 TMEM127O75204 238 aa12.83□□□□□ -0.36
DDR1-246ENST00000485023 PROP1O75360 226 aa12.83□□□□□ -0.36
DDR1-246ENST00000485023 TFAP2AP05549 437 aa12.83□□□□□ -0.36
DDR1-246ENST00000485023 NFYAP23511 347 aaPredicted RBP12.83□□□□□ -0.36
DDR1-246ENST00000485023 ALDH3B2P48448 385 aa12.83□□□□□ -0.36
DDR1-246ENST00000485023 CTF1Q16619 201 aa12.83□□□□□ -0.36
DDR1-246ENST00000485023 SRSF7Q16629 238 aaKnown RBP eCLIP12.83□□□□□ -0.36
DDR1-246ENST00000485023 TCTEX1D4Q5JR98 221 aa12.83□□□□□ -0.36
DDR1-246ENST00000485023 Q6ZS49 121 aa12.83□□□□□ -0.36
DDR1-246ENST00000485023 FOXRED2Q8IWF2 684 aa12.83□□□□□ -0.36
DDR1-246ENST00000485023 H1FOOQ8IZA3 346 aaPredicted RBP12.83□□□□□ -0.36
DDR1-246ENST00000485023 FAM71E2Q8N5Q1 922 aa12.83□□□□□ -0.36
DDR1-246ENST00000485023 OR4X2Q8NGF9 303 aa12.83□□□□□ -0.36
DDR1-246ENST00000485023 OR8H1Q8NGG4 311 aa12.83□□□□□ -0.36
DDR1-246ENST00000485023 S100A16Q96FQ6 103 aaKnown RBP12.83□□□□□ -0.36
DDR1-246ENST00000485023 C5orf30Q96GV9 206 aa12.83□□□□□ -0.36
DDR1-246ENST00000485023 DCSTAMPQ9H295 470 aa12.83□□□□□ -0.36
DDR1-246ENST00000485023 MMP27Q9H306 513 aa12.83□□□□□ -0.36
DDR1-246ENST00000485023 SDHAF2Q9NX18 166 aa12.83□□□□□ -0.36
DDR1-246ENST00000485023 WASHC3Q9Y3C0 194 aa12.83□□□□□ -0.36
DDR1-246ENST00000485023 A0A0A6YYH2 397 aa12.82□□□□□ -0.36
DDR1-246ENST00000485023 OR5H14A6NHG9 310 aa12.82□□□□□ -0.36
DDR1-246ENST00000485023 A6NJ64 397 aa12.82□□□□□ -0.36
DDR1-246ENST00000485023 NBR2O15453 112 aa12.82□□□□□ -0.36
DDR1-246ENST00000485023 IGHG2P01859 326 aa12.82□□□□□ -0.36
DDR1-246ENST00000485023 EIF4EP06730 217 aaKnown RBP12.82□□□□□ -0.36
DDR1-246ENST00000485023 SOX6P35712 828 aa12.82□□□□□ -0.36
DDR1-246ENST00000485023 TMEM69Q5SWH9 247 aa12.82□□□□□ -0.36
DDR1-246ENST00000485023 ZNF383Q8NA42 475 aa12.82□□□□□ -0.36
DDR1-246ENST00000485023 TOLLIPQ9H0E2 274 aa12.82□□□□□ -0.36
DDR1-246ENST00000485023 GHITMQ9H3K2 345 aa12.82□□□□□ -0.36
DDR1-246ENST00000485023 ZNF107Q9UII5 783 aaPredicted RBP12.82□□□□□ -0.36
DDR1-246ENST00000485023 ANXA10Q9UJ72 324 aa12.82□□□□□ -0.36
DDR1-246ENST00000485023 TCRBV4S1A1TA0A5B7 111 aa12.81□□□□□ -0.36
DDR1-246ENST00000485023 ADARB2-AS1A8MUL3 147 aa12.81□□□□□ -0.36
DDR1-246ENST00000485023 TAS2R20P59543 309 aa12.81□□□□□ -0.36
DDR1-246ENST00000485023 ARPC4P59998 168 aa12.81□□□□□ -0.36
DDR1-246ENST00000485023 NDUFA11Q86Y39 141 aa12.81□□□□□ -0.36
DDR1-246ENST00000485023 CLVS1Q8IUQ0 354 aaPredicted RBP12.81□□□□□ -0.36
DDR1-246ENST00000485023 STPG2Q8N412 459 aa12.81□□□□□ -0.36
DDR1-246ENST00000485023 BEST4Q8NFU0 473 aa12.81□□□□□ -0.36
DDR1-246ENST00000485023 KIAA1456Q9P272 454 aa12.81□□□□□ -0.36
DDR1-246ENST00000485023 AP4M1O00189 453 aa12.8□□□□□ -0.36
DDR1-246ENST00000485023 XRCC3O43542 346 aa12.8□□□□□ -0.36
DDR1-246ENST00000485023 HPGDSO60760 199 aa12.8□□□□□ -0.36
DDR1-246ENST00000485023 DIRAS3O95661 229 aa12.8□□□□□ -0.36
DDR1-246ENST00000485023 APOA2P02652 100 aa12.8□□□□□ -0.36
DDR1-246ENST00000485023 MC5RP33032 325 aa12.8□□□□□ -0.36
DDR1-246ENST00000485023 RORCP51449 518 aa12.8□□□□□ -0.36
DDR1-246ENST00000485023 PLGLAQ15195 96 aa12.8□□□□□ -0.36
DDR1-246ENST00000485023 CNIH2Q6PI25 160 aa12.8□□□□□ -0.36
DDR1-246ENST00000485023 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.8□□□□□ -0.36
DDR1-246ENST00000485023 OR5AN1Q8NGI8 311 aa12.8□□□□□ -0.36
DDR1-246ENST00000485023 CHPT1Q8WUD6 406 aa12.8□□□□□ -0.36
DDR1-246ENST00000485023 KCTD12Q96CX2 325 aaKnown RBP12.8□□□□□ -0.36
DDR1-246ENST00000485023 R3HDM4Q96D70 268 aa12.8□□□□□ -0.36
DDR1-246ENST00000485023 FBXL15Q9H469 300 aa12.8□□□□□ -0.36
DDR1-246ENST00000485023 SLC35D1Q9NTN3 355 aa12.8□□□□□ -0.36
DDR1-246ENST00000485023 PKD1L1Q8TDX9 2849 aa12.8□□□□□ -0.36
DDR1-246ENST00000485023 KCNAB3O43448 404 aa12.79□□□□□ -0.36
DDR1-246ENST00000485023 IGKV1-16P04430 117 aa12.79□□□□□ -0.36
DDR1-246ENST00000485023 CTXN2P0C2S0 81 aa12.79□□□□□ -0.36
DDR1-246ENST00000485023 CD83Q01151 205 aa12.79□□□□□ -0.36
DDR1-246ENST00000485023 C5orf64Q2M2E5 130 aa12.79□□□□□ -0.36
DDR1-246ENST00000485023 HOGA1Q86XE5 327 aa12.79□□□□□ -0.36
DDR1-246ENST00000485023 SNAPC3Q92966 411 aa12.79□□□□□ -0.36
DDR1-246ENST00000485023 CLCC1Q96S66 551 aa12.79□□□□□ -0.36
DDR1-246ENST00000485023 IFT46Q9NQC8 304 aa12.79□□□□□ -0.36
DDR1-246ENST00000485023 PARP11Q9NR21 331 aa12.79□□□□□ -0.36
DDR1-246ENST00000485023 MRPS7Q9Y2R9 242 aaKnown RBP12.79□□□□□ -0.36
DDR1-246ENST00000485023 CMYA5Q8N3K9 4069 aa12.78□□□□□ -0.36
DDR1-246ENST00000485023 IGKV1D-13A0A0B4J2D9 117 aa12.78□□□□□ -0.36
DDR1-246ENST00000485023 RRHO14718 337 aa12.78□□□□□ -0.36
DDR1-246ENST00000485023 OPN1MWP04001 364 aa12.78□□□□□ -0.36
DDR1-246ENST00000485023 OPN1MW2P0DN77 364 aa12.78□□□□□ -0.36
DDR1-246ENST00000485023 OPN1MW3P0DN78 364 aa12.78□□□□□ -0.36
DDR1-246ENST00000485023 IGKV1-13P0DP09 117 aa12.78□□□□□ -0.36
DDR1-246ENST00000485023 ELK1P19419 428 aa12.78□□□□□ -0.36
DDR1-246ENST00000485023 LUMP51884 338 aaPredicted RBP12.78□□□□□ -0.36
DDR1-246ENST00000485023 RPS16P62249 146 aaKnown RBP12.78□□□□□ -0.36
DDR1-246ENST00000485023 SLC35B1P78383 322 aa12.78□□□□□ -0.36
DDR1-246ENST00000485023 SPCS2Q15005 226 aa12.78□□□□□ -0.36
DDR1-246ENST00000485023 LCNL1Q6ZST4 164 aa12.78□□□□□ -0.36
DDR1-246ENST00000485023 BVESQ8NE79 360 aa12.78□□□□□ -0.36
DDR1-246ENST00000485023 NPBQ8NG41 125 aa12.78□□□□□ -0.36
DDR1-246ENST00000485023 ACOT12Q8WYK0 555 aa12.78□□□□□ -0.36
DDR1-246ENST00000485023 METTL1Q9UBP6 276 aaKnown RBP12.78□□□□□ -0.36
DDR1-246ENST00000485023 OR2W1Q9Y3N9 320 aa12.78□□□□□ -0.36
DDR1-246ENST00000485023 MGAM2Q2M2H8 2515 aa12.78□□□□□ -0.36
DDR1-246ENST00000485023 FAM25AB3EWG3 89 aa12.77□□□□□ -0.37
DDR1-246ENST00000485023 FAM25CB3EWG5 89 aa12.77□□□□□ -0.37
DDR1-246ENST00000485023 FAM25GB3EWG6 89 aa12.77□□□□□ -0.37
DDR1-246ENST00000485023 ATP6V0E1O15342 81 aa12.77□□□□□ -0.37
DDR1-246ENST00000485023 NDUFA3O95167 84 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms