RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 S100A16Q96FQ6 103 aaKnown RBP14.23□□□□□ -0.13
HDAC6-225ENST00000483506 CMTM3Q96MX0 182 aa14.23□□□□□ -0.13
HDAC6-225ENST00000483506 GINS4Q9BRT9 223 aa14.23□□□□□ -0.13
HDAC6-225ENST00000483506 ST6GALNAC5Q9BVH7 336 aa14.23□□□□□ -0.13
HDAC6-225ENST00000483506 ANXA10Q9UJ72 324 aa14.23□□□□□ -0.13
HDAC6-225ENST00000483506 ZNF580Q9UK33 172 aa14.23□□□□□ -0.13
HDAC6-225ENST00000483506 RNF150Q9ULK6 438 aa14.23□□□□□ -0.13
HDAC6-225ENST00000483506 KCNAB3O43448 404 aa14.22□□□□□ -0.13
HDAC6-225ENST00000483506 RBBP9O75884 186 aa14.22□□□□□ -0.13
HDAC6-225ENST00000483506 NDUFA3O95167 84 aa14.22□□□□□ -0.13
HDAC6-225ENST00000483506 TSPAN15O95858 294 aa14.22□□□□□ -0.13
HDAC6-225ENST00000483506 CSF1P09603 554 aa14.22□□□□□ -0.13
HDAC6-225ENST00000483506 MMDQ15546 238 aa14.22□□□□□ -0.13
HDAC6-225ENST00000483506 TCTEX1D4Q5JR98 221 aa14.22□□□□□ -0.13
HDAC6-225ENST00000483506 GPR141Q7Z602 305 aa14.22□□□□□ -0.13
HDAC6-225ENST00000483506 CENPVQ7Z7K6 275 aaPredicted RBP14.22□□□□□ -0.13
HDAC6-225ENST00000483506 SAMD12Q8N8I0 201 aa14.22□□□□□ -0.13
HDAC6-225ENST00000483506 CHPT1Q8WUD6 406 aa14.22□□□□□ -0.13
HDAC6-225ENST00000483506 RITA1Q96K30 269 aa14.22□□□□□ -0.13
HDAC6-225ENST00000483506 RNF5Q99942 180 aa14.22□□□□□ -0.13
HDAC6-225ENST00000483506 CITED2Q99967 270 aaPredicted RBP14.22□□□□□ -0.13
HDAC6-225ENST00000483506 RASL11BQ9BPW5 248 aa14.22□□□□□ -0.13
HDAC6-225ENST00000483506 OR2D2Q9H210 308 aa14.22□□□□□ -0.13
HDAC6-225ENST00000483506 WASHC3Q9Y3C0 194 aa14.22□□□□□ -0.13
HDAC6-225ENST00000483506 NBR2O15453 112 aa14.21□□□□□ -0.13
HDAC6-225ENST00000483506 OR8U9P0C7N5 309 aa14.21□□□□□ -0.13
HDAC6-225ENST00000483506 GPR107Q5VW38 600 aa14.21□□□□□ -0.13
HDAC6-225ENST00000483506 HIST2H2BDQ6DRA6 164 aa14.21□□□□□ -0.13
HDAC6-225ENST00000483506 GLDNQ6ZMI3 551 aaPredicted RBP14.21□□□□□ -0.13
HDAC6-225ENST00000483506 HOGA1Q86XE5 327 aa14.21□□□□□ -0.13
HDAC6-225ENST00000483506 FOXRED2Q8IWF2 684 aa14.21□□□□□ -0.13
HDAC6-225ENST00000483506 ZNF383Q8NA42 475 aa14.21□□□□□ -0.13
HDAC6-225ENST00000483506 OR8U1Q8NH10 309 aa14.21□□□□□ -0.13
HDAC6-225ENST00000483506 ACOT12Q8WYK0 555 aa14.21□□□□□ -0.13
HDAC6-225ENST00000483506 C5orf30Q96GV9 206 aa14.21□□□□□ -0.13
HDAC6-225ENST00000483506 SDHAF2Q9NX18 166 aa14.21□□□□□ -0.13
HDAC6-225ENST00000483506 LINC01548A6NM66 108 aa14.2□□□□□ -0.14
HDAC6-225ENST00000483506 AP4M1O00189 453 aa14.2□□□□□ -0.14
HDAC6-225ENST00000483506 HLA-DRB1P01911 266 aa14.2□□□□□ -0.14
HDAC6-225ENST00000483506 CNTFRP26992 372 aa14.2□□□□□ -0.14
HDAC6-225ENST00000483506 SOX6P35712 828 aa14.2□□□□□ -0.14
HDAC6-225ENST00000483506 RORCP51449 518 aa14.2□□□□□ -0.14
HDAC6-225ENST00000483506 C5orf64Q2M2E5 130 aa14.2□□□□□ -0.14
HDAC6-225ENST00000483506 STPG2Q8N412 459 aa14.2□□□□□ -0.14
HDAC6-225ENST00000483506 OR4X2Q8NGF9 303 aa14.2□□□□□ -0.14
HDAC6-225ENST00000483506 NOL4LQ96MY1 436 aaPredicted RBP14.2□□□□□ -0.14
HDAC6-225ENST00000483506 HSPB9Q9BQS6 159 aa14.2□□□□□ -0.14
HDAC6-225ENST00000483506 PSMB11A5LHX3 300 aa14.19□□□□□ -0.14
HDAC6-225ENST00000483506 TUSC2O75896 110 aa14.19□□□□□ -0.14
HDAC6-225ENST00000483506 APOA1P02647 267 aa14.19□□□□□ -0.14
HDAC6-225ENST00000483506 CBX5P45973 191 aa14.19□□□□□ -0.14
HDAC6-225ENST00000483506 TMEM69Q5SWH9 247 aa14.19□□□□□ -0.14
HDAC6-225ENST00000483506 C10orf99Q6UWK7 81 aa14.19□□□□□ -0.14
HDAC6-225ENST00000483506 PDPNQ86YL7 162 aa14.19□□□□□ -0.14
HDAC6-225ENST00000483506 DRAXINQ8NBI3 349 aaPredicted RBP14.19□□□□□ -0.14
HDAC6-225ENST00000483506 BEST4Q8NFU0 473 aa14.19□□□□□ -0.14
HDAC6-225ENST00000483506 ZNF107Q9UII5 783 aaPredicted RBP14.19□□□□□ -0.14
HDAC6-225ENST00000483506 ANAPC10Q9UM13 185 aa14.19□□□□□ -0.14
HDAC6-225ENST00000483506 OR2W1Q9Y3N9 320 aa14.19□□□□□ -0.14
HDAC6-225ENST00000483506 MEGF8Q7Z7M0 2845 aa14.19□□□□□ -0.14
HDAC6-225ENST00000483506 M0R1X1 148 aa14.18□□□□□ -0.14
HDAC6-225ENST00000483506 HLA-DQB1P01920 261 aa14.18□□□□□ -0.14
HDAC6-225ENST00000483506 OPN1MWP04001 364 aa14.18□□□□□ -0.14
HDAC6-225ENST00000483506 IGF1P05019 195 aa14.18□□□□□ -0.14
HDAC6-225ENST00000483506 EIF4EP06730 217 aaKnown RBP14.18□□□□□ -0.14
HDAC6-225ENST00000483506 OPN1MW2P0DN77 364 aa14.18□□□□□ -0.14
HDAC6-225ENST00000483506 OPN1MW3P0DN78 364 aa14.18□□□□□ -0.14
HDAC6-225ENST00000483506 LINC00205P59089 165 aa14.18□□□□□ -0.14
HDAC6-225ENST00000483506 TAS2R20P59543 309 aa14.18□□□□□ -0.14
HDAC6-225ENST00000483506 TAGLNQ01995 201 aaKnown RBP14.18□□□□□ -0.14
HDAC6-225ENST00000483506 COMMD1Q8N668 190 aa14.18□□□□□ -0.14
HDAC6-225ENST00000483506 GVQW1Q8N7I0 195 aa14.18□□□□□ -0.14
HDAC6-225ENST00000483506 BCL7BQ9BQE9 202 aa14.18□□□□□ -0.14
HDAC6-225ENST00000483506 COMMD3Q9UBI1 195 aa14.18□□□□□ -0.14
HDAC6-225ENST00000483506 TSSC4Q9Y5U2 329 aaPredicted RBP14.18□□□□□ -0.14
HDAC6-225ENST00000483506 H7C2Y5 167 aa14.17□□□□□ -0.14
HDAC6-225ENST00000483506 RRHO14718 337 aa14.17□□□□□ -0.14
HDAC6-225ENST00000483506 SPDEFO95238 335 aa14.17□□□□□ -0.14
HDAC6-225ENST00000483506 APOA2P02652 100 aa14.17□□□□□ -0.14
HDAC6-225ENST00000483506 IGKV1-16P04430 117 aa14.17□□□□□ -0.14
HDAC6-225ENST00000483506 PTHLHP12272 177 aa14.17□□□□□ -0.14
HDAC6-225ENST00000483506 ZNF182P17025 639 aaPredicted RBP14.17□□□□□ -0.14
HDAC6-225ENST00000483506 NFYAP23511 347 aaPredicted RBP14.17□□□□□ -0.14
HDAC6-225ENST00000483506 SLC35B1P78383 322 aa14.17□□□□□ -0.14
HDAC6-225ENST00000483506 CFHR3Q02985 330 aa14.17□□□□□ -0.14
HDAC6-225ENST00000483506 NSUN5P1Q3KNT7 163 aa14.17□□□□□ -0.14
HDAC6-225ENST00000483506 ZNF645Q8N7E2 425 aa14.17□□□□□ -0.14
HDAC6-225ENST00000483506 AP3S1Q92572 193 aa14.17□□□□□ -0.14
HDAC6-225ENST00000483506 SNAPC3Q92966 411 aa14.17□□□□□ -0.14
HDAC6-225ENST00000483506 GON7Q9BXV9 100 aa14.17□□□□□ -0.14
HDAC6-225ENST00000483506 KIAA1456Q9P272 454 aa14.17□□□□□ -0.14
HDAC6-225ENST00000483506 LINC00527Q9UJ94 153 aa14.17□□□□□ -0.14
HDAC6-225ENST00000483506 NOTCH1P46531 2555 aa14.17□□□□□ -0.14
HDAC6-225ENST00000483506 IGHV7-81A0A0B4J1V7 117 aa14.16□□□□□ -0.14
HDAC6-225ENST00000483506 TCRBV4S1A1TA0A5B7 111 aa14.16□□□□□ -0.14
HDAC6-225ENST00000483506 SLC22A5O76082 557 aa14.16□□□□□ -0.14
HDAC6-225ENST00000483506 RPL5P46777 297 aaKnown RBP14.16□□□□□ -0.14
HDAC6-225ENST00000483506 THBS3P49746 956 aa14.16□□□□□ -0.14
HDAC6-225ENST00000483506 LUMP51884 338 aaPredicted RBP14.16□□□□□ -0.14
HDAC6-225ENST00000483506 LIN54Q6MZP7 749 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms