RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 PecrQ99MZ7 303 aa8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 SdhbQ9CQA3 282 aa8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 PsenenQ9CQR7 101 aa8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Eef1akmt1Q9CY45 214 aa8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Ssbp1Q9CYR0 152 aaKnown RBP8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Tssc4Q9JHE7 317 aa8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Tspan32Q9JHH2 256 aa8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Nit2Q9JHW2 276 aa8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Cln8Q9QUK3 288 aa8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Dnajb12Q9QYI4 376 aaKnown RBP8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Trex2Q9R1A9 236 aa8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Kcne3Q9WTW2 103 aa8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Olfr576A0A0G2JFH3 312 aa8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Igkv12-44A0A140T8M2 115 aa8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Fam90a1aA2A4E2 429 aa8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Cldn34dA2AGU5 210 aa8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Olfr891E9Q843 316 aa8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 SncaO55042 140 aaKnown RBP8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Ifna2P01573 190 aa8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Ren1P06281 402 aa8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 CatP24270 527 aa8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Gm10392Q3V3I3 114 aa8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 BC100530Q497J0 97 aa8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 NmsQ5H8A1 153 aa8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Trp53rkaQ5U452 244 aa8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Prg2Q61878 223 aa8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Sat2Q6P8J2 170 aa8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Prss54Q7M756 383 aa8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Npas4Q8BGD7 802 aa8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Zfp3Q8BLB0 497 aa8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Vrk3Q8K3G5 453 aa8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Mmd2Q8R189 247 aa8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 CmblQ8R1G2 245 aa8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Olfr509Q8VF20 321 aa8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Fam69bQ99ML4 431 aa8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Tp53rkQ99PW4 244 aa8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Rnase6Q9D244 153 aa8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Urm1Q9D2P4 101 aa8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Olfr951Q9EQ94 314 aa8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Herpud2Q9JJC9 404 aa8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Adam18Q9R157 719 aa8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Cx3cr1Q9Z0D9 354 aa8.53□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Trav12-2A0N8N6 114 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Olfr601A2RS33 314 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Vmn1r173E9Q8V7 313 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Gm10638F6QEG2 257 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 P01800 113 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Csf3P09920 208 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 MdkP12025 140 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Vipr2P41588 437 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 ElnP54320 860 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Adamts15P59384 950 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 UbdP63072 162 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 ShbQ6PD21 503 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Pramel5Q7TPY4 500 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Olfr871Q7TRF0 311 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Rab38Q8QZZ8 211 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 D8Ertd738eQ8R1F0 94 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Zfyve21Q8VCM3 234 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Olfr969Q8VG89 311 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Olfr1258Q8VGN6 311 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Olfr1257Q8VGP0 309 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Cds2Q99L43 444 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Anapc16Q9CPV2 110 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Olfr972Q9EQA2 314 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Akip1Q9JJR5 212 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Jag2Q9QYE5 1247 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Olfr157Q9QZ20 318 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Chst4Q9R1I1 388 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Trav15d-1-dv6d-1A0A075B624 124 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Olfr1438-ps1A0A140LHS9 319 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Olfr560A0A1B0GSU5 314 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Znf551B2RUI1 696 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Olfr869E9PX82 323 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Gm10203F6QJ09 66 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Hes2O54792 157 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Hmga1P17095 107 aaKnown RBP8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Egr3P43300 387 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Ier3P46694 153 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Plxna2P70207 1894 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 OmgQ63912 440 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Sp110Q8BVK9 445 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Olfr646Q8VGW2 312 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Gpx4Q91XR9 253 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Chchd1Q9CQA6 118 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Btf3l4Q9CQH7 158 aaKnown RBP8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Asb5Q9D1A4 329 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 9130008F23RikQ9D2Z6 181 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Ly6iQ9WU67 134 aa8.52□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 SisF8VQM5 1818 aa8.51□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Eid2bE9Q2Y0 151 aa8.51□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Gm17067E9Q6S4 354 aa8.51□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 C2cd4aE9Q861 334 aa8.51□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 EllO08856 602 aa8.51□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Sigmar1O55242 223 aa8.51□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Emc8O70378 207 aa8.51□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Cldn1O88551 211 aa8.51□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Rpl18P35980 188 aaKnown RBP8.51□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Rps4xP62702 263 aaKnown RBP8.51□□□□□ -1.05
Hmgb1-201ENSMUST00000085546 Olfr1507Q0VEP0 313 aa8.51□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 35.6 ms