RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 A0A0A6YYH2 397 aa7.79□□□□□ -1.16
CD48-202ENST00000368046 A6NJ64 397 aa7.79□□□□□ -1.16
CD48-202ENST00000368046 LINC01548A6NM66 108 aa7.79□□□□□ -1.16
CD48-202ENST00000368046 TSPAN15O95858 294 aa7.79□□□□□ -1.16
CD48-202ENST00000368046 OPN1MWP04001 364 aa7.79□□□□□ -1.16
CD48-202ENST00000368046 CTXN2P0C2S0 81 aa7.79□□□□□ -1.16
CD48-202ENST00000368046 OR8U9P0C7N5 309 aa7.79□□□□□ -1.16
CD48-202ENST00000368046 OPN1MW2P0DN77 364 aa7.79□□□□□ -1.16
CD48-202ENST00000368046 OPN1MW3P0DN78 364 aa7.79□□□□□ -1.16
CD48-202ENST00000368046 ACTBP60709 375 aa7.79□□□□□ -1.16
CD48-202ENST00000368046 NSUN5P1Q3KNT7 163 aa7.79□□□□□ -1.16
CD48-202ENST00000368046 RPL39P5Q59GN2 51 aa7.79□□□□□ -1.16
CD48-202ENST00000368046 HIST2H2BDQ6DRA6 164 aa7.79□□□□□ -1.16
CD48-202ENST00000368046 FOXRED2Q8IWF2 684 aa7.79□□□□□ -1.16
CD48-202ENST00000368046 FAM71E2Q8N5Q1 922 aa7.79□□□□□ -1.16
CD48-202ENST00000368046 NPBQ8NG41 125 aa7.79□□□□□ -1.16
CD48-202ENST00000368046 OR4X2Q8NGF9 303 aa7.79□□□□□ -1.16
CD48-202ENST00000368046 OR5AN1Q8NGI8 311 aa7.79□□□□□ -1.16
CD48-202ENST00000368046 OR13F1Q8NGS4 319 aa7.79□□□□□ -1.16
CD48-202ENST00000368046 OR8U1Q8NH10 309 aa7.79□□□□□ -1.16
CD48-202ENST00000368046 MAFIPQ8WZ33 124 aa7.79□□□□□ -1.16
CD48-202ENST00000368046 RBMXL1Q96E39 390 aaKnown RBP7.79□□□□□ -1.16
CD48-202ENST00000368046 S100A16Q96FQ6 103 aaKnown RBP7.79□□□□□ -1.16
CD48-202ENST00000368046 RITA1Q96K30 269 aa7.79□□□□□ -1.16
CD48-202ENST00000368046 RNF5Q99942 180 aa7.79□□□□□ -1.16
CD48-202ENST00000368046 CABLES2Q9BTV7 478 aa7.79□□□□□ -1.16
CD48-202ENST00000368046 FUNDC2Q9BWH2 189 aa7.79□□□□□ -1.16
CD48-202ENST00000368046 MGAM2Q2M2H8 2515 aa7.78□□□□□ -1.16
CD48-202ENST00000368046 TCRBV4S1A1TA0A5B7 111 aa7.78□□□□□ -1.16
CD48-202ENST00000368046 PSMB11A5LHX3 300 aa7.78□□□□□ -1.16
CD48-202ENST00000368046 TMEM235A6NFC5 223 aa7.78□□□□□ -1.16
CD48-202ENST00000368046 OR5H14A6NHG9 310 aa7.78□□□□□ -1.16
CD48-202ENST00000368046 AP4M1O00189 453 aa7.78□□□□□ -1.16
CD48-202ENST00000368046 KCNAB3O43448 404 aa7.78□□□□□ -1.16
CD48-202ENST00000368046 SOX6P35712 828 aa7.78□□□□□ -1.16
CD48-202ENST00000368046 TGFBR1P36897 503 aa7.78□□□□□ -1.16
CD48-202ENST00000368046 GPR12P47775 334 aa7.78□□□□□ -1.16
CD48-202ENST00000368046 GNG2P59768 71 aa7.78□□□□□ -1.16
CD48-202ENST00000368046 SLC35B1P78383 322 aa7.78□□□□□ -1.16
CD48-202ENST00000368046 MMDQ15546 238 aa7.78□□□□□ -1.16
CD48-202ENST00000368046 TCTEX1D4Q5JR98 221 aa7.78□□□□□ -1.16
CD48-202ENST00000368046 LIN54Q6MZP7 749 aa7.78□□□□□ -1.16
CD48-202ENST00000368046 STPG2Q8N412 459 aa7.78□□□□□ -1.16
CD48-202ENST00000368046 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.78□□□□□ -1.16
CD48-202ENST00000368046 OR4F17Q8NGA8 305 aa7.78□□□□□ -1.16
CD48-202ENST00000368046 SLC25A46Q96AG3 418 aa7.78□□□□□ -1.16
CD48-202ENST00000368046 R3HDM4Q96D70 268 aa7.78□□□□□ -1.16
CD48-202ENST00000368046 SLC25A38Q96DW6 304 aa7.78□□□□□ -1.16
CD48-202ENST00000368046 NOL4LQ96MY1 436 aaPredicted RBP7.78□□□□□ -1.16
CD48-202ENST00000368046 OR4F4Q96R69 305 aa7.78□□□□□ -1.16
CD48-202ENST00000368046 GINS4Q9BRT9 223 aa7.78□□□□□ -1.16
CD48-202ENST00000368046 GON7Q9BXV9 100 aa7.78□□□□□ -1.16
CD48-202ENST00000368046 TSSC4Q9Y5U2 329 aaPredicted RBP7.78□□□□□ -1.16
CD48-202ENST00000368046 IGKV1D-8A0A087WSZ0 117 aa7.77□□□□□ -1.17
CD48-202ENST00000368046 ADARB2-AS1A8MUL3 147 aa7.77□□□□□ -1.17
CD48-202ENST00000368046 H0YJW9 148 aa7.77□□□□□ -1.17
CD48-202ENST00000368046 H7C2Y5 167 aa7.77□□□□□ -1.17
CD48-202ENST00000368046 NBR2O15453 112 aa7.77□□□□□ -1.17
CD48-202ENST00000368046 SSX5O60225 188 aa7.77□□□□□ -1.17
CD48-202ENST00000368046 RBBP9O75884 186 aa7.77□□□□□ -1.17
CD48-202ENST00000368046 IGF1P05019 195 aa7.77□□□□□ -1.17
CD48-202ENST00000368046 TFAP2AP05549 437 aa7.77□□□□□ -1.17
CD48-202ENST00000368046 CNTFRP26992 372 aa7.77□□□□□ -1.17
CD48-202ENST00000368046 VBP1P61758 197 aa7.77□□□□□ -1.17
CD48-202ENST00000368046 CNIH2Q6PI25 160 aa7.77□□□□□ -1.17
CD48-202ENST00000368046 C10orf99Q6UWK7 81 aa7.77□□□□□ -1.17
CD48-202ENST00000368046 GLDNQ6ZMI3 551 aaPredicted RBP7.77□□□□□ -1.17
CD48-202ENST00000368046 ZNF329Q86UD4 541 aa7.77□□□□□ -1.17
CD48-202ENST00000368046 ANKRD13BQ86YJ7 626 aa7.77□□□□□ -1.17
CD48-202ENST00000368046 COMMD1Q8N668 190 aa7.77□□□□□ -1.17
CD48-202ENST00000368046 DRAXINQ8NBI3 349 aaPredicted RBP7.77□□□□□ -1.17
CD48-202ENST00000368046 NUDCD2Q8WVJ2 157 aa7.77□□□□□ -1.17
CD48-202ENST00000368046 AUNIPQ9H7T9 357 aa7.77□□□□□ -1.17
CD48-202ENST00000368046 ZFP57Q9NU63 452 aa7.77□□□□□ -1.17
CD48-202ENST00000368046 KIAA1456Q9P272 454 aa7.77□□□□□ -1.17
CD48-202ENST00000368046 ANXA10Q9UJ72 324 aa7.77□□□□□ -1.17
CD48-202ENST00000368046 LINC00527Q9UJ94 153 aa7.77□□□□□ -1.17
CD48-202ENST00000368046 WASHC3Q9Y3C0 194 aa7.77□□□□□ -1.17
CD48-202ENST00000368046 RBM7Q9Y580 266 aaKnown RBP7.77□□□□□ -1.17
CD48-202ENST00000368046 VWFP04275 2813 aa7.76□□□□□ -1.17
CD48-202ENST00000368046 XRCC3O43542 346 aa7.76□□□□□ -1.17
CD48-202ENST00000368046 NDUFA3O95167 84 aa7.76□□□□□ -1.17
CD48-202ENST00000368046 HLA-DRB1P01911 266 aa7.76□□□□□ -1.17
CD48-202ENST00000368046 SMIM18P0DKX4 95 aa7.76□□□□□ -1.17
CD48-202ENST00000368046 LINC00205P59089 165 aa7.76□□□□□ -1.17
CD48-202ENST00000368046 NCS1P62166 190 aa7.76□□□□□ -1.17
CD48-202ENST00000368046 RPS16P62249 146 aaKnown RBP7.76□□□□□ -1.17
CD48-202ENST00000368046 TAGLNQ01995 201 aaKnown RBP7.76□□□□□ -1.17
CD48-202ENST00000368046 C5orf64Q2M2E5 130 aa7.76□□□□□ -1.17
CD48-202ENST00000368046 TEX38Q6PEX7 206 aa7.76□□□□□ -1.17
CD48-202ENST00000368046 FAM131AQ6UXB0 335 aa7.76□□□□□ -1.17
CD48-202ENST00000368046 H1FOOQ8IZA3 346 aaPredicted RBP7.76□□□□□ -1.17
CD48-202ENST00000368046 ZNF383Q8NA42 475 aa7.76□□□□□ -1.17
CD48-202ENST00000368046 CMTM3Q96MX0 182 aa7.76□□□□□ -1.17
CD48-202ENST00000368046 HSPB9Q9BQS6 159 aa7.76□□□□□ -1.17
CD48-202ENST00000368046 MRPS26Q9BYN8 205 aaKnown RBP7.76□□□□□ -1.17
CD48-202ENST00000368046 OR2D2Q9H210 308 aa7.76□□□□□ -1.17
CD48-202ENST00000368046 SDHAF2Q9NX18 166 aa7.76□□□□□ -1.17
CD48-202ENST00000368046 ZNF107Q9UII5 783 aaPredicted RBP7.76□□□□□ -1.17
CD48-202ENST00000368046 ZNF580Q9UK33 172 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms