RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 TSSC4Q9Y5U2 329 aaPredicted RBP11.09□□□□□ -0.63
RTFDC1-204ENST00000449062 TCRBV4S1A1TA0A5B7 111 aa11.08□□□□□ -0.64
RTFDC1-204ENST00000449062 SMIM30A4D0T7 59 aa11.08□□□□□ -0.64
RTFDC1-204ENST00000449062 HIST1H1DP16402 221 aaKnown RBP11.08□□□□□ -0.64
RTFDC1-204ENST00000449062 SAMD5Q5TGI4 173 aa11.08□□□□□ -0.64
RTFDC1-204ENST00000449062 SLC35E3Q7Z769 313 aa11.08□□□□□ -0.64
RTFDC1-204ENST00000449062 OR4F17Q8NGA8 305 aa11.08□□□□□ -0.64
RTFDC1-204ENST00000449062 SETD6Q8TBK2 473 aa11.08□□□□□ -0.64
RTFDC1-204ENST00000449062 CHPT1Q8WUD6 406 aa11.08□□□□□ -0.64
RTFDC1-204ENST00000449062 OR4F4Q96R69 305 aa11.08□□□□□ -0.64
RTFDC1-204ENST00000449062 GHITMQ9H3K2 345 aa11.08□□□□□ -0.64
RTFDC1-204ENST00000449062 RNF167Q9H6Y7 350 aa11.08□□□□□ -0.64
RTFDC1-204ENST00000449062 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.08□□□□□ -0.64
RTFDC1-204ENST00000449062 LINC00527Q9UJ94 153 aa11.08□□□□□ -0.64
RTFDC1-204ENST00000449062 SSR3Q9UNL2 185 aa11.08□□□□□ -0.64
RTFDC1-204ENST00000449062 PSMB11A5LHX3 300 aa11.07□□□□□ -0.64
RTFDC1-204ENST00000449062 SERPINE3A8MV23 424 aa11.07□□□□□ -0.64
RTFDC1-204ENST00000449062 G3V4G9 280 aa11.07□□□□□ -0.64
RTFDC1-204ENST00000449062 RAB29O14966 203 aa11.07□□□□□ -0.64
RTFDC1-204ENST00000449062 CLEC2LP0C7M8 214 aa11.07□□□□□ -0.64
RTFDC1-204ENST00000449062 GNB3P16520 340 aa11.07□□□□□ -0.64
RTFDC1-204ENST00000449062 ZBTB25P24278 435 aa11.07□□□□□ -0.64
RTFDC1-204ENST00000449062 GADD45AP24522 165 aa11.07□□□□□ -0.64
RTFDC1-204ENST00000449062 SDC2P34741 201 aa11.07□□□□□ -0.64
RTFDC1-204ENST00000449062 SRSF7Q16629 238 aaKnown RBP eCLIP11.07□□□□□ -0.64
RTFDC1-204ENST00000449062 BEAN1Q3B7T3 259 aa11.07□□□□□ -0.64
RTFDC1-204ENST00000449062 RPL39P5Q59GN2 51 aa11.07□□□□□ -0.64
RTFDC1-204ENST00000449062 FAM71F2Q6NXP2 309 aa11.07□□□□□ -0.64
RTFDC1-204ENST00000449062 Q6ZS49 121 aa11.07□□□□□ -0.64
RTFDC1-204ENST00000449062 STPG2Q8N412 459 aa11.07□□□□□ -0.64
RTFDC1-204ENST00000449062 NPBQ8NG41 125 aa11.07□□□□□ -0.64
RTFDC1-204ENST00000449062 OR5AN1Q8NGI8 311 aa11.07□□□□□ -0.64
RTFDC1-204ENST00000449062 ABHD14BQ96IU4 210 aa11.07□□□□□ -0.64
RTFDC1-204ENST00000449062 HSPB9Q9BQS6 159 aa11.07□□□□□ -0.64
RTFDC1-204ENST00000449062 PIPOXQ9P0Z9 390 aa11.07□□□□□ -0.64
RTFDC1-204ENST00000449062 ZNF580Q9UK33 172 aa11.07□□□□□ -0.64
RTFDC1-204ENST00000449062 ELF5Q9UKW6 265 aaPredicted RBP11.07□□□□□ -0.64
RTFDC1-204ENST00000449062 TRBV6-7A0A0A0MS04 114 aa11.06□□□□□ -0.64
RTFDC1-204ENST00000449062 A0A1W2PRX2 142 aa11.06□□□□□ -0.64
RTFDC1-204ENST00000449062 METTL21EPA6NDL7 271 aa11.06□□□□□ -0.64
RTFDC1-204ENST00000449062 DIRAS3O95661 229 aa11.06□□□□□ -0.64
RTFDC1-204ENST00000449062 IGF1P05019 195 aa11.06□□□□□ -0.64
RTFDC1-204ENST00000449062 FCGR3AP08637 254 aa11.06□□□□□ -0.64
RTFDC1-204ENST00000449062 GSTT2P0CG29 244 aa11.06□□□□□ -0.64
RTFDC1-204ENST00000449062 GSTT2BP0CG30 244 aa11.06□□□□□ -0.64
RTFDC1-204ENST00000449062 CD36P16671 472 aa11.06□□□□□ -0.64
RTFDC1-204ENST00000449062 CNTFRP26992 372 aa11.06□□□□□ -0.64
RTFDC1-204ENST00000449062 ACTBP60709 375 aa11.06□□□□□ -0.64
RTFDC1-204ENST00000449062 CFHR3Q02985 330 aa11.06□□□□□ -0.64
RTFDC1-204ENST00000449062 CDNFQ49AH0 187 aa11.06□□□□□ -0.64
RTFDC1-204ENST00000449062 PDLIM3Q53GG5 364 aaPredicted RBP11.06□□□□□ -0.64
RTFDC1-204ENST00000449062 IGSF11Q5DX21 431 aa11.06□□□□□ -0.64
RTFDC1-204ENST00000449062 C1QL4Q86Z23 238 aa11.06□□□□□ -0.64
RTFDC1-204ENST00000449062 RNF152Q8N8N0 203 aa11.06□□□□□ -0.64
RTFDC1-204ENST00000449062 OR4X2Q8NGF9 303 aa11.06□□□□□ -0.64
RTFDC1-204ENST00000449062 OR4A4PQ8NGN8 299 aa11.06□□□□□ -0.64
RTFDC1-204ENST00000449062 KCTD7Q96MP8 289 aa11.06□□□□□ -0.64
RTFDC1-204ENST00000449062 RASL11BQ9BPW5 248 aa11.06□□□□□ -0.64
RTFDC1-204ENST00000449062 CHCHD6Q9BRQ6 235 aa11.06□□□□□ -0.64
RTFDC1-204ENST00000449062 CABLES2Q9BTV7 478 aa11.06□□□□□ -0.64
RTFDC1-204ENST00000449062 CENPOQ9BU64 300 aa11.06□□□□□ -0.64
RTFDC1-204ENST00000449062 ZNF230Q9UIE0 474 aaPredicted RBP11.06□□□□□ -0.64
RTFDC1-204ENST00000449062 RNF150Q9ULK6 438 aa11.06□□□□□ -0.64
RTFDC1-204ENST00000449062 IGKV1D-8A0A087WSZ0 117 aa11.05□□□□□ -0.64
RTFDC1-204ENST00000449062 TRIM64CA6NLI5 447 aa11.05□□□□□ -0.64
RTFDC1-204ENST00000449062 H0YJW9 148 aa11.05□□□□□ -0.64
RTFDC1-204ENST00000449062 AP4M1O00189 453 aa11.05□□□□□ -0.64
RTFDC1-204ENST00000449062 FABP7O15540 132 aa11.05□□□□□ -0.64
RTFDC1-204ENST00000449062 NDUFA3O95167 84 aa11.05□□□□□ -0.64
RTFDC1-204ENST00000449062 CD3GP09693 182 aa11.05□□□□□ -0.64
RTFDC1-204ENST00000449062 SNRPBP14678 240 aaKnown RBP11.05□□□□□ -0.64
RTFDC1-204ENST00000449062 SOX6P35712 828 aa11.05□□□□□ -0.64
RTFDC1-204ENST00000449062 LINC00205P59089 165 aa11.05□□□□□ -0.64
RTFDC1-204ENST00000449062 NEDD8Q15843 81 aa11.05□□□□□ -0.64
RTFDC1-204ENST00000449062 PNLIPRP3Q17RR3 467 aa11.05□□□□□ -0.64
RTFDC1-204ENST00000449062 SFXN4Q6P4A7 337 aa11.05□□□□□ -0.64
RTFDC1-204ENST00000449062 EDARADDQ8WWZ3 215 aa11.05□□□□□ -0.64
RTFDC1-204ENST00000449062 ATG5Q9H1Y0 275 aa11.05□□□□□ -0.64
RTFDC1-204ENST00000449062 RDH8Q9NYR8 311 aa11.05□□□□□ -0.64
RTFDC1-204ENST00000449062 ZNF107Q9UII5 783 aaPredicted RBP11.05□□□□□ -0.64
RTFDC1-204ENST00000449062 DAPK2Q9UIK4 370 aa11.05□□□□□ -0.64
RTFDC1-204ENST00000449062 GAB2Q9UQC2 676 aa11.05□□□□□ -0.64
RTFDC1-204ENST00000449062 HSPA12AO43301 675 aa11.04□□□□□ -0.64
RTFDC1-204ENST00000449062 RPL23AP62750 156 aaKnown RBP11.04□□□□□ -0.64
RTFDC1-204ENST00000449062 C5orf64Q2M2E5 130 aa11.04□□□□□ -0.64
RTFDC1-204ENST00000449062 OXLD1Q5BKU9 147 aa11.04□□□□□ -0.64
RTFDC1-204ENST00000449062 GLDNQ6ZMI3 551 aaPredicted RBP11.04□□□□□ -0.64
RTFDC1-204ENST00000449062 ETV3LQ6ZN32 361 aa11.04□□□□□ -0.64
RTFDC1-204ENST00000449062 C18orf65Q6ZTR6 163 aa11.04□□□□□ -0.64
RTFDC1-204ENST00000449062 FOXRED2Q8IWF2 684 aa11.04□□□□□ -0.64
RTFDC1-204ENST00000449062 COMMD1Q8N668 190 aa11.04□□□□□ -0.64
RTFDC1-204ENST00000449062 ZNF383Q8NA42 475 aa11.04□□□□□ -0.64
RTFDC1-204ENST00000449062 PHF21AQ96BD5 680 aa11.04□□□□□ -0.64
RTFDC1-204ENST00000449062 YIPF6Q96EC8 236 aa11.04□□□□□ -0.64
RTFDC1-204ENST00000449062 ZFP57Q9NU63 452 aa11.04□□□□□ -0.64
RTFDC1-204ENST00000449062 A0A075B6Q4 140 aa11.03□□□□□ -0.64
RTFDC1-204ENST00000449062 IGHV7-81A0A0B4J1V7 117 aa11.03□□□□□ -0.64
RTFDC1-204ENST00000449062 NBR2O15453 112 aa11.03□□□□□ -0.64
RTFDC1-204ENST00000449062 IGHG4P01861 327 aa11.03□□□□□ -0.64
RTFDC1-204ENST00000449062 HLA-DRB1P01911 266 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms