RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 ALDH3B2P48448 385 aa11.72□□□□□ -0.53
HDAC4-204ENST00000446876 CTF1Q16619 201 aa11.72□□□□□ -0.53
HDAC4-204ENST00000446876 SRSF7Q16629 238 aaKnown RBP eCLIP11.72□□□□□ -0.533e-10■■■■■ 33.8
HDAC4-204ENST00000446876 UBE2NLQ5JXB2 153 aa11.72□□□□□ -0.53
HDAC4-204ENST00000446876 ZNF329Q86UD4 541 aa11.72□□□□□ -0.53
HDAC4-204ENST00000446876 H1FOOQ8IZA3 346 aaPredicted RBP11.72□□□□□ -0.53
HDAC4-204ENST00000446876 GVQW1Q8N7I0 195 aa11.72□□□□□ -0.53
HDAC4-204ENST00000446876 RASL11BQ9BPW5 248 aa11.72□□□□□ -0.53
HDAC4-204ENST00000446876 ABCG5Q9H222 651 aa11.72□□□□□ -0.53
HDAC4-204ENST00000446876 MMP27Q9H306 513 aa11.72□□□□□ -0.53
HDAC4-204ENST00000446876 VWFP04275 2813 aa11.72□□□□□ -0.53
HDAC4-204ENST00000446876 PSMB11A5LHX3 300 aa11.71□□□□□ -0.53
HDAC4-204ENST00000446876 MEIS3P1A6NDR6 274 aa11.71□□□□□ -0.53
HDAC4-204ENST00000446876 M0R1X1 148 aa11.71□□□□□ -0.53
HDAC4-204ENST00000446876 TMEM127O75204 238 aa11.71□□□□□ -0.53
HDAC4-204ENST00000446876 TFAP2AP05549 437 aa11.71□□□□□ -0.53
HDAC4-204ENST00000446876 PITPNAQ00169 270 aa11.71□□□□□ -0.53
HDAC4-204ENST00000446876 ANKRD13BQ86YJ7 626 aa11.71□□□□□ -0.53
HDAC4-204ENST00000446876 ZNF383Q8NA42 475 aa11.71□□□□□ -0.53
HDAC4-204ENST00000446876 OR8H1Q8NGG4 311 aa11.71□□□□□ -0.53
HDAC4-204ENST00000446876 DCSTAMPQ9H295 470 aa11.71□□□□□ -0.53
HDAC4-204ENST00000446876 AUNIPQ9H7T9 357 aa11.71□□□□□ -0.53
HDAC4-204ENST00000446876 DIABLOQ9NR28 239 aa11.71□□□□□ -0.53
HDAC4-204ENST00000446876 A0A0A6YYH2 397 aa11.7□□□□□ -0.54
HDAC4-204ENST00000446876 OR5H14A6NHG9 310 aa11.7□□□□□ -0.54
HDAC4-204ENST00000446876 A6NJ64 397 aa11.7□□□□□ -0.54
HDAC4-204ENST00000446876 H7C2Y5 167 aa11.7□□□□□ -0.54
HDAC4-204ENST00000446876 NBR2O15453 112 aa11.7□□□□□ -0.54
HDAC4-204ENST00000446876 DIRAS3O95661 229 aa11.7□□□□□ -0.54
HDAC4-204ENST00000446876 EIF4EP06730 217 aaKnown RBP11.7□□□□□ -0.54
HDAC4-204ENST00000446876 NFYAP23511 347 aaPredicted RBP11.7□□□□□ -0.54
HDAC4-204ENST00000446876 CD83Q01151 205 aa11.7□□□□□ -0.54
HDAC4-204ENST00000446876 KHDC1LQ5JSQ8 128 aa11.7□□□□□ -0.54
HDAC4-204ENST00000446876 GPR141Q7Z602 305 aa11.7□□□□□ -0.54
HDAC4-204ENST00000446876 NDUFA11Q86Y39 141 aa11.7□□□□□ -0.54
HDAC4-204ENST00000446876 OR5AN1Q8NGI8 311 aa11.7□□□□□ -0.54
HDAC4-204ENST00000446876 GHITMQ9H3K2 345 aa11.7□□□□□ -0.54
HDAC4-204ENST00000446876 SDHAF2Q9NX18 166 aa11.7□□□□□ -0.54
HDAC4-204ENST00000446876 COMMD3Q9UBI1 195 aa11.7□□□□□ -0.54
HDAC4-204ENST00000446876 ANXA10Q9UJ72 324 aa11.7□□□□□ -0.54
HDAC4-204ENST00000446876 WASHC3Q9Y3C0 194 aa11.7□□□□□ -0.54
HDAC4-204ENST00000446876 RBM7Q9Y580 266 aaKnown RBP11.7□□□□□ -0.54
HDAC4-204ENST00000446876 PLXNB1O43157 2135 aa11.69□□□□□ -0.54
HDAC4-204ENST00000446876 TCRBV4S1A1TA0A5B7 111 aa11.69□□□□□ -0.54
HDAC4-204ENST00000446876 XRCC3O43542 346 aa11.69□□□□□ -0.54
HDAC4-204ENST00000446876 SOX6P35712 828 aa11.69□□□□□ -0.54
HDAC4-204ENST00000446876 FOXRED2Q8IWF2 684 aa11.69□□□□□ -0.54
HDAC4-204ENST00000446876 STPG2Q8N412 459 aa11.69□□□□□ -0.54
HDAC4-204ENST00000446876 OR4X2Q8NGF9 303 aa11.69□□□□□ -0.54
HDAC4-204ENST00000446876 S100A16Q96FQ6 103 aaKnown RBP11.69□□□□□ -0.54
HDAC4-204ENST00000446876 FBXL15Q9H469 300 aa11.69□□□□□ -0.54
HDAC4-204ENST00000446876 ZNF107Q9UII5 783 aaPredicted RBP11.69□□□□□ -0.54
HDAC4-204ENST00000446876 IGKV1D-13A0A0B4J2D9 117 aa11.68□□□□□ -0.54
HDAC4-204ENST00000446876 IGKV1-16P04430 117 aa11.68□□□□□ -0.54
HDAC4-204ENST00000446876 IGKV1-13P0DP09 117 aa11.68□□□□□ -0.54
HDAC4-204ENST00000446876 TAS2R20P59543 309 aa11.68□□□□□ -0.54
HDAC4-204ENST00000446876 C5orf64Q2M2E5 130 aa11.68□□□□□ -0.54
HDAC4-204ENST00000446876 TMEM69Q5SWH9 247 aa11.68□□□□□ -0.54
HDAC4-204ENST00000446876 CNIH2Q6PI25 160 aa11.68□□□□□ -0.54
HDAC4-204ENST00000446876 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.68□□□□□ -0.54
HDAC4-204ENST00000446876 BEST4Q8NFU0 473 aa11.68□□□□□ -0.54
HDAC4-204ENST00000446876 NPBQ8NG41 125 aa11.68□□□□□ -0.54
HDAC4-204ENST00000446876 CHPT1Q8WUD6 406 aa11.68□□□□□ -0.54
HDAC4-204ENST00000446876 KCTD12Q96CX2 325 aaKnown RBP11.68□□□□□ -0.54
HDAC4-204ENST00000446876 R3HDM4Q96D70 268 aa11.68□□□□□ -0.54
HDAC4-204ENST00000446876 KIAA1456Q9P272 454 aa11.68□□□□□ -0.54
HDAC4-204ENST00000446876 AP4M1O00189 453 aa11.67□□□□□ -0.54
HDAC4-204ENST00000446876 KCNAB3O43448 404 aa11.67□□□□□ -0.54
HDAC4-204ENST00000446876 HPGDSO60760 199 aa11.67□□□□□ -0.54
HDAC4-204ENST00000446876 NDUFA3O95167 84 aa11.67□□□□□ -0.54
HDAC4-204ENST00000446876 APOA2P02652 100 aa11.67□□□□□ -0.54
HDAC4-204ENST00000446876 MC5RP33032 325 aa11.67□□□□□ -0.54
HDAC4-204ENST00000446876 ARPC4P59998 168 aa11.67□□□□□ -0.54
HDAC4-204ENST00000446876 LCNL1Q6ZST4 164 aa11.67□□□□□ -0.54
HDAC4-204ENST00000446876 HOGA1Q86XE5 327 aa11.67□□□□□ -0.54
HDAC4-204ENST00000446876 CLVS1Q8IUQ0 354 aaPredicted RBP11.67□□□□□ -0.54
HDAC4-204ENST00000446876 SNAPC3Q92966 411 aa11.67□□□□□ -0.54
HDAC4-204ENST00000446876 SLC35D1Q9NTN3 355 aa11.67□□□□□ -0.54
HDAC4-204ENST00000446876 TSSC4Q9Y5U2 329 aaPredicted RBP11.67□□□□□ -0.54
HDAC4-204ENST00000446876 IGHV7-81A0A0B4J1V7 117 aa11.66□□□□□ -0.54
HDAC4-204ENST00000446876 RRHO14718 337 aa11.66□□□□□ -0.54
HDAC4-204ENST00000446876 ATP6V0E1O15342 81 aa11.66□□□□□ -0.54
HDAC4-204ENST00000446876 HLA-DRB1P01911 266 aa11.66□□□□□ -0.54
HDAC4-204ENST00000446876 OPN1MWP04001 364 aa11.66□□□□□ -0.54
HDAC4-204ENST00000446876 CTXN2P0C2S0 81 aa11.66□□□□□ -0.54
HDAC4-204ENST00000446876 OPN1MW2P0DN77 364 aa11.66□□□□□ -0.54
HDAC4-204ENST00000446876 OPN1MW3P0DN78 364 aa11.66□□□□□ -0.54
HDAC4-204ENST00000446876 RORCP51449 518 aa11.66□□□□□ -0.54
HDAC4-204ENST00000446876 NDPQ00604 133 aa11.66□□□□□ -0.54
HDAC4-204ENST00000446876 SPCS2Q15005 226 aa11.66□□□□□ -0.54
HDAC4-204ENST00000446876 PLGLAQ15195 96 aa11.66□□□□□ -0.54
HDAC4-204ENST00000446876 C18orf65Q6ZTR6 163 aa11.66□□□□□ -0.54
HDAC4-204ENST00000446876 PDPNQ86YL7 162 aa11.66□□□□□ -0.54
HDAC4-204ENST00000446876 PARP11Q9NR21 331 aa11.66□□□□□ -0.54
HDAC4-204ENST00000446876 TPSG1Q9NRR2 321 aa11.66□□□□□ -0.54
HDAC4-204ENST00000446876 GAB2Q9UQC2 676 aa11.66□□□□□ -0.54
HDAC4-204ENST00000446876 OR2W1Q9Y3N9 320 aa11.66□□□□□ -0.54
HDAC4-204ENST00000446876 LINC00473A8K010 186 aa11.65□□□□□ -0.54
HDAC4-204ENST00000446876 FCN1O00602 326 aa11.65□□□□□ -0.54
HDAC4-204ENST00000446876 RBBP9O75884 186 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms