RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	SCT	P09683	121 aa		10.5	□□□□□ -0.73
SREBF1-223	ENST00000584760	HIST1H1D	P16402	221 aa	Known RBP	10.5	□□□□□ -0.73
SREBF1-223	ENST00000584760	GPR12	P47775	334 aa		10.5	□□□□□ -0.73
SREBF1-223	ENST00000584760	F2RL1	P55085	397 aa		10.5	□□□□□ -0.73
SREBF1-223	ENST00000584760	OR10R2	Q8NGX6	335 aa		10.5	□□□□□ -0.73
SREBF1-223	ENST00000584760	R3HDM4	Q96D70	268 aa		10.5	□□□□□ -0.73
SREBF1-223	ENST00000584760	AGMAT	Q9BSE5	352 aa		10.5	□□□□□ -0.73
SREBF1-223	ENST00000584760	NECAP2	Q9NVZ3	263 aa		10.5	□□□□□ -0.73
SREBF1-223	ENST00000584760	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	10.5	□□□□□ -0.73
SREBF1-223	ENST00000584760	PIPOX	Q9P0Z9	390 aa		10.5	□□□□□ -0.73
SREBF1-223	ENST00000584760	SSR3	Q9UNL2	185 aa		10.5	□□□□□ -0.73
SREBF1-223	ENST00000584760	TSSC4	Q9Y5U2	329 aa	Predicted RBP	10.5	□□□□□ -0.73
SREBF1-223	ENST00000584760		A0A1W2PRX2	142 aa		10.49	□□□□□ -0.73
SREBF1-223	ENST00000584760	TCRBV4S1A1T	A0A5B7	111 aa		10.49	□□□□□ -0.73
SREBF1-223	ENST00000584760	LINC01548	A6NM66	108 aa		10.49	□□□□□ -0.73
SREBF1-223	ENST00000584760	SERPINE3	A8MV23	424 aa		10.49	□□□□□ -0.73
SREBF1-223	ENST00000584760	RAB29	O14966	203 aa		10.49	□□□□□ -0.73
SREBF1-223	ENST00000584760	FCGR3A	P08637	254 aa		10.49	□□□□□ -0.73
SREBF1-223	ENST00000584760	GNB3	P16520	340 aa		10.49	□□□□□ -0.73
SREBF1-223	ENST00000584760	ZBTB25	P24278	435 aa		10.49	□□□□□ -0.73
SREBF1-223	ENST00000584760	GADD45A	P24522	165 aa		10.49	□□□□□ -0.73
SREBF1-223	ENST00000584760	ZNF329	Q86UD4	541 aa		10.49	□□□□□ -0.73
SREBF1-223	ENST00000584760	TPRA1	Q86W33	373 aa		10.49	□□□□□ -0.73
SREBF1-223	ENST00000584760	FOXRED2	Q8IWF2	684 aa		10.49	□□□□□ -0.73
SREBF1-223	ENST00000584760	STPG2	Q8N412	459 aa		10.49	□□□□□ -0.73
SREBF1-223	ENST00000584760	CHPT1	Q8WUD6	406 aa		10.49	□□□□□ -0.73
SREBF1-223	ENST00000584760	EDARADD	Q8WWZ3	215 aa		10.49	□□□□□ -0.73
SREBF1-223	ENST00000584760	HSPB9	Q9BQS6	159 aa		10.49	□□□□□ -0.73
SREBF1-223	ENST00000584760	CHCHD6	Q9BRQ6	235 aa		10.49	□□□□□ -0.73
SREBF1-223	ENST00000584760	NOTCH3	Q9UM47	2321 aa		10.49	□□□□□ -0.73
SREBF1-223	ENST00000584760	TRDC	B7Z8K6	153 aa		10.48	□□□□□ -0.73
SREBF1-223	ENST00000584760	AP4M1	O00189	453 aa		10.48	□□□□□ -0.73
SREBF1-223	ENST00000584760	CD3G	P09693	182 aa		10.48	□□□□□ -0.73
SREBF1-223	ENST00000584760	CD36	P16671	472 aa		10.48	□□□□□ -0.73
SREBF1-223	ENST00000584760	SDC2	P34741	201 aa		10.48	□□□□□ -0.73
SREBF1-223	ENST00000584760	ACTB	P60709	375 aa		10.48	□□□□□ -0.73
SREBF1-223	ENST00000584760	RPL39P5	Q59GN2	51 aa		10.48	□□□□□ -0.73
SREBF1-223	ENST00000584760	SFXN4	Q6P4A7	337 aa		10.48	□□□□□ -0.73
SREBF1-223	ENST00000584760	OR4A4P	Q8NGN8	299 aa		10.48	□□□□□ -0.73
SREBF1-223	ENST00000584760	LGALS14	Q8TCE9	139 aa		10.48	□□□□□ -0.73
SREBF1-223	ENST00000584760	ABHD14B	Q96IU4	210 aa		10.48	□□□□□ -0.73
SREBF1-223	ENST00000584760	KCTD7	Q96MP8	289 aa		10.48	□□□□□ -0.73
SREBF1-223	ENST00000584760	CABLES2	Q9BTV7	478 aa		10.48	□□□□□ -0.73
SREBF1-223	ENST00000584760	C11orf54	Q9H0W9	315 aa	Predicted RBP	10.48	□□□□□ -0.73
SREBF1-223	ENST00000584760	RNF167	Q9H6Y7	350 aa		10.48	□□□□□ -0.73
SREBF1-223	ENST00000584760	LINC00527	Q9UJ94	153 aa		10.48	□□□□□ -0.73
SREBF1-223	ENST00000584760	KMT2C	Q8NEZ4	4911 aa	Known RBP	10.48	□□□□□ -0.73
SREBF1-223	ENST00000584760		A0A075B6Q4	140 aa		10.47	□□□□□ -0.73
SREBF1-223	ENST00000584760	METTL21EP	A6NDL7	271 aa		10.47	□□□□□ -0.73
SREBF1-223	ENST00000584760	FABP7	O15540	132 aa		10.47	□□□□□ -0.73
SREBF1-223	ENST00000584760	HSPA12A	O43301	675 aa		10.47	□□□□□ -0.73
SREBF1-223	ENST00000584760	CT45A6	P0DMU7	189 aa		10.47	□□□□□ -0.73
SREBF1-223	ENST00000584760	CT45A5	P0DMU8	189 aa		10.47	□□□□□ -0.73
SREBF1-223	ENST00000584760	CT45A7	P0DMV0	189 aa		10.47	□□□□□ -0.73
SREBF1-223	ENST00000584760	PF4V1	P10720	104 aa		10.47	□□□□□ -0.73
SREBF1-223	ENST00000584760	CNTFR	P26992	372 aa		10.47	□□□□□ -0.73
SREBF1-223	ENST00000584760	SOX6	P35712	828 aa		10.47	□□□□□ -0.73
SREBF1-223	ENST00000584760	CEACAM6	P40199	344 aa		10.47	□□□□□ -0.73
SREBF1-223	ENST00000584760	MRPS15	P82914	257 aa	Known RBP	10.47	□□□□□ -0.73
SREBF1-223	ENST00000584760	MMD	Q15546	238 aa		10.47	□□□□□ -0.73
SREBF1-223	ENST00000584760	KHDC1L	Q5JSQ8	128 aa		10.47	□□□□□ -0.73
SREBF1-223	ENST00000584760	FAM131A	Q6UXB0	335 aa		10.47	□□□□□ -0.73
SREBF1-223	ENST00000584760	RITA1	Q96K30	269 aa		10.47	□□□□□ -0.73
SREBF1-223	ENST00000584760	RASL11B	Q9BPW5	248 aa		10.47	□□□□□ -0.73
SREBF1-223	ENST00000584760	CENPO	Q9BU64	300 aa		10.47	□□□□□ -0.73
SREBF1-223	ENST00000584760	TOLLIP	Q9H0E2	274 aa		10.47	□□□□□ -0.73
SREBF1-223	ENST00000584760	ATG5	Q9H1Y0	275 aa		10.47	□□□□□ -0.73
SREBF1-223	ENST00000584760	GHITM	Q9H3K2	345 aa		10.47	□□□□□ -0.73
SREBF1-223	ENST00000584760	DAPK2	Q9UIK4	370 aa		10.47	□□□□□ -0.73
SREBF1-223	ENST00000584760	LOC100506127	A0A0U1RQW1	187 aa		10.46	□□□□□ -0.73
SREBF1-223	ENST00000584760	OR5H14	A6NHG9	310 aa		10.46	□□□□□ -0.73
SREBF1-223	ENST00000584760	NBR2	O15453	112 aa		10.46	□□□□□ -0.73
SREBF1-223	ENST00000584760	PROP1	O75360	226 aa		10.46	□□□□□ -0.73
SREBF1-223	ENST00000584760	DIRAS3	O95661	229 aa		10.46	□□□□□ -0.73
SREBF1-223	ENST00000584760	SNRPB	P14678	240 aa	Known RBP	10.46	□□□□□ -0.73
SREBF1-223	ENST00000584760	SERPINB10	P48595	397 aa		10.46	□□□□□ -0.73
SREBF1-223	ENST00000584760	RPL23A	P62750	156 aa	Known RBP	10.46	□□□□□ -0.73
SREBF1-223	ENST00000584760	SLC35B1	P78383	322 aa		10.46	□□□□□ -0.73
SREBF1-223	ENST00000584760	CFHR3	Q02985	330 aa		10.46	□□□□□ -0.73
SREBF1-223	ENST00000584760	MXD1	Q05195	221 aa		10.46	□□□□□ -0.73
SREBF1-223	ENST00000584760	KIR2DS1	Q14954	304 aa		10.46	□□□□□ -0.73
SREBF1-223	ENST00000584760	SRSF7	Q16629	238 aa	Known RBP eCLIP	10.46	□□□□□ -0.73
SREBF1-223	ENST00000584760	C11orf87	Q6NUJ2	197 aa		10.46	□□□□□ -0.73
SREBF1-223	ENST00000584760	COMMD1	Q8N668	190 aa		10.46	□□□□□ -0.73
SREBF1-223	ENST00000584760	NPB	Q8NG41	125 aa		10.46	□□□□□ -0.73
SREBF1-223	ENST00000584760	MAFIP	Q8WZ33	124 aa		10.46	□□□□□ -0.73
SREBF1-223	ENST00000584760	PHF21A	Q96BD5	680 aa		10.46	□□□□□ -0.73
SREBF1-223	ENST00000584760	RDH8	Q9NYR8	311 aa		10.46	□□□□□ -0.73
SREBF1-223	ENST00000584760	ZNF230	Q9UIE0	474 aa	Predicted RBP	10.46	□□□□□ -0.73
SREBF1-223	ENST00000584760	ZNF580	Q9UK33	172 aa		10.46	□□□□□ -0.73
SREBF1-223	ENST00000584760	ELF5	Q9UKW6	265 aa	Predicted RBP	10.46	□□□□□ -0.73
SREBF1-223	ENST00000584760	DNAH3	Q8TD57	4116 aa		10.46	□□□□□ -0.74
SREBF1-223	ENST00000584760	TRBV6-7	A0A0A0MS04	114 aa		10.45	□□□□□ -0.74
SREBF1-223	ENST00000584760		H0YJW9	148 aa		10.45	□□□□□ -0.74
SREBF1-223	ENST00000584760	NDUFA3	O95167	84 aa		10.45	□□□□□ -0.74
SREBF1-223	ENST00000584760	TNFAIP8	O95379	198 aa		10.45	□□□□□ -0.74
SREBF1-223	ENST00000584760	HLA-DRB1	P01911	266 aa		10.45	□□□□□ -0.74
SREBF1-223	ENST00000584760	IGF1	P05019	195 aa		10.45	□□□□□ -0.74
SREBF1-223	ENST00000584760	CLEC2L	P0C7M8	214 aa		10.45	□□□□□ -0.74
SREBF1-223	ENST00000584760	GSTT2	P0CG29	244 aa		10.45	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms