RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 WDR61Q9GZS3 305 aaKnown RBP6.25□□□□□ -1.41
CPNE4-208ENST00000511604 RNF208Q9H0X6 261 aa6.25□□□□□ -1.41
CPNE4-208ENST00000511604 EDDM13A0A1B0GTR0 161 aa6.25□□□□□ -1.41
CPNE4-208ENST00000511604 A0A1B0GW15 77 aa6.25□□□□□ -1.41
CPNE4-208ENST00000511604 C1QTNF9BB2RNN3 333 aa6.25□□□□□ -1.41
CPNE4-208ENST00000511604 FOXS1O43638 330 aa6.25□□□□□ -1.41
CPNE4-208ENST00000511604 RENP00797 406 aa6.25□□□□□ -1.41
CPNE4-208ENST00000511604 TNFP01375 233 aa6.25□□□□□ -1.41
CPNE4-208ENST00000511604 CA7P43166 264 aa6.25□□□□□ -1.41
CPNE4-208ENST00000511604 NPBWR2P48146 333 aa6.25□□□□□ -1.41
CPNE4-208ENST00000511604 CYB561P49447 251 aa6.25□□□□□ -1.41
CPNE4-208ENST00000511604 RPL24P83731 157 aaKnown RBP6.25□□□□□ -1.41
CPNE4-208ENST00000511604 Q56UQ5 140 aa6.25□□□□□ -1.41
CPNE4-208ENST00000511604 SFTPA1Q8IWL2 248 aa6.25□□□□□ -1.41
CPNE4-208ENST00000511604 FAM19A2Q8N3H0 131 aa6.25□□□□□ -1.41
CPNE4-208ENST00000511604 C1orf147Q96MC9 270 aaPredicted RBP6.25□□□□□ -1.41
CPNE4-208ENST00000511604 GPER1Q99527 375 aa6.25□□□□□ -1.41
CPNE4-208ENST00000511604 ST20Q9HBF5 79 aa6.25□□□□□ -1.41
CPNE4-208ENST00000511604 PSG8Q9UQ74 426 aa6.25□□□□□ -1.41
CPNE4-208ENST00000511604 R4GMQ9 66 aa6.25□□□□□ -1.41
CPNE4-208ENST00000511604 PHF3Q92576 2039 aaKnown RBP6.24□□□□□ -1.41
CPNE4-208ENST00000511604 CCL15-CCL14A0A0B4J2E2 113 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 A0A1W2PR80 420 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 H0Y8G0 127 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 PHF1O43189 567 aaPredicted RBP6.24□□□□□ -1.41
CPNE4-208ENST00000511604 LAMTOR5O43504 91 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 SRSF10O75494 262 aaKnown RBP6.24□□□□□ -1.41
CPNE4-208ENST00000511604 AGFG2O95081 481 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 CTLA4P16410 223 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 GATA3P23771 443 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 SRD5A2P31213 254 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 OR3A4PP47883 348 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 THBS3P49746 956 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 ZNF141Q15928 474 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 CCL15Q16663 113 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 RSPO4Q2I0M5 234 aaPredicted RBP6.24□□□□□ -1.41
CPNE4-208ENST00000511604 PRTGQ2VWP7 1150 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 PHLDA2Q53GA4 152 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 CXorf66Q5JRM2 361 aaPredicted RBP6.24□□□□□ -1.41
CPNE4-208ENST00000511604 ZNF324BQ6AW86 544 aaPredicted RBP6.24□□□□□ -1.41
CPNE4-208ENST00000511604 CHRDL2Q6WN34 429 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 C1QL2Q7Z5L3 287 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 ZNF721Q8TF20 911 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 DPF1Q92782 380 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 AP1S3Q96PC3 154 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 JMJD8Q96S16 334 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 SPATA25Q9BR10 227 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 CFHR5Q9BXR6 569 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 SLC39A9Q9NUM3 307 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 JPT1Q9UK76 154 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 TNFRSF18Q9Y5U5 241 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 ZNF716A6NP11 495 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 SNURFLB1AK76 121 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 F2RL2O00254 374 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 TMPRSS2O15393 492 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 SLC31A1O15431 190 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 SLC16A7O60669 478 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 GPR75O95800 540 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 FTH1P19P0C7X4 201 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 PGCP20142 388 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 NTF3P20783 257 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 IER3P46695 156 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 PPOXP50336 477 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 GPM6AP51674 278 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 ZNF157P51786 506 aaPredicted RBP6.24□□□□□ -1.41
CPNE4-208ENST00000511604 SERF2P84101 59 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 ZNF90Q03938 601 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 MRPL54Q6P161 138 aaKnown RBP6.24□□□□□ -1.41
CPNE4-208ENST00000511604 INO80CQ6PI98 192 aaPredicted RBP6.24□□□□□ -1.41
CPNE4-208ENST00000511604 SLC25A34Q6PIV7 304 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 BRICD5Q6PL45 260 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 OR2K2Q8NGT1 345 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 SCGB1C1Q8TD33 95 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 OVCA2Q8WZ82 227 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 NUS1Q96E22 293 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 NEIL1Q96FI4 390 aaPredicted RBP6.24□□□□□ -1.41
CPNE4-208ENST00000511604 ABHD17AQ96GS6 310 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 ABHD14BQ96IU4 210 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 GPHA2Q96T91 129 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 JKAMPQ9P055 326 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 OR1A2Q9Y585 309 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 HS3ST3A1Q9Y663 406 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 SPACA6W5XKT8 324 aa6.24□□□□□ -1.41
CPNE4-208ENST00000511604 COL6A3P12111 3177 aa6.23□□□□□ -1.41
CPNE4-208ENST00000511604 RTTNQ86VV8 2226 aa6.23□□□□□ -1.41
CPNE4-208ENST00000511604 TRAV9-1A0A075B6T8 112 aa6.23□□□□□ -1.41
CPNE4-208ENST00000511604 IGKV1D-43A0A0B4J1Z2 117 aa6.23□□□□□ -1.41
CPNE4-208ENST00000511604 A0A1W2PRU2 124 aa6.23□□□□□ -1.41
CPNE4-208ENST00000511604 PSMB11A5LHX3 300 aa6.23□□□□□ -1.41
CPNE4-208ENST00000511604 TMEM189A5PLL7 270 aa6.23□□□□□ -1.41
CPNE4-208ENST00000511604 ZNF207O43670 478 aaKnown RBP6.23□□□□□ -1.41
CPNE4-208ENST00000511604 RHBDL1O75783 438 aa6.23□□□□□ -1.41
CPNE4-208ENST00000511604 SRFP11831 508 aa6.23□□□□□ -1.41
CPNE4-208ENST00000511604 HNRNPA2B1P22626 353 aaKnown RBP6.23□□□□□ -1.41
CPNE4-208ENST00000511604 NPPCP23582 126 aa6.23□□□□□ -1.41
CPNE4-208ENST00000511604 NPY1RP25929 384 aa6.23□□□□□ -1.41
CPNE4-208ENST00000511604 PMP22Q01453 160 aa6.23□□□□□ -1.41
CPNE4-208ENST00000511604 MEF2CQ06413 473 aaPredicted RBP6.23□□□□□ -1.41
CPNE4-208ENST00000511604 GABRA6Q16445 453 aa6.23□□□□□ -1.41
CPNE4-208ENST00000511604 PRICKLE4Q2TBC4 344 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms