RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 WIPF1O43516 503 aa10.34□□□□□ -0.75
USE1-207ENST00000596136 MOSP00540 346 aa10.34□□□□□ -0.75
USE1-207ENST00000596136 IGHG2P01859 326 aa10.34□□□□□ -0.75
USE1-207ENST00000596136 VEGFCP49767 419 aa10.34□□□□□ -0.75
USE1-207ENST00000596136 HNF4GQ14541 408 aa10.34□□□□□ -0.75
USE1-207ENST00000596136 ZNF773Q6PK81 442 aa10.34□□□□□ -0.75
USE1-207ENST00000596136 CENPVQ7Z7K6 275 aaPredicted RBP10.34□□□□□ -0.75
USE1-207ENST00000596136 OR8H1Q8NGG4 311 aa10.34□□□□□ -0.75
USE1-207ENST00000596136 OR56B1Q8NGI3 324 aa10.34□□□□□ -0.75
USE1-207ENST00000596136 ARHGAP5-AS1Q96IT6 56 aa10.34□□□□□ -0.75
USE1-207ENST00000596136 ABHD14AQ9BUJ0 271 aa10.34□□□□□ -0.75
USE1-207ENST00000596136 PECRQ9BY49 303 aa10.34□□□□□ -0.75
USE1-207ENST00000596136 ABRACLQ9P1F3 81 aa10.34□□□□□ -0.75
USE1-207ENST00000596136 MGAT4AQ9UM21 535 aa10.34□□□□□ -0.75
USE1-207ENST00000596136 IGHV3-72A0A0B4J1Y9 119 aa10.33□□□□□ -0.76
USE1-207ENST00000596136 ZNF736B4DX44 427 aaPredicted RBP10.33□□□□□ -0.76
USE1-207ENST00000596136 RAB3BP20337 219 aa10.33□□□□□ -0.76
USE1-207ENST00000596136 OR10A3P58181 314 aa10.33□□□□□ -0.76
USE1-207ENST00000596136 PLA2G7Q13093 441 aa10.33□□□□□ -0.76
USE1-207ENST00000596136 NSUN5P1Q3KNT7 163 aa10.33□□□□□ -0.76
USE1-207ENST00000596136 PLAC9Q5JTB6 97 aa10.33□□□□□ -0.76
USE1-207ENST00000596136 HES5Q5TA89 166 aa10.33□□□□□ -0.76
USE1-207ENST00000596136 C22orf42Q6IC83 251 aa10.33□□□□□ -0.76
USE1-207ENST00000596136 ZNF833PQ6ZTB9 187 aa10.33□□□□□ -0.76
USE1-207ENST00000596136 NR2C2APQ86WQ0 139 aa10.33□□□□□ -0.76
USE1-207ENST00000596136 LYG1Q8N1E2 194 aa10.33□□□□□ -0.76
USE1-207ENST00000596136 Q8N9W7 124 aa10.33□□□□□ -0.76
USE1-207ENST00000596136 PTX4Q96A99 478 aa10.33□□□□□ -0.76
USE1-207ENST00000596136 ABCG5Q9H222 651 aa10.33□□□□□ -0.76
USE1-207ENST00000596136 Q9N2K0 584 aa10.33□□□□□ -0.76
USE1-207ENST00000596136 LIN7CQ9NUP9 197 aaKnown RBP10.33□□□□□ -0.76
USE1-207ENST00000596136 RRP15Q9Y3B9 282 aaKnown RBP10.33□□□□□ -0.76
USE1-207ENST00000596136 KCNAB3O43448 404 aa10.32□□□□□ -0.76
USE1-207ENST00000596136 RAB6AP20340 208 aa10.32□□□□□ -0.76
USE1-207ENST00000596136 MYL9P24844 172 aa10.32□□□□□ -0.76
USE1-207ENST00000596136 PSMB9P28065 219 aa10.32□□□□□ -0.76
USE1-207ENST00000596136 DEFA6Q01524 100 aa10.32□□□□□ -0.76
USE1-207ENST00000596136 LSAMPQ13449 338 aa10.32□□□□□ -0.76
USE1-207ENST00000596136 C9orf152Q5JTZ5 239 aa10.32□□□□□ -0.76
USE1-207ENST00000596136 FAM71F2Q6NXP2 309 aa10.32□□□□□ -0.76
USE1-207ENST00000596136 C10orf99Q6UWK7 81 aa10.32□□□□□ -0.76
USE1-207ENST00000596136 FAM71E2Q8N5Q1 922 aa10.32□□□□□ -0.76
USE1-207ENST00000596136 OR2AK2Q8NG84 335 aa10.32□□□□□ -0.76
USE1-207ENST00000596136 OR4F17Q8NGA8 305 aa10.32□□□□□ -0.76
USE1-207ENST00000596136 CHPT1Q8WUD6 406 aa10.32□□□□□ -0.76
USE1-207ENST00000596136 OR4F4Q96R69 305 aa10.32□□□□□ -0.76
USE1-207ENST00000596136 AGMATQ9BSE5 352 aa10.32□□□□□ -0.76
USE1-207ENST00000596136 HDHD3Q9BSH5 251 aaPredicted RBP10.32□□□□□ -0.76
USE1-207ENST00000596136 IFI27L2Q9H2X8 130 aa10.32□□□□□ -0.76
USE1-207ENST00000596136 GHITMQ9H3K2 345 aa10.32□□□□□ -0.76
USE1-207ENST00000596136 CHMP1AQ9HD42 196 aaPredicted RBP10.32□□□□□ -0.76
USE1-207ENST00000596136 C12orf4Q9NQ89 552 aa10.32□□□□□ -0.76
USE1-207ENST00000596136 TXNL4BQ9NX01 149 aaKnown RBP10.32□□□□□ -0.76
USE1-207ENST00000596136 STUB1Q9UNE7 303 aa10.32□□□□□ -0.76
USE1-207ENST00000596136 KCNK7Q9Y2U2 307 aa10.32□□□□□ -0.76
USE1-207ENST00000596136 TSSC4Q9Y5U2 329 aaPredicted RBP10.32□□□□□ -0.76
USE1-207ENST00000596136 PRKDCP78527 4128 aaKnown RBP10.31□□□□□ -0.76
USE1-207ENST00000596136 DNAH3Q8TD57 4116 aa10.31□□□□□ -0.76
USE1-207ENST00000596136 RAB27BO00194 218 aa10.31□□□□□ -0.76
USE1-207ENST00000596136 HLA-DRB3P79483 266 aa10.31□□□□□ -0.76
USE1-207ENST00000596136 KCTD21Q4G0X4 260 aa10.31□□□□□ -0.76
USE1-207ENST00000596136 TPRA1Q86W33 373 aa10.31□□□□□ -0.76
USE1-207ENST00000596136 WFDC9Q8NEX5 89 aa10.31□□□□□ -0.76
USE1-207ENST00000596136 OR4X2Q8NGF9 303 aa10.31□□□□□ -0.76
USE1-207ENST00000596136 IL1F10Q8WWZ1 152 aa10.31□□□□□ -0.76
USE1-207ENST00000596136 S1PR3Q99500 378 aa10.31□□□□□ -0.76
USE1-207ENST00000596136 NABP2Q9BQ15 211 aa10.31□□□□□ -0.76
USE1-207ENST00000596136 CMSS1Q9BQ75 279 aaKnown RBP10.31□□□□□ -0.76
USE1-207ENST00000596136 ZNF251Q9BRH9 671 aa10.31□□□□□ -0.76
USE1-207ENST00000596136 TOLLIPQ9H0E2 274 aa10.31□□□□□ -0.76
USE1-207ENST00000596136 SLC23A1Q9UHI7 598 aa10.31□□□□□ -0.76
USE1-207ENST00000596136 SAA2-SAA4A0A096LPE2 208 aa10.3□□□□□ -0.76
USE1-207ENST00000596136 TCRBV4S1A1TA0A5B7 111 aa10.3□□□□□ -0.76
USE1-207ENST00000596136 PSMB11A5LHX3 300 aa10.3□□□□□ -0.76
USE1-207ENST00000596136 LINC01548A6NM66 108 aa10.3□□□□□ -0.76
USE1-207ENST00000596136 NCBP2LA6PVI3 153 aaKnown RBP10.3□□□□□ -0.76
USE1-207ENST00000596136 NOTOA8MTQ0 251 aa10.3□□□□□ -0.76
USE1-207ENST00000596136 RAB29O14966 203 aa10.3□□□□□ -0.76
USE1-207ENST00000596136 SCTP09683 121 aa10.3□□□□□ -0.76
USE1-207ENST00000596136 SAA2P0DJI9 122 aaPredicted RBP10.3□□□□□ -0.76
USE1-207ENST00000596136 GPR12P47775 334 aa10.3□□□□□ -0.76
USE1-207ENST00000596136 OR3A3P47888 321 aa10.3□□□□□ -0.76
USE1-207ENST00000596136 F2RL1P55085 397 aa10.3□□□□□ -0.76
USE1-207ENST00000596136 MOGAT2Q3SYC2 334 aa10.3□□□□□ -0.76
USE1-207ENST00000596136 KPRPQ5T749 579 aaPredicted RBP10.3□□□□□ -0.76
USE1-207ENST00000596136 SAMD5Q5TGI4 173 aa10.3□□□□□ -0.76
USE1-207ENST00000596136 SLC35E3Q7Z769 313 aa10.3□□□□□ -0.76
USE1-207ENST00000596136 OR10R2Q8NGX6 335 aa10.3□□□□□ -0.76
USE1-207ENST00000596136 R3HDM4Q96D70 268 aa10.3□□□□□ -0.76
USE1-207ENST00000596136 RAB3CQ96E17 227 aa10.3□□□□□ -0.76
USE1-207ENST00000596136 NOL4LQ96MY1 436 aaPredicted RBP10.3□□□□□ -0.76
USE1-207ENST00000596136 MRPL20Q9BYC9 149 aaKnown RBP10.3□□□□□ -0.76
USE1-207ENST00000596136 PIPOXQ9P0Z9 390 aa10.3□□□□□ -0.76
USE1-207ENST00000596136 ZNF580Q9UK33 172 aa10.3□□□□□ -0.76
USE1-207ENST00000596136 IGKV1-6A0A0C4DH72 117 aa10.29□□□□□ -0.76
USE1-207ENST00000596136 SERPINE3A8MV23 424 aa10.29□□□□□ -0.76
USE1-207ENST00000596136 TRDCB7Z8K6 153 aa10.29□□□□□ -0.76
USE1-207ENST00000596136 AP4M1O00189 453 aa10.29□□□□□ -0.76
USE1-207ENST00000596136 MFNGO00587 321 aa10.29□□□□□ -0.76
USE1-207ENST00000596136 DIRAS3O95661 229 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms