RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 OR5J2Q8NH18 312 aa1.06□□□□□ -2.24
ECHDC1-213ENST00000474240 OR5AK3PQ8NH89 298 aa1.06□□□□□ -2.24
ECHDC1-213ENST00000474240 RORBQ92753 470 aa1.06□□□□□ -2.24
ECHDC1-213ENST00000474240 FGF13Q92913 245 aa1.06□□□□□ -2.24
ECHDC1-213ENST00000474240 LRRC45Q96CN5 670 aa1.06□□□□□ -2.24
ECHDC1-213ENST00000474240 TRNT1Q96Q11 434 aaKnown RBP1.06□□□□□ -2.24
ECHDC1-213ENST00000474240 TBX5Q99593 518 aa1.06□□□□□ -2.24
ECHDC1-213ENST00000474240 TMEM208Q9BTX3 173 aa1.06□□□□□ -2.24
ECHDC1-213ENST00000474240 SPZ1Q9BXG8 430 aa1.06□□□□□ -2.24
ECHDC1-213ENST00000474240 METTL9Q9H1A3 318 aa1.06□□□□□ -2.24
ECHDC1-213ENST00000474240 ATAD5Q96QE3 1844 aa1.05□□□□□ -2.24
ECHDC1-213ENST00000474240 ADGRB3O60242 1522 aa1.05□□□□□ -2.24
ECHDC1-213ENST00000474240 GOLGA8QA0A0J9YX86 632 aa1.05□□□□□ -2.24
ECHDC1-213ENST00000474240 A0A1B0GX12 115 aa1.05□□□□□ -2.24
ECHDC1-213ENST00000474240 F8W036 122 aa1.05□□□□□ -2.24
ECHDC1-213ENST00000474240 SLC17A3O00476 420 aa1.05□□□□□ -2.24
ECHDC1-213ENST00000474240 GNRH2O43555 120 aa1.05□□□□□ -2.24
ECHDC1-213ENST00000474240 SGCEO43556 437 aa1.05□□□□□ -2.24
ECHDC1-213ENST00000474240 CRYBA1P05813 215 aa1.05□□□□□ -2.24
ECHDC1-213ENST00000474240 LIMS3P0CW19 117 aa1.05□□□□□ -2.24
ECHDC1-213ENST00000474240 LIMS4P0CW20 117 aa1.05□□□□□ -2.24
ECHDC1-213ENST00000474240 NPPCP23582 126 aa1.05□□□□□ -2.24
ECHDC1-213ENST00000474240 OPRM1P35372 400 aa1.05□□□□□ -2.24
ECHDC1-213ENST00000474240 FAM3AP98173 230 aa1.05□□□□□ -2.24
ECHDC1-213ENST00000474240 TBC1D28Q2M2D7 210 aa1.05□□□□□ -2.24
ECHDC1-213ENST00000474240 FAM229BQ4G0N7 80 aa1.05□□□□□ -2.24
ECHDC1-213ENST00000474240 RBM48Q5RL73 367 aaKnown RBP1.05□□□□□ -2.24
ECHDC1-213ENST00000474240 AMTNQ6UX39 209 aa1.05□□□□□ -2.24
ECHDC1-213ENST00000474240 RPS19BP1Q86WX3 136 aaKnown RBP1.05□□□□□ -2.24
ECHDC1-213ENST00000474240 OR8B12Q8NGG6 310 aa1.05□□□□□ -2.24
ECHDC1-213ENST00000474240 OR2D3Q8NGH3 330 aa1.05□□□□□ -2.24
ECHDC1-213ENST00000474240 ANGPTL6Q8NI99 470 aa1.05□□□□□ -2.24
ECHDC1-213ENST00000474240 UPK3BQ9BT76 320 aa1.05□□□□□ -2.24
ECHDC1-213ENST00000474240 C8orf4Q9NR00 106 aa1.05□□□□□ -2.24
ECHDC1-213ENST00000474240 NRBP2Q9NSY0 501 aa1.05□□□□□ -2.24
ECHDC1-213ENST00000474240 MRM2Q9UI43 246 aaKnown RBP1.05□□□□□ -2.24
ECHDC1-213ENST00000474240 CFAP45Q9UL16 551 aa1.05□□□□□ -2.24
ECHDC1-213ENST00000474240 ICE1Q9Y2F5 2266 aa1.05□□□□□ -2.24
ECHDC1-213ENST00000474240 TRAV41A0A0B4J266 112 aa1.04□□□□□ -2.24
ECHDC1-213ENST00000474240 DAPL1A0PJW8 107 aa1.04□□□□□ -2.24
ECHDC1-213ENST00000474240 C11orf86A6NJI1 115 aa1.04□□□□□ -2.24
ECHDC1-213ENST00000474240 J3QLI3 93 aa1.04□□□□□ -2.24
ECHDC1-213ENST00000474240 GSTZ1O43708 216 aaPredicted RBP1.04□□□□□ -2.24
ECHDC1-213ENST00000474240 STX10O60499 249 aa1.04□□□□□ -2.24
ECHDC1-213ENST00000474240 ARL6IP5O75915 188 aa1.04□□□□□ -2.24
ECHDC1-213ENST00000474240 NAPSAO96009 420 aa1.04□□□□□ -2.24
ECHDC1-213ENST00000474240 CDK2P24941 298 aa1.04□□□□□ -2.24
ECHDC1-213ENST00000474240 PEBP1P30086 187 aaKnown RBP1.04□□□□□ -2.24
ECHDC1-213ENST00000474240 CD79BP40259 229 aa1.04□□□□□ -2.24
ECHDC1-213ENST00000474240 DLX6P56179 175 aa1.04□□□□□ -2.24
ECHDC1-213ENST00000474240 DAD1P61803 113 aa1.04□□□□□ -2.24
ECHDC1-213ENST00000474240 HES3Q5TGS1 186 aa1.04□□□□□ -2.24
ECHDC1-213ENST00000474240 LGALS9CQ6DKI2 356 aa1.04□□□□□ -2.24
ECHDC1-213ENST00000474240 Q6ZTI0 123 aa1.04□□□□□ -2.24
ECHDC1-213ENST00000474240 CYGBQ8WWM9 190 aa1.04□□□□□ -2.24
ECHDC1-213ENST00000474240 TLCD1Q96CP7 247 aa1.04□□□□□ -2.24
ECHDC1-213ENST00000474240 TMEM56Q96MV1 263 aa1.04□□□□□ -2.24
ECHDC1-213ENST00000474240 ASCL3Q9NQ33 180 aa1.04□□□□□ -2.24
ECHDC1-213ENST00000474240 AGPAT3Q9NRZ7 376 aa1.04□□□□□ -2.24
ECHDC1-213ENST00000474240 MS4A12Q9NXJ0 267 aa1.04□□□□□ -2.24
ECHDC1-213ENST00000474240 MRPS16Q9Y3D3 137 aaKnown RBP1.04□□□□□ -2.24
ECHDC1-213ENST00000474240 NUP153P49790 1475 aaKnown RBP1.04□□□□□ -2.24
ECHDC1-213ENST00000474240 SORL1Q92673 2214 aa1.04□□□□□ -2.24
ECHDC1-213ENST00000474240 GBF1Q92538 1859 aa1.03□□□□□ -2.24
ECHDC1-213ENST00000474240 A0A0G2JQZ4 141 aa1.03□□□□□ -2.24
ECHDC1-213ENST00000474240 GOLGA8RI6L899 631 aa1.03□□□□□ -2.24
ECHDC1-213ENST00000474240 TXNDC9O14530 226 aa1.03□□□□□ -2.24
ECHDC1-213ENST00000474240 OR13C7P0DN81 318 aa1.03□□□□□ -2.24
ECHDC1-213ENST00000474240 ADORA1P30542 326 aa1.03□□□□□ -2.24
ECHDC1-213ENST00000474240 CA7P43166 264 aa1.03□□□□□ -2.24
ECHDC1-213ENST00000474240 EMP1P54849 157 aa1.03□□□□□ -2.24
ECHDC1-213ENST00000474240 TSPEAR-AS2P59090 65 aa1.03□□□□□ -2.24
ECHDC1-213ENST00000474240 AP1S1P61966 158 aa1.03□□□□□ -2.24
ECHDC1-213ENST00000474240 GLO1Q04760 184 aa1.03□□□□□ -2.24
ECHDC1-213ENST00000474240 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.03□□□□□ -2.24
ECHDC1-213ENST00000474240 AADACL4Q5VUY2 407 aa1.03□□□□□ -2.24
ECHDC1-213ENST00000474240 CRLF3Q8IUI8 442 aa1.03□□□□□ -2.24
ECHDC1-213ENST00000474240 C17orf78Q8N4C9 275 aa1.03□□□□□ -2.24
ECHDC1-213ENST00000474240 DYNC2LI1Q8TCX1 351 aa1.03□□□□□ -2.24
ECHDC1-213ENST00000474240 TNFAIP8L1Q8WVP5 186 aa1.03□□□□□ -2.24
ECHDC1-213ENST00000474240 C19orf60Q96EN9 201 aa1.03□□□□□ -2.24
ECHDC1-213ENST00000474240 ZNF625Q96I27 306 aaPredicted RBP1.03□□□□□ -2.24
ECHDC1-213ENST00000474240 OR7D2Q96RA2 312 aa1.03□□□□□ -2.24
ECHDC1-213ENST00000474240 TIMM21Q9BVV7 248 aa1.03□□□□□ -2.24
ECHDC1-213ENST00000474240 ZNF471Q9BX82 626 aaPredicted RBP1.03□□□□□ -2.24
ECHDC1-213ENST00000474240 MRPL32Q9BYC8 188 aaKnown RBP1.03□□□□□ -2.24
ECHDC1-213ENST00000474240 NKX6-2Q9C056 277 aaPredicted RBP1.03□□□□□ -2.24
ECHDC1-213ENST00000474240 ENPP5Q9UJA9 477 aa1.03□□□□□ -2.24
ECHDC1-213ENST00000474240 CLUHO75153 1309 aa1.03□□□□□ -2.24
ECHDC1-213ENST00000474240 GRIN2BQ13224 1484 aa1.03□□□□□ -2.24
ECHDC1-213ENST00000474240 COL4A1P02462 1669 aa1.03□□□□□ -2.24
ECHDC1-213ENST00000474240 IGKV2-40A0A087WW87 121 aaPredicted RBP1.02□□□□□ -2.25
ECHDC1-213ENST00000474240 TRAV8-1A0A0A6YYK1 113 aa1.02□□□□□ -2.25
ECHDC1-213ENST00000474240 IGKV1D-43A0A0B4J1Z2 117 aa1.02□□□□□ -2.25
ECHDC1-213ENST00000474240 ERICH2A1L162 156 aa1.02□□□□□ -2.25
ECHDC1-213ENST00000474240 OR11H12B2RN74 326 aa1.02□□□□□ -2.25
ECHDC1-213ENST00000474240 YKT6O15498 198 aa1.02□□□□□ -2.25
ECHDC1-213ENST00000474240 IGKV2D-40P01614 121 aaPredicted RBP1.02□□□□□ -2.25
ECHDC1-213ENST00000474240 IGHV1-69P01742 117 aa1.02□□□□□ -2.25
ECHDC1-213ENST00000474240 ETV1P50549 477 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms