RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 TSSC4Q9Y5U2 329 aaPredicted RBP14.76□□□□□ -0.05
USP39-209ENST00000458268 ADARB2-AS1A8MUL3 147 aa14.75□□□□□ -0.05
USP39-209ENST00000458268 NUDT19A8MXV4 375 aa14.75□□□□□ -0.05
USP39-209ENST00000458268 KCNAB3O43448 404 aa14.75□□□□□ -0.05
USP39-209ENST00000458268 PF4P02776 101 aa14.75□□□□□ -0.05
USP39-209ENST00000458268 RPS19P39019 145 aaKnown RBP14.75□□□□□ -0.05
USP39-209ENST00000458268 NCS1P62166 190 aa14.75□□□□□ -0.05
USP39-209ENST00000458268 DEFA6Q01524 100 aa14.75□□□□□ -0.05
USP39-209ENST00000458268 FAM71F2Q6NXP2 309 aa14.75□□□□□ -0.05
USP39-209ENST00000458268 FAM71E2Q8N5Q1 922 aa14.75□□□□□ -0.05
USP39-209ENST00000458268 AGMATQ9BSE5 352 aa14.75□□□□□ -0.05
USP39-209ENST00000458268 PARP11Q9NR21 331 aa14.75□□□□□ -0.05
USP39-209ENST00000458268 WASHC3Q9Y3C0 194 aa14.75□□□□□ -0.05
USP39-209ENST00000458268 VWFP04275 2813 aa14.74□□□□□ -0.05
USP39-209ENST00000458268 TRBV6-7A0A0A0MS04 114 aa14.74□□□□□ -0.05
USP39-209ENST00000458268 OR5H14A6NHG9 310 aa14.74□□□□□ -0.05
USP39-209ENST00000458268 H0YJW9 148 aa14.74□□□□□ -0.05
USP39-209ENST00000458268 ITGB1BP1O14713 200 aa14.74□□□□□ -0.05
USP39-209ENST00000458268 APOA2P02652 100 aa14.74□□□□□ -0.05
USP39-209ENST00000458268 TFAP2AP05549 437 aa14.74□□□□□ -0.05
USP39-209ENST00000458268 VDAC1P21796 283 aa14.74□□□□□ -0.05
USP39-209ENST00000458268 DTYMKP23919 212 aa14.74□□□□□ -0.05
USP39-209ENST00000458268 VBP1P61758 197 aa14.74□□□□□ -0.05
USP39-209ENST00000458268 ZNF260Q3ZCT1 412 aa14.74□□□□□ -0.05
USP39-209ENST00000458268 LCNL1Q6ZST4 164 aa14.74□□□□□ -0.05
USP39-209ENST00000458268 CLCC1Q96S66 551 aa14.74□□□□□ -0.05
USP39-209ENST00000458268 FBXL15Q9H469 300 aa14.74□□□□□ -0.05
USP39-209ENST00000458268 DIABLOQ9NR28 239 aa14.74□□□□□ -0.05
USP39-209ENST00000458268 MEIS3P1A6NDR6 274 aa14.73□□□□□ -0.05
USP39-209ENST00000458268 PTHLHP12272 177 aa14.73□□□□□ -0.05
USP39-209ENST00000458268 RPS16P62249 146 aaKnown RBP14.73□□□□□ -0.05
USP39-209ENST00000458268 SAMD12Q8N8I0 201 aa14.73□□□□□ -0.05
USP39-209ENST00000458268 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.73□□□□□ -0.05
USP39-209ENST00000458268 WSB1Q9Y6I7 421 aa14.73□□□□□ -0.05
USP39-209ENST00000458268 A3GALT2U3KPV4 340 aa14.73□□□□□ -0.05
USP39-209ENST00000458268 PLXNB1O43157 2135 aa14.72□□□□□ -0.05
USP39-209ENST00000458268 SSX5O60225 188 aa14.72□□□□□ -0.05
USP39-209ENST00000458268 SMIM18P0DKX4 95 aa14.72□□□□□ -0.05
USP39-209ENST00000458268 NFYAP23511 347 aaPredicted RBP14.72□□□□□ -0.05
USP39-209ENST00000458268 MC5RP33032 325 aa14.72□□□□□ -0.05
USP39-209ENST00000458268 ARPC4P59998 168 aa14.72□□□□□ -0.05
USP39-209ENST00000458268 PITPNAQ00169 270 aa14.72□□□□□ -0.05
USP39-209ENST00000458268 PNLIPRP3Q17RR3 467 aa14.72□□□□□ -0.05
USP39-209ENST00000458268 C5orf64Q2M2E5 130 aa14.72□□□□□ -0.05
USP39-209ENST00000458268 C18orf65Q6ZTR6 163 aa14.72□□□□□ -0.05
USP39-209ENST00000458268 CROCCP3Q8IVE0 287 aa14.72□□□□□ -0.05
USP39-209ENST00000458268 ZNF383Q8NA42 475 aa14.72□□□□□ -0.05
USP39-209ENST00000458268 KLHL30-AS1Q8NEE0 82 aa14.72□□□□□ -0.05
USP39-209ENST00000458268 GHITMQ9H3K2 345 aa14.72□□□□□ -0.05
USP39-209ENST00000458268 SLC35D1Q9NTN3 355 aa14.72□□□□□ -0.05
USP39-209ENST00000458268 SDHAF2Q9NX18 166 aa14.72□□□□□ -0.05
USP39-209ENST00000458268 SPATA2Q9UM82 520 aa14.72□□□□□ -0.05
USP39-209ENST00000458268 TRIM64CA6NLI5 447 aa14.71□□□□□ -0.05
USP39-209ENST00000458268 G3V4G9 280 aa14.71□□□□□ -0.05
USP39-209ENST00000458268 CD33P20138 364 aa14.71□□□□□ -0.05
USP39-209ENST00000458268 SCAND1P57086 179 aa14.71□□□□□ -0.05
USP39-209ENST00000458268 ECSCRQ19T08 205 aa14.71□□□□□ -0.05
USP39-209ENST00000458268 LIN54Q6MZP7 749 aa14.71□□□□□ -0.05
USP39-209ENST00000458268 H1FOOQ8IZA3 346 aaPredicted RBP14.71□□□□□ -0.05
USP39-209ENST00000458268 GVQW1Q8N7I0 195 aa14.71□□□□□ -0.05
USP39-209ENST00000458268 OR13F1Q8NGS4 319 aa14.71□□□□□ -0.05
USP39-209ENST00000458268 NAA50Q9GZZ1 169 aaKnown RBP14.71□□□□□ -0.05
USP39-209ENST00000458268 RRHO14718 337 aa14.7□□□□□ -0.06
USP39-209ENST00000458268 ATP6V0E1O15342 81 aa14.7□□□□□ -0.06
USP39-209ENST00000458268 PROP1O75360 226 aa14.7□□□□□ -0.06
USP39-209ENST00000458268 RPL23AP62750 156 aaKnown RBP14.7□□□□□ -0.06
USP39-209ENST00000458268 CBX3Q13185 183 aa14.7□□□□□ -0.06
USP39-209ENST00000458268 CXorf66Q5JRM2 361 aaPredicted RBP14.7□□□□□ -0.06
USP39-209ENST00000458268 UBE2NLQ5JXB2 153 aa14.7□□□□□ -0.06
USP39-209ENST00000458268 C8orf86Q6ZUL3 223 aa14.7□□□□□ -0.06
USP39-209ENST00000458268 OR5AN1Q8NGI8 311 aa14.7□□□□□ -0.06
USP39-209ENST00000458268 S100A16Q96FQ6 103 aaKnown RBP14.7□□□□□ -0.06
USP39-209ENST00000458268 GON7Q9BXV9 100 aa14.7□□□□□ -0.06
USP39-209ENST00000458268 DCSTAMPQ9H295 470 aa14.7□□□□□ -0.06
USP39-209ENST00000458268 COMMD3Q9UBI1 195 aa14.7□□□□□ -0.06
USP39-209ENST00000458268 METTL1Q9UBP6 276 aaKnown RBP14.7□□□□□ -0.06
USP39-209ENST00000458268 G3V318 75 aa14.69□□□□□ -0.06
USP39-209ENST00000458268 IGKV1-16P04430 117 aa14.69□□□□□ -0.06
USP39-209ENST00000458268 RPLP1P05386 114 aaKnown RBP14.69□□□□□ -0.06
USP39-209ENST00000458268 GPR107Q5VW38 600 aa14.69□□□□□ -0.06
USP39-209ENST00000458268 TEX38Q6PEX7 206 aa14.69□□□□□ -0.06
USP39-209ENST00000458268 Q6ZS49 121 aa14.69□□□□□ -0.06
USP39-209ENST00000458268 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.69□□□□□ -0.06
USP39-209ENST00000458268 BVESQ8NE79 360 aa14.69□□□□□ -0.06
USP39-209ENST00000458268 BEST4Q8NFU0 473 aa14.69□□□□□ -0.06
USP39-209ENST00000458268 C5orf30Q96GV9 206 aa14.69□□□□□ -0.06
USP39-209ENST00000458268 MRPS26Q9BYN8 205 aaKnown RBP14.69□□□□□ -0.06
USP39-209ENST00000458268 OR51J1Q9H342 316 aa14.69□□□□□ -0.06
USP39-209ENST00000458268 AUNIPQ9H7T9 357 aa14.69□□□□□ -0.06
USP39-209ENST00000458268 IFT46Q9NQC8 304 aa14.69□□□□□ -0.06
USP39-209ENST00000458268 ANXA10Q9UJ72 324 aa14.69□□□□□ -0.06
USP39-209ENST00000458268 CMYA5Q8N3K9 4069 aa14.68□□□□□ -0.06
USP39-209ENST00000458268 IGHV7-81A0A0B4J1V7 117 aa14.68□□□□□ -0.06
USP39-209ENST00000458268 SLC25A17O43808 307 aa14.68□□□□□ -0.06
USP39-209ENST00000458268 RBBP9O75884 186 aa14.68□□□□□ -0.06
USP39-209ENST00000458268 TUSC2O75896 110 aa14.68□□□□□ -0.06
USP39-209ENST00000458268 HLA-DRB1P01911 266 aa14.68□□□□□ -0.06
USP39-209ENST00000458268 CTXN2P0C2S0 81 aa14.68□□□□□ -0.06
USP39-209ENST00000458268 LUMP51884 338 aaPredicted RBP14.68□□□□□ -0.06
USP39-209ENST00000458268 RAB25P57735 213 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms