RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 IGF2RP11717 2491 aa11.32□□□□□ -0.6
USP42-203ENST00000426246 CYTIPO60759 359 aa11.32□□□□□ -0.6
USP42-203ENST00000426246 DFFBO76075 338 aa11.32□□□□□ -0.6
USP42-203ENST00000426246 SOD3P08294 240 aa11.32□□□□□ -0.6
USP42-203ENST00000426246 GLIPR1P48060 266 aa11.32□□□□□ -0.6
USP42-203ENST00000426246 TAS2R30P59541 319 aa11.32□□□□□ -0.6
USP42-203ENST00000426246 B2MP61769 119 aa11.32□□□□□ -0.6
USP42-203ENST00000426246 IGF2-ASQ6U949 168 aa11.32□□□□□ -0.6
USP42-203ENST00000426246 WDYHV1Q96HA8 205 aa11.32□□□□□ -0.6
USP42-203ENST00000426246 REPIN1Q9BWE0 567 aaKnown RBP11.32□□□□□ -0.6
USP42-203ENST00000426246 FUT9Q9Y231 359 aa11.32□□□□□ -0.6
USP42-203ENST00000426246 MRPS18CQ9Y3D5 142 aaKnown RBP11.32□□□□□ -0.6
USP42-203ENST00000426246 NOTCH3Q9UM47 2321 aa11.31□□□□□ -0.6
USP42-203ENST00000426246 A0A1B0GUS0 222 aa11.31□□□□□ -0.6
USP42-203ENST00000426246 ZNF705FA8MVS1 300 aaPredicted RBP11.31□□□□□ -0.6
USP42-203ENST00000426246 PITX3O75364 302 aa11.31□□□□□ -0.6
USP42-203ENST00000426246 S1PR2O95136 353 aa11.31□□□□□ -0.6
USP42-203ENST00000426246 SCGB1D1O95968 90 aa11.31□□□□□ -0.6
USP42-203ENST00000426246 ZNF705DP0CH99 300 aaPredicted RBP11.31□□□□□ -0.6
USP42-203ENST00000426246 ZNF705BP0CI00 300 aaPredicted RBP11.31□□□□□ -0.6
USP42-203ENST00000426246 RNF224P0DH78 156 aa11.31□□□□□ -0.6
USP42-203ENST00000426246 GFRA1P56159 465 aa11.31□□□□□ -0.6
USP42-203ENST00000426246 TFF3Q07654 80 aa11.31□□□□□ -0.6
USP42-203ENST00000426246 MRPL30Q8TCC3 161 aaKnown RBP11.31□□□□□ -0.6
USP42-203ENST00000426246 HIST1H2BKO60814 126 aa11.31□□□□□ -0.6
USP42-203ENST00000426246 HBE1P02100 147 aa11.31□□□□□ -0.6
USP42-203ENST00000426246 HIST1H2BJP06899 126 aa11.31□□□□□ -0.6
USP42-203ENST00000426246 HIST1H2BOP23527 126 aa11.31□□□□□ -0.6
USP42-203ENST00000426246 CD82P27701 267 aa11.31□□□□□ -0.6
USP42-203ENST00000426246 HIST1H2BBP33778 126 aa11.31□□□□□ -0.6
USP42-203ENST00000426246 HIST1H2BDP58876 126 aa11.31□□□□□ -0.6
USP42-203ENST00000426246 HIST1H2BCP62807 126 aa11.31□□□□□ -0.6
USP42-203ENST00000426246 HIST2H2BEQ16778 126 aa11.31□□□□□ -0.6
USP42-203ENST00000426246 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.31□□□□□ -0.6
USP42-203ENST00000426246 DRAM1Q8N682 238 aa11.31□□□□□ -0.6
USP42-203ENST00000426246 HIST1H2BHQ93079 126 aa11.31□□□□□ -0.6
USP42-203ENST00000426246 HIST1H2BNQ99877 126 aa11.31□□□□□ -0.6
USP42-203ENST00000426246 HIST1H2BMQ99879 126 aa11.31□□□□□ -0.6
USP42-203ENST00000426246 KIAA1456Q9P272 454 aa11.31□□□□□ -0.6
USP42-203ENST00000426246 APELAP0DMC3 54 aa11.3□□□□□ -0.6
USP42-203ENST00000426246 LYL1P12980 280 aa11.3□□□□□ -0.6
USP42-203ENST00000426246 SOX8P57073 446 aa11.3□□□□□ -0.6
USP42-203ENST00000426246 PPP1CBP62140 327 aa11.3□□□□□ -0.6
USP42-203ENST00000426246 ELOBQ15370 118 aa11.3□□□□□ -0.6
USP42-203ENST00000426246 TBC1D28Q2M2D7 210 aa11.3□□□□□ -0.6
USP42-203ENST00000426246 KHDC3LQ587J8 217 aa11.3□□□□□ -0.6
USP42-203ENST00000426246 OR2Z1Q8NG97 314 aa11.3□□□□□ -0.6
USP42-203ENST00000426246 OR10G4Q8NGN3 311 aa11.3□□□□□ -0.6
USP42-203ENST00000426246 OR10G9Q8NGN4 311 aa11.3□□□□□ -0.6
USP42-203ENST00000426246 OR10G7Q8NGN6 311 aa11.3□□□□□ -0.6
USP42-203ENST00000426246 OR13D1Q8NGV5 346 aa11.3□□□□□ -0.6
USP42-203ENST00000426246 TUBA4BQ9H853 241 aa11.3□□□□□ -0.6
USP42-203ENST00000426246 SLC25A6P12236 298 aa11.3□□□□□ -0.6
USP42-203ENST00000426246 MDH2P40926 338 aaKnown RBP11.3□□□□□ -0.6
USP42-203ENST00000426246 PRB3Q04118 309 aaPredicted RBP11.3□□□□□ -0.6
USP42-203ENST00000426246 OR8B8Q15620 311 aa11.3□□□□□ -0.6
USP42-203ENST00000426246 RNF122Q9H9V4 155 aa11.3□□□□□ -0.6
USP42-203ENST00000426246 NCOR2Q9Y618 2525 aa11.3□□□□□ -0.6
USP42-203ENST00000426246 C1QTNF9BB2RNN3 333 aa11.3□□□□□ -0.6
USP42-203ENST00000426246 PPP5D1E7EU14 171 aa11.3□□□□□ -0.6
USP42-203ENST00000426246 SH2D1BO14796 132 aa11.3□□□□□ -0.6
USP42-203ENST00000426246 SMIM6P0DI80 62 aa11.3□□□□□ -0.6
USP42-203ENST00000426246 GNG10P50151 68 aa11.3□□□□□ -0.6
USP42-203ENST00000426246 MRPL49Q13405 166 aaKnown RBP11.3□□□□□ -0.6
USP42-203ENST00000426246 PRSS8Q16651 343 aa11.3□□□□□ -0.6
USP42-203ENST00000426246 CYB5R2Q6BCY4 276 aa11.3□□□□□ -0.6
USP42-203ENST00000426246 C16orf82Q7Z2V1 217 aa11.3□□□□□ -0.6
USP42-203ENST00000426246 COMMD1Q8N668 190 aa11.3□□□□□ -0.6
USP42-203ENST00000426246 RTL8AQ9BWD3 113 aa11.3□□□□□ -0.6
USP42-203ENST00000426246 ARV1Q9H2C2 271 aa11.3□□□□□ -0.6
USP42-203ENST00000426246 RALYQ9UKM9 306 aaKnown RBP11.3□□□□□ -0.6
USP42-203ENST00000426246 COL12A1Q99715 3063 aa11.3□□□□□ -0.6
USP42-203ENST00000426246 SMG1Q96Q15 3661 aaKnown RBP11.29□□□□□ -0.6
USP42-203ENST00000426246 CLDN34H7C241 214 aa11.29□□□□□ -0.6
USP42-203ENST00000426246 WT1P19544 449 aaPredicted RBP11.29□□□□□ -0.6
USP42-203ENST00000426246 PRAMEF5Q5TYX0 476 aa11.29□□□□□ -0.6
USP42-203ENST00000426246 OR10P1Q8NGE3 313 aa11.29□□□□□ -0.6
USP42-203ENST00000426246 GALMQ96C23 342 aa11.29□□□□□ -0.6
USP42-203ENST00000426246 METRNQ9UJH8 293 aa11.29□□□□□ -0.6
USP42-203ENST00000426246 ANAPC10Q9UM13 185 aa11.29□□□□□ -0.6
USP42-203ENST00000426246 TRGV5A0A0B4J1U4 118 aa11.29□□□□□ -0.6
USP42-203ENST00000426246 A0A1B0GV90 55 aa11.29□□□□□ -0.6
USP42-203ENST00000426246 C17orf98A8MV24 154 aa11.29□□□□□ -0.6
USP42-203ENST00000426246 SPRY3O43610 288 aa11.29□□□□□ -0.6
USP42-203ENST00000426246 PSPNO60542 156 aa11.29□□□□□ -0.6
USP42-203ENST00000426246 PSMB3P49720 205 aa11.29□□□□□ -0.6
USP42-203ENST00000426246 PDLIM3Q53GG5 364 aaPredicted RBP11.29□□□□□ -0.6
USP42-203ENST00000426246 FAM78BQ5VT40 261 aa11.29□□□□□ -0.6
USP42-203ENST00000426246 CLDND2Q8NHS1 167 aa11.29□□□□□ -0.6
USP42-203ENST00000426246 PINX1Q96BK5 328 aaKnown RBP11.29□□□□□ -0.6
USP42-203ENST00000426246 MUCL1Q96DR8 90 aa11.29□□□□□ -0.6
USP42-203ENST00000426246 PACRGQ96M98 296 aaPredicted RBP11.29□□□□□ -0.6
USP42-203ENST00000426246 OR51I2Q9H344 312 aa11.29□□□□□ -0.6
USP42-203ENST00000426246 ZNF703Q9H7S9 590 aaPredicted RBP11.29□□□□□ -0.6
USP42-203ENST00000426246 PQLC2LA1A4F0 135 aa11.29□□□□□ -0.6
USP42-203ENST00000426246 ZNF320A2RRD8 509 aa11.29□□□□□ -0.6
USP42-203ENST00000426246 LRP5LA4QPB2 252 aa11.29□□□□□ -0.6
USP42-203ENST00000426246 NKX2-8O15522 239 aa11.29□□□□□ -0.6
USP42-203ENST00000426246 BCL2P10415 239 aa11.29□□□□□ -0.6
USP42-203ENST00000426246 G0S2P27469 103 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 342.5 ms