Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29,26■■■□□ 2,28
Trav15d-1-dv6d-1A0A075B624 Gm25239-201ENSMUST00000174915 86 ntBASIC29,22■■■□□ 2,27
Trav15d-1-dv6d-1A0A075B624 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28,28■■■□□ 2,12
Trav15d-1-dv6d-1A0A075B624 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28,27■■■□□ 2,12
Trav15d-1-dv6d-1A0A075B624 Psd-208ENSMUST00000224556 2034 ntBASIC27,36■■□□□ 1,97
Trav15d-1-dv6d-1A0A075B624 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26,94■■□□□ 1,9
Trav15d-1-dv6d-1A0A075B624 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26,76■■□□□ 1,87
Trav15d-1-dv6d-1A0A075B624 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26,64■■□□□ 1,86
Trav15d-1-dv6d-1A0A075B624 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC26,63■■□□□ 1,85
Trav15d-1-dv6d-1A0A075B624 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC26,42■■□□□ 1,82
Trav15d-1-dv6d-1A0A075B624 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26,39■■□□□ 1,82
Trav15d-1-dv6d-1A0A075B624 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26,38■■□□□ 1,81
Trav15d-1-dv6d-1A0A075B624 Gm15042-201ENSMUST00000120212 883 ntBASIC26,35■■□□□ 1,81
Trav15d-1-dv6d-1A0A075B624 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26,3■■□□□ 1,8
Trav15d-1-dv6d-1A0A075B624 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26,18■■□□□ 1,78
Trav15d-1-dv6d-1A0A075B624 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26,13■■□□□ 1,77
Trav15d-1-dv6d-1A0A075B624 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26,11■■□□□ 1,77
Trav15d-1-dv6d-1A0A075B624 Gm15045-201ENSMUST00000117359 883 ntBASIC25,86■■□□□ 1,73
Trav15d-1-dv6d-1A0A075B624 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25,79■■□□□ 1,72
Trav15d-1-dv6d-1A0A075B624 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25,74■■□□□ 1,71
Trav15d-1-dv6d-1A0A075B624 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25,6■■□□□ 1,69
Trav15d-1-dv6d-1A0A075B624 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25,54■■□□□ 1,68
Trav15d-1-dv6d-1A0A075B624 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25,48■■□□□ 1,67
Trav15d-1-dv6d-1A0A075B624 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25,37■■□□□ 1,65
Trav15d-1-dv6d-1A0A075B624 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25,35■■□□□ 1,65
Trav15d-1-dv6d-1A0A075B624 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25,32■■□□□ 1,64
Trav15d-1-dv6d-1A0A075B624 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25,32■■□□□ 1,64
Trav15d-1-dv6d-1A0A075B624 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25,3■■□□□ 1,64
Trav15d-1-dv6d-1A0A075B624 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25,29■■□□□ 1,64
Trav15d-1-dv6d-1A0A075B624 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC25,28■■□□□ 1,64
Trav15d-1-dv6d-1A0A075B624 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25,26■■□□□ 1,63
Trav15d-1-dv6d-1A0A075B624 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25,22■■□□□ 1,63
Trav15d-1-dv6d-1A0A075B624 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25,18■■□□□ 1,62
Trav15d-1-dv6d-1A0A075B624 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25,17■■□□□ 1,62
Trav15d-1-dv6d-1A0A075B624 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25,03■■□□□ 1,6
Trav15d-1-dv6d-1A0A075B624 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25,01■■□□□ 1,59
Trav15d-1-dv6d-1A0A075B624 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24,99■■□□□ 1,59
Trav15d-1-dv6d-1A0A075B624 Gm24109-201ENSMUST00000175489 103 ntBASIC24,93■■□□□ 1,58
Trav15d-1-dv6d-1A0A075B624 Gm10524-201ENSMUST00000181931 1893 ntBASIC24,89■■□□□ 1,58
Trav15d-1-dv6d-1A0A075B624 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24,82■■□□□ 1,56
Trav15d-1-dv6d-1A0A075B624 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24,81■■□□□ 1,56
Trav15d-1-dv6d-1A0A075B624 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC24,8■■□□□ 1,56
Trav15d-1-dv6d-1A0A075B624 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC24,61■■□□□ 1,53
Trav15d-1-dv6d-1A0A075B624 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24,61■■□□□ 1,53
Trav15d-1-dv6d-1A0A075B624 Gm23366-201ENSMUST00000175022 89 ntBASIC24,56■■□□□ 1,52
Trav15d-1-dv6d-1A0A075B624 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24,5■■□□□ 1,51
Trav15d-1-dv6d-1A0A075B624 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC24,48■■□□□ 1,51
Trav15d-1-dv6d-1A0A075B624 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24,44■■□□□ 1,5
Trav15d-1-dv6d-1A0A075B624 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24,43■■□□□ 1,5
Trav15d-1-dv6d-1A0A075B624 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC24,37■■□□□ 1,49
Trav15d-1-dv6d-1A0A075B624 Gm42596-201ENSMUST00000196305 1958 ntBASIC24,36■■□□□ 1,49
Trav15d-1-dv6d-1A0A075B624 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC24,34■■□□□ 1,49
Trav15d-1-dv6d-1A0A075B624 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24,3■■□□□ 1,48
Trav15d-1-dv6d-1A0A075B624 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24,28■■□□□ 1,48
Trav15d-1-dv6d-1A0A075B624 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24,24■■□□□ 1,47
Trav15d-1-dv6d-1A0A075B624 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24,23■■□□□ 1,47
Trav15d-1-dv6d-1A0A075B624 AC153911.1-202ENSMUST00000218534 1034 ntBASIC24,2■■□□□ 1,46
Trav15d-1-dv6d-1A0A075B624 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24,19■■□□□ 1,46
Trav15d-1-dv6d-1A0A075B624 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24,17■■□□□ 1,46
Trav15d-1-dv6d-1A0A075B624 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24,16■■□□□ 1,46
Trav15d-1-dv6d-1A0A075B624 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC24,16■■□□□ 1,46
Trav15d-1-dv6d-1A0A075B624 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24,14■■□□□ 1,45
Trav15d-1-dv6d-1A0A075B624 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24,14■■□□□ 1,45
Trav15d-1-dv6d-1A0A075B624 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24,09■■□□□ 1,45
Trav15d-1-dv6d-1A0A075B624 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24,07■■□□□ 1,44
Trav15d-1-dv6d-1A0A075B624 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24,01■■□□□ 1,43
Trav15d-1-dv6d-1A0A075B624 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23,99■■□□□ 1,43
Trav15d-1-dv6d-1A0A075B624 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC23,98■■□□□ 1,43
Trav15d-1-dv6d-1A0A075B624 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23,97■■□□□ 1,43
Trav15d-1-dv6d-1A0A075B624 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC23,94■■□□□ 1,42
Trav15d-1-dv6d-1A0A075B624 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC23,92■■□□□ 1,42
Trav15d-1-dv6d-1A0A075B624 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23,9■■□□□ 1,42
Trav15d-1-dv6d-1A0A075B624 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23,87■■□□□ 1,41
Trav15d-1-dv6d-1A0A075B624 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC23,87■■□□□ 1,41
Trav15d-1-dv6d-1A0A075B624 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23,83■■□□□ 1,41
Trav15d-1-dv6d-1A0A075B624 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC23,75■■□□□ 1,39
Trav15d-1-dv6d-1A0A075B624 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC23,75■■□□□ 1,39
Trav15d-1-dv6d-1A0A075B624 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23,71■■□□□ 1,39
Trav15d-1-dv6d-1A0A075B624 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23,7■■□□□ 1,38
Trav15d-1-dv6d-1A0A075B624 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23,62■■□□□ 1,37
Trav15d-1-dv6d-1A0A075B624 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23,6■■□□□ 1,37
Trav15d-1-dv6d-1A0A075B624 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC23,6■■□□□ 1,37
Trav15d-1-dv6d-1A0A075B624 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC23,57■■□□□ 1,36
Trav15d-1-dv6d-1A0A075B624 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC23,55■■□□□ 1,36
Trav15d-1-dv6d-1A0A075B624 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC23,54■■□□□ 1,36
Trav15d-1-dv6d-1A0A075B624 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23,49■■□□□ 1,35
Trav15d-1-dv6d-1A0A075B624 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC23,46■■□□□ 1,35
Trav15d-1-dv6d-1A0A075B624 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23,45■■□□□ 1,34
Trav15d-1-dv6d-1A0A075B624 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC23,4■■□□□ 1,34
Trav15d-1-dv6d-1A0A075B624 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC23,37■■□□□ 1,33
Trav15d-1-dv6d-1A0A075B624 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC23,36■■□□□ 1,33
Trav15d-1-dv6d-1A0A075B624 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23,36■■□□□ 1,33
Trav15d-1-dv6d-1A0A075B624 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC23,35■■□□□ 1,33
Trav15d-1-dv6d-1A0A075B624 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC23,33■■□□□ 1,33
Trav15d-1-dv6d-1A0A075B624 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC23,32■■□□□ 1,32
Trav15d-1-dv6d-1A0A075B624 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23,31■■□□□ 1,32
Trav15d-1-dv6d-1A0A075B624 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23,31■■□□□ 1,32
Trav15d-1-dv6d-1A0A075B624 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23,3■■□□□ 1,32
Trav15d-1-dv6d-1A0A075B624 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23,27■■□□□ 1,32
Trav15d-1-dv6d-1A0A075B624 Gm27325-201ENSMUST00000175467 74 ntBASIC23,22■■□□□ 1,31
Retrieved 100 of 76,532 protein–RNA pairs in 13,1 ms