RNA–Protein interactions for RNA: ENST00000409958.6

VSX1-204, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,305 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-204ENST00000409958 VWFP04275 2813 aa16.43■□□□□ 0.22
VSX1-204ENST00000409958 H0YJW9 148 aa16.43■□□□□ 0.22
VSX1-204ENST00000409958 OR8U9P0C7N5 309 aa16.43■□□□□ 0.22
VSX1-204ENST00000409958 MMDQ15546 238 aa16.43■□□□□ 0.22
VSX1-204ENST00000409958 OR5AN1Q8NGI8 311 aa16.43■□□□□ 0.22
VSX1-204ENST00000409958 OR8U1Q8NH10 309 aa16.43■□□□□ 0.22
VSX1-204ENST00000409958 MMP27Q9H306 513 aa16.43■□□□□ 0.22
VSX1-204ENST00000409958 CSF1P09603 554 aa16.42■□□□□ 0.22
VSX1-204ENST00000409958 CNIH2Q6PI25 160 aa16.42■□□□□ 0.22
VSX1-204ENST00000409958 GLDNQ6ZMI3 551 aaPredicted RBP16.42■□□□□ 0.22
VSX1-204ENST00000409958 NDUFA11Q86Y39 141 aa16.42■□□□□ 0.22
VSX1-204ENST00000409958 FOXRED2Q8IWF2 684 aa16.42■□□□□ 0.22
VSX1-204ENST00000409958 CHPT1Q8WUD6 406 aa16.42■□□□□ 0.22
VSX1-204ENST00000409958 RITA1Q96K30 269 aa16.42■□□□□ 0.22
VSX1-204ENST00000409958 CITED2Q99967 270 aaPredicted RBP16.42■□□□□ 0.22
VSX1-204ENST00000409958 OR2D2Q9H210 308 aa16.42■□□□□ 0.22
VSX1-204ENST00000409958 ANXA10Q9UJ72 324 aa16.42■□□□□ 0.22
VSX1-204ENST00000409958 WASHC3Q9Y3C0 194 aa16.42■□□□□ 0.22
VSX1-204ENST00000409958 KCNAB3O43448 404 aa16.41■□□□□ 0.22
VSX1-204ENST00000409958 TSPAN15O95858 294 aa16.41■□□□□ 0.22
VSX1-204ENST00000409958 RORCP51449 518 aa16.41■□□□□ 0.22
VSX1-204ENST00000409958 CD83Q01151 205 aa16.41■□□□□ 0.22
VSX1-204ENST00000409958 DRAXINQ8NBI3 349 aaPredicted RBP16.41■□□□□ 0.22
VSX1-204ENST00000409958 ACOT12Q8WYK0 555 aa16.41■□□□□ 0.22
VSX1-204ENST00000409958 CMTM3Q96MX0 182 aa16.41■□□□□ 0.22
VSX1-204ENST00000409958 RBM7Q9Y580 266 aaKnown RBP16.41■□□□□ 0.22
VSX1-204ENST00000409958 PSMB11A5LHX3 300 aa16.4■□□□□ 0.22
VSX1-204ENST00000409958 M0R1X1 148 aa16.4■□□□□ 0.22
VSX1-204ENST00000409958 NBR2O15453 112 aa16.4■□□□□ 0.22
VSX1-204ENST00000409958 RBBP9O75884 186 aa16.4■□□□□ 0.22
VSX1-204ENST00000409958 SOX6P35712 828 aa16.4■□□□□ 0.22
VSX1-204ENST00000409958 CBX5P45973 191 aa16.4■□□□□ 0.22
VSX1-204ENST00000409958 TMEM69Q5SWH9 247 aa16.4■□□□□ 0.22
VSX1-204ENST00000409958 HOGA1Q86XE5 327 aa16.4■□□□□ 0.22
VSX1-204ENST00000409958 NPBQ8NG41 125 aa16.4■□□□□ 0.22
VSX1-204ENST00000409958 OR4X2Q8NGF9 303 aa16.4■□□□□ 0.22
VSX1-204ENST00000409958 NOL4LQ96MY1 436 aaPredicted RBP16.4■□□□□ 0.22
VSX1-204ENST00000409958 RNF5Q99942 180 aa16.4■□□□□ 0.22
VSX1-204ENST00000409958 SDHAF2Q9NX18 166 aa16.4■□□□□ 0.22
VSX1-204ENST00000409958 COMMD3Q9UBI1 195 aa16.4■□□□□ 0.22
VSX1-204ENST00000409958 LINC01548A6NM66 108 aa16.39■□□□□ 0.21
VSX1-204ENST00000409958 H7C2Y5 167 aa16.39■□□□□ 0.21
VSX1-204ENST00000409958 AP4M1O00189 453 aa16.39■□□□□ 0.21
VSX1-204ENST00000409958 NDUFA3O95167 84 aa16.39■□□□□ 0.21
VSX1-204ENST00000409958 CNTFRP26992 372 aa16.39■□□□□ 0.21
VSX1-204ENST00000409958 TCTEX1D4Q5JR98 221 aa16.39■□□□□ 0.21
VSX1-204ENST00000409958 STPG2Q8N412 459 aa16.39■□□□□ 0.21
VSX1-204ENST00000409958 ZNF383Q8NA42 475 aa16.39■□□□□ 0.21
VSX1-204ENST00000409958 BEST4Q8NFU0 473 aa16.39■□□□□ 0.21
VSX1-204ENST00000409958 KIAA1456Q9P272 454 aa16.39■□□□□ 0.21
VSX1-204ENST00000409958 OR2W1Q9Y3N9 320 aa16.39■□□□□ 0.21
VSX1-204ENST00000409958 ADARB2-AS1A8MUL3 147 aa16.38■□□□□ 0.21
VSX1-204ENST00000409958 APOA1P02647 267 aa16.38■□□□□ 0.21
VSX1-204ENST00000409958 APOA2P02652 100 aa16.38■□□□□ 0.21
VSX1-204ENST00000409958 OPN1MWP04001 364 aa16.38■□□□□ 0.21
VSX1-204ENST00000409958 OPN1MW2P0DN77 364 aa16.38■□□□□ 0.21
VSX1-204ENST00000409958 OPN1MW3P0DN78 364 aa16.38■□□□□ 0.21
VSX1-204ENST00000409958 PTHLHP12272 177 aa16.38■□□□□ 0.21
VSX1-204ENST00000409958 TAS2R20P59543 309 aa16.38■□□□□ 0.21
VSX1-204ENST00000409958 C5orf64Q2M2E5 130 aa16.38■□□□□ 0.21
VSX1-204ENST00000409958 NSUN5P1Q3KNT7 163 aa16.38■□□□□ 0.21
VSX1-204ENST00000409958 C10orf99Q6UWK7 81 aa16.38■□□□□ 0.21
VSX1-204ENST00000409958 PDPNQ86YL7 162 aa16.38■□□□□ 0.21
VSX1-204ENST00000409958 GVQW1Q8N7I0 195 aa16.38■□□□□ 0.21
VSX1-204ENST00000409958 AP3S1Q92572 193 aa16.38■□□□□ 0.21
VSX1-204ENST00000409958 HSPB9Q9BQS6 159 aa16.38■□□□□ 0.21
VSX1-204ENST00000409958 ZNF107Q9UII5 783 aaPredicted RBP16.38■□□□□ 0.21
VSX1-204ENST00000409958 LINC00527Q9UJ94 153 aa16.38■□□□□ 0.21
VSX1-204ENST00000409958 CMYA5Q8N3K9 4069 aa16.37■□□□□ 0.21
VSX1-204ENST00000409958 HLA-DRB1P01911 266 aa16.37■□□□□ 0.21
VSX1-204ENST00000409958 EIF4EP06730 217 aaKnown RBP16.37■□□□□ 0.21
VSX1-204ENST00000409958 NFYAP23511 347 aaPredicted RBP16.37■□□□□ 0.21
VSX1-204ENST00000409958 LINC00205P59089 165 aa16.37■□□□□ 0.21
VSX1-204ENST00000409958 ARPC4P59998 168 aa16.37■□□□□ 0.21
VSX1-204ENST00000409958 SLC35B1P78383 322 aa16.37■□□□□ 0.21
VSX1-204ENST00000409958 ZNF329Q86UD4 541 aa16.37■□□□□ 0.21
VSX1-204ENST00000409958 C5orf30Q96GV9 206 aa16.37■□□□□ 0.21
VSX1-204ENST00000409958 TCRBV4S1A1TA0A5B7 111 aa16.36■□□□□ 0.21
VSX1-204ENST00000409958 HLA-DQB1P01920 261 aa16.36■□□□□ 0.21
VSX1-204ENST00000409958 ZNF182P17025 639 aaPredicted RBP16.36■□□□□ 0.21
VSX1-204ENST00000409958 RPL5P46777 297 aaKnown RBP16.36■□□□□ 0.21
VSX1-204ENST00000409958 LUMP51884 338 aaPredicted RBP16.36■□□□□ 0.21
VSX1-204ENST00000409958 TAGLNQ01995 201 aaKnown RBP16.36■□□□□ 0.21
VSX1-204ENST00000409958 MZT2AQ6P582 158 aa16.36■□□□□ 0.21
VSX1-204ENST00000409958 FAM110DQ8TAY7 271 aaPredicted RBP16.36■□□□□ 0.21
VSX1-204ENST00000409958 GON7Q9BXV9 100 aa16.36■□□□□ 0.21
VSX1-204ENST00000409958 SLC35D1Q9NTN3 355 aa16.36■□□□□ 0.21
VSX1-204ENST00000409958 ZNF580Q9UK33 172 aa16.36■□□□□ 0.21
VSX1-204ENST00000409958 TSSC4Q9Y5U2 329 aaPredicted RBP16.36■□□□□ 0.21
VSX1-204ENST00000409958 SMIM31A0A1B0GVY4 71 aa16.35■□□□□ 0.21
VSX1-204ENST00000409958 RRHO14718 337 aa16.35■□□□□ 0.21
VSX1-204ENST00000409958 TUSC2O75896 110 aa16.35■□□□□ 0.21
VSX1-204ENST00000409958 SLC22A5O76082 557 aa16.35■□□□□ 0.21
VSX1-204ENST00000409958 IGKV1-16P04430 117 aa16.35■□□□□ 0.21
VSX1-204ENST00000409958 IGF1P05019 195 aa16.35■□□□□ 0.21
VSX1-204ENST00000409958 THBS3P49746 956 aa16.35■□□□□ 0.21
VSX1-204ENST00000409958 LIN54Q6MZP7 749 aa16.35■□□□□ 0.21
VSX1-204ENST00000409958 CLVS1Q8IUQ0 354 aaPredicted RBP16.35■□□□□ 0.21
VSX1-204ENST00000409958 COMMD1Q8N668 190 aa16.35■□□□□ 0.21
VSX1-204ENST00000409958 ZNF645Q8N7E2 425 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms