RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 ALKAL2Q6UX46 152 aa14.25□□□□□ -0.13
LTBR-207ENST00000539925 FOXRED2Q8IWF2 684 aa14.25□□□□□ -0.13
LTBR-207ENST00000539925 BAP18Q8IXM2 172 aa14.25□□□□□ -0.13
LTBR-207ENST00000539925 RFESDQ8TAC1 157 aa14.25□□□□□ -0.13
LTBR-207ENST00000539925 RAB39BQ96DA2 213 aa14.25□□□□□ -0.13
LTBR-207ENST00000539925 PARP12Q9H0J9 701 aaKnown RBP14.25□□□□□ -0.13
LTBR-207ENST00000539925 GAL3ST2Q9H3Q3 398 aa14.25□□□□□ -0.13
LTBR-207ENST00000539925 DEFB108AA8MXU0 73 aa14.24□□□□□ -0.13
LTBR-207ENST00000539925 WRBO00258 174 aa14.24□□□□□ -0.13
LTBR-207ENST00000539925 JTBO76095 146 aa14.24□□□□□ -0.13
LTBR-207ENST00000539925 CLDN14O95500 239 aa14.24□□□□□ -0.13
LTBR-207ENST00000539925 GPR12P47775 334 aa14.24□□□□□ -0.13
LTBR-207ENST00000539925 AKR1C2P52895 323 aa14.24□□□□□ -0.13
LTBR-207ENST00000539925 HFEQ30201 348 aa14.24□□□□□ -0.13
LTBR-207ENST00000539925 LRRC10Q5BKY1 277 aa14.24□□□□□ -0.13
LTBR-207ENST00000539925 CCL17Q92583 94 aa14.24□□□□□ -0.13
LTBR-207ENST00000539925 AGMATQ9BSE5 352 aa14.24□□□□□ -0.13
LTBR-207ENST00000539925 SLC25A31Q9H0C2 315 aa14.24□□□□□ -0.13
LTBR-207ENST00000539925 COA4Q9NYJ1 87 aa14.24□□□□□ -0.13
LTBR-207ENST00000539925 SLC25A10Q9UBX3 287 aaPredicted RBP14.24□□□□□ -0.13
LTBR-207ENST00000539925 AUP1Q9Y679 476 aa14.24□□□□□ -0.13
LTBR-207ENST00000539925 ICE1Q9Y2F5 2266 aa14.24□□□□□ -0.13
LTBR-207ENST00000539925 DYSFO75923 2080 aa14.24□□□□□ -0.13
LTBR-207ENST00000539925 KIAA2026Q5HYC2 2103 aa14.24□□□□□ -0.13
LTBR-207ENST00000539925 FAM90A26D6RGX4 464 aa14.23□□□□□ -0.13
LTBR-207ENST00000539925 TMPRSS2O15393 492 aa14.23□□□□□ -0.13
LTBR-207ENST00000539925 CLDN1O95832 211 aa14.23□□□□□ -0.13
LTBR-207ENST00000539925 ZNF16P17020 682 aaPredicted RBP14.23□□□□□ -0.13
LTBR-207ENST00000539925 KIR2DS2P43631 304 aa14.23□□□□□ -0.13
LTBR-207ENST00000539925 LOXL3P58215 753 aa14.23□□□□□ -0.13
LTBR-207ENST00000539925 VAMP2P63027 116 aa14.23□□□□□ -0.13
LTBR-207ENST00000539925 Q3ZCU0 254 aa14.23□□□□□ -0.13
LTBR-207ENST00000539925 PDZD9Q8IXQ8 264 aa14.23□□□□□ -0.13
LTBR-207ENST00000539925 GFOD1Q9NXC2 390 aa14.23□□□□□ -0.13
LTBR-207ENST00000539925 PSG11Q9UQ72 335 aa14.23□□□□□ -0.13
LTBR-207ENST00000539925 MMP24Q9Y5R2 645 aa14.23□□□□□ -0.13
LTBR-207ENST00000539925 SPENQ96T58 3664 aaKnown RBP14.23□□□□□ -0.13
LTBR-207ENST00000539925 CACNA1DQ01668 2161 aa14.23□□□□□ -0.13
LTBR-207ENST00000539925 MSGN1A6NI15 193 aa14.23□□□□□ -0.13
LTBR-207ENST00000539925 NDUFB3O43676 98 aa14.23□□□□□ -0.13
LTBR-207ENST00000539925 PITX3O75364 302 aa14.23□□□□□ -0.13
LTBR-207ENST00000539925 GRNP28799 593 aaKnown RBP14.23□□□□□ -0.13
LTBR-207ENST00000539925 SNTB1Q13884 538 aaKnown RBP14.23□□□□□ -0.13
LTBR-207ENST00000539925 ZNF585BQ52M93 769 aa14.23□□□□□ -0.13
LTBR-207ENST00000539925 FAM216BQ8N7L0 139 aa14.23□□□□□ -0.13
LTBR-207ENST00000539925 NEUROG1Q92886 237 aa14.23□□□□□ -0.13
LTBR-207ENST00000539925 RAB40CQ96S21 281 aa14.23□□□□□ -0.13
LTBR-207ENST00000539925 DCTN5Q9BTE1 182 aa14.23□□□□□ -0.13
LTBR-207ENST00000539925 IDI2-AS1Q9NZ38 188 aa14.23□□□□□ -0.13
LTBR-207ENST00000539925 CACFD1Q9UGQ2 172 aa14.23□□□□□ -0.13
LTBR-207ENST00000539925 RNF150Q9ULK6 438 aa14.23□□□□□ -0.13
LTBR-207ENST00000539925 BORCS7-ASMTA0A0B4J1R7 106 aa14.22□□□□□ -0.13
LTBR-207ENST00000539925 RBFOX2O43251 390 aaKnown RBP eCLIP14.22□□□□□ -0.133e-10■■■■□ 19.3
LTBR-207ENST00000539925 LOXP28300 417 aaPredicted RBP14.22□□□□□ -0.13
LTBR-207ENST00000539925 ARHGDIBP52566 201 aa14.22□□□□□ -0.13
LTBR-207ENST00000539925 MRPS11P82912 194 aaKnown RBP14.22□□□□□ -0.13
LTBR-207ENST00000539925 C17orf58Q2M2W7 97 aa14.22□□□□□ -0.13
LTBR-207ENST00000539925 TCTEX1D2Q8WW35 142 aa14.22□□□□□ -0.13
LTBR-207ENST00000539925 GPR146Q96CH1 333 aa14.22□□□□□ -0.13
LTBR-207ENST00000539925 GPHA2Q96T91 129 aa14.22□□□□□ -0.13
LTBR-207ENST00000539925 CYTL1Q9NRR1 136 aa14.22□□□□□ -0.13
LTBR-207ENST00000539925 SDHAF2Q9NX18 166 aa14.22□□□□□ -0.13
LTBR-207ENST00000539925 RCL1Q9Y2P8 373 aaKnown RBP14.22□□□□□ -0.13
LTBR-207ENST00000539925 ANKHD1Q8IWZ3 2542 aaKnown RBP14.22□□□□□ -0.13
LTBR-207ENST00000539925 CHD8Q9HCK8 2581 aa14.21□□□□□ -0.13
LTBR-207ENST00000539925 TNFRSF13BO14836 293 aaPredicted RBP14.21□□□□□ -0.13
LTBR-207ENST00000539925 SIAH2O43255 324 aa14.21□□□□□ -0.13
LTBR-207ENST00000539925 NDUFB7P17568 137 aa14.21□□□□□ -0.13
LTBR-207ENST00000539925 LPAR6P43657 344 aa14.21□□□□□ -0.13
LTBR-207ENST00000539925 BAXQ07812 192 aa14.21□□□□□ -0.13
LTBR-207ENST00000539925 ZCCHC24Q8N2G6 241 aaKnown RBP14.21□□□□□ -0.13
LTBR-207ENST00000539925 DMBX1Q8NFW5 382 aa14.21□□□□□ -0.13
LTBR-207ENST00000539925 ADTRPQ96IZ2 230 aa14.21□□□□□ -0.13
LTBR-207ENST00000539925 RAB1BQ9H0U4 201 aa14.21□□□□□ -0.13
LTBR-207ENST00000539925 CBLN4Q9NTU7 201 aa14.21□□□□□ -0.13
LTBR-207ENST00000539925 PRELID3BQ9Y3B1 194 aa14.21□□□□□ -0.13
LTBR-207ENST00000539925 DSPP15924 2871 aaKnown RBP14.21□□□□□ -0.13
LTBR-207ENST00000539925 IGHV3-43A0A0B4J1X8 118 aa14.2□□□□□ -0.14
LTBR-207ENST00000539925 ST8SIA5O15466 376 aa14.2□□□□□ -0.14
LTBR-207ENST00000539925 LY86O95711 162 aa14.2□□□□□ -0.14
LTBR-207ENST00000539925 PLAUP00749 431 aa14.2□□□□□ -0.14
LTBR-207ENST00000539925 NMBP08949 121 aa14.2□□□□□ -0.14
LTBR-207ENST00000539925 IGHV3-43DP0DP04 118 aa14.2□□□□□ -0.14
LTBR-207ENST00000539925 RRASP10301 218 aa14.2□□□□□ -0.14
LTBR-207ENST00000539925 TMEM33P57088 247 aa14.2□□□□□ -0.14
LTBR-207ENST00000539925 RPL31P62899 125 aaKnown RBP14.2□□□□□ -0.14
LTBR-207ENST00000539925 SPAG16Q8N0X2 631 aa14.2□□□□□ -0.14
LTBR-207ENST00000539925 FGFRL1Q8N441 504 aa14.2□□□□□ -0.14
LTBR-207ENST00000539925 OR2C3Q8N628 320 aa14.2□□□□□ -0.14
LTBR-207ENST00000539925 ABHD14AQ9BUJ0 271 aa14.2□□□□□ -0.14
LTBR-207ENST00000539925 PFDN2Q9UHV9 154 aa14.2□□□□□ -0.14
LTBR-207ENST00000539925 TOR1AO14656 332 aa14.2□□□□□ -0.14
LTBR-207ENST00000539925 RAB29O14966 203 aa14.2□□□□□ -0.14
LTBR-207ENST00000539925 GPR37O15354 613 aa14.2□□□□□ -0.14
LTBR-207ENST00000539925 MED6O75586 246 aa14.2□□□□□ -0.14
LTBR-207ENST00000539925 IGKV1-39P01597 117 aa14.2□□□□□ -0.14
LTBR-207ENST00000539925 IGKV1D-39P04432 117 aa14.2□□□□□ -0.14
LTBR-207ENST00000539925 SELLP14151 372 aa14.2□□□□□ -0.14
LTBR-207ENST00000539925 TAS2R30P59541 319 aa14.2□□□□□ -0.14
LTBR-207ENST00000539925 RPL23AP62750 156 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms