RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 RAB22AQ9UL26 194 aa7.85□□□□□ -1.15
SKA2-208ENST00000583927 IFITM5A6NNB3 132 aa7.84□□□□□ -1.15
SKA2-208ENST00000583927 SOCS1O15524 211 aa7.84□□□□□ -1.15
SKA2-208ENST00000583927 DIRAS3O95661 229 aa7.84□□□□□ -1.15
SKA2-208ENST00000583927 RAB6AP20340 208 aa7.84□□□□□ -1.15
SKA2-208ENST00000583927 SLC6A1P30531 599 aa7.84□□□□□ -1.15
SKA2-208ENST00000583927 P2RY14Q15391 338 aa7.84□□□□□ -1.15
SKA2-208ENST00000583927 FAM53AQ6NSI3 398 aaPredicted RBP7.84□□□□□ -1.15
SKA2-208ENST00000583927 Q6ZPA2 131 aa7.84□□□□□ -1.15
SKA2-208ENST00000583927 ZNF833PQ6ZTB9 187 aa7.84□□□□□ -1.15
SKA2-208ENST00000583927 MOB3BQ86TA1 216 aa7.84□□□□□ -1.15
SKA2-208ENST00000583927 PRR18Q8N4B5 295 aa7.84□□□□□ -1.15
SKA2-208ENST00000583927 FAM71E2Q8N5Q1 922 aa7.84□□□□□ -1.15
SKA2-208ENST00000583927 C11orf44Q8N8P7 122 aa7.84□□□□□ -1.15
SKA2-208ENST00000583927 OR4X2Q8NGF9 303 aa7.84□□□□□ -1.15
SKA2-208ENST00000583927 CHPT1Q8WUD6 406 aa7.84□□□□□ -1.15
SKA2-208ENST00000583927 ABCG5Q9H222 651 aa7.84□□□□□ -1.15
SKA2-208ENST00000583927 KCNK15Q9H427 330 aa7.84□□□□□ -1.15
SKA2-208ENST00000583927 LIN7CQ9NUP9 197 aaKnown RBP7.84□□□□□ -1.15
SKA2-208ENST00000583927 TSSC4Q9Y5U2 329 aaPredicted RBP7.84□□□□□ -1.15
SKA2-208ENST00000583927 TMEM272A0A1B0GTI8 110 aa7.83□□□□□ -1.16
SKA2-208ENST00000583927 SHISA3A0PJX4 238 aa7.83□□□□□ -1.16
SKA2-208ENST00000583927 KCNAB3O43448 404 aa7.83□□□□□ -1.16
SKA2-208ENST00000583927 WIPF1O43516 503 aa7.83□□□□□ -1.16
SKA2-208ENST00000583927 RAB3BP20337 219 aa7.83□□□□□ -1.16
SKA2-208ENST00000583927 MYL9P24844 172 aa7.83□□□□□ -1.16
SKA2-208ENST00000583927 PPP1CCP36873 323 aaKnown RBP7.83□□□□□ -1.16
SKA2-208ENST00000583927 REG1BP48304 166 aa7.83□□□□□ -1.16
SKA2-208ENST00000583927 VEGFCP49767 419 aa7.83□□□□□ -1.16
SKA2-208ENST00000583927 DEFA6Q01524 100 aa7.83□□□□□ -1.16
SKA2-208ENST00000583927 LSAMPQ13449 338 aa7.83□□□□□ -1.16
SKA2-208ENST00000583927 GNMTQ14749 295 aa7.83□□□□□ -1.16
SKA2-208ENST00000583927 SRSF7Q16629 238 aaKnown RBP eCLIP7.83□□□□□ -1.16
SKA2-208ENST00000583927 TCTEX1D4Q5JR98 221 aa7.83□□□□□ -1.16
SKA2-208ENST00000583927 KPRPQ5T749 579 aaPredicted RBP7.83□□□□□ -1.16
SKA2-208ENST00000583927 ZNF773Q6PK81 442 aa7.83□□□□□ -1.16
SKA2-208ENST00000583927 TPRA1Q86W33 373 aa7.83□□□□□ -1.16
SKA2-208ENST00000583927 LYG1Q8N1E2 194 aa7.83□□□□□ -1.16
SKA2-208ENST00000583927 COMMD1Q8N668 190 aa7.83□□□□□ -1.16
SKA2-208ENST00000583927 Q8N9W7 124 aa7.83□□□□□ -1.16
SKA2-208ENST00000583927 WFDC9Q8NEX5 89 aa7.83□□□□□ -1.16
SKA2-208ENST00000583927 OR2AK2Q8NG84 335 aa7.83□□□□□ -1.16
SKA2-208ENST00000583927 OR52L2PQ8NGH6 319 aa7.83□□□□□ -1.16
SKA2-208ENST00000583927 OR10V1Q8NGI7 309 aa7.83□□□□□ -1.16
SKA2-208ENST00000583927 ARHGAP5-AS1Q96IT6 56 aa7.83□□□□□ -1.16
SKA2-208ENST00000583927 CYYR1Q96J86 154 aa7.83□□□□□ -1.16
SKA2-208ENST00000583927 CHCHD6Q9BRQ6 235 aa7.83□□□□□ -1.16
SKA2-208ENST00000583927 AGMATQ9BSE5 352 aa7.83□□□□□ -1.16
SKA2-208ENST00000583927 CENPOQ9BU64 300 aa7.83□□□□□ -1.16
SKA2-208ENST00000583927 PECRQ9BY49 303 aa7.83□□□□□ -1.16
SKA2-208ENST00000583927 TOLLIPQ9H0E2 274 aa7.83□□□□□ -1.16
SKA2-208ENST00000583927 Q9N2K0 584 aa7.83□□□□□ -1.16
SKA2-208ENST00000583927 C12orf4Q9NQ89 552 aa7.83□□□□□ -1.16
SKA2-208ENST00000583927 PIPOXQ9P0Z9 390 aa7.83□□□□□ -1.16
SKA2-208ENST00000583927 AK3Q9UIJ7 227 aa7.83□□□□□ -1.16
SKA2-208ENST00000583927 TNCP24821 2201 aa7.82□□□□□ -1.16
SKA2-208ENST00000583927 PSMB11A5LHX3 300 aa7.82□□□□□ -1.16
SKA2-208ENST00000583927 AP4M1O00189 453 aa7.82□□□□□ -1.16
SKA2-208ENST00000583927 RAB29O14966 203 aa7.82□□□□□ -1.16
SKA2-208ENST00000583927 CLDN12P56749 244 aa7.82□□□□□ -1.16
SKA2-208ENST00000583927 HLA-DRB3P79483 266 aa7.82□□□□□ -1.16
SKA2-208ENST00000583927 HNF4GQ14541 408 aa7.82□□□□□ -1.16
SKA2-208ENST00000583927 ARL6IP1Q15041 203 aa7.82□□□□□ -1.16
SKA2-208ENST00000583927 NSUN5P1Q3KNT7 163 aa7.82□□□□□ -1.16
SKA2-208ENST00000583927 KCTD21Q4G0X4 260 aa7.82□□□□□ -1.16
SKA2-208ENST00000583927 PDLIM3Q53GG5 364 aaPredicted RBP7.82□□□□□ -1.16
SKA2-208ENST00000583927 PLAC9Q5JTB6 97 aa7.82□□□□□ -1.16
SKA2-208ENST00000583927 SAMD5Q5TGI4 173 aa7.82□□□□□ -1.16
SKA2-208ENST00000583927 SLC35E3Q7Z769 313 aa7.82□□□□□ -1.16
SKA2-208ENST00000583927 FOXRED2Q8IWF2 684 aa7.82□□□□□ -1.16
SKA2-208ENST00000583927 EDARADDQ8WWZ3 215 aa7.82□□□□□ -1.16
SKA2-208ENST00000583927 R3HDM4Q96D70 268 aa7.82□□□□□ -1.16
SKA2-208ENST00000583927 S1PR3Q99500 378 aa7.82□□□□□ -1.16
SKA2-208ENST00000583927 NABP2Q9BQ15 211 aa7.82□□□□□ -1.16
SKA2-208ENST00000583927 ZNF251Q9BRH9 671 aa7.82□□□□□ -1.16
SKA2-208ENST00000583927 GON7Q9BXV9 100 aa7.82□□□□□ -1.16
SKA2-208ENST00000583927 IFI27L2Q9H2X8 130 aa7.82□□□□□ -1.16
SKA2-208ENST00000583927 CHMP1AQ9HD42 196 aaPredicted RBP7.82□□□□□ -1.16
SKA2-208ENST00000583927 ZFP57Q9NU63 452 aa7.82□□□□□ -1.16
SKA2-208ENST00000583927 TXNL4BQ9NX01 149 aaKnown RBP7.82□□□□□ -1.16
SKA2-208ENST00000583927 SLC23A1Q9UHI7 598 aa7.82□□□□□ -1.16
SKA2-208ENST00000583927 STUB1Q9UNE7 303 aa7.82□□□□□ -1.16
SKA2-208ENST00000583927 SAA2-SAA4A0A096LPE2 208 aa7.81□□□□□ -1.16
SKA2-208ENST00000583927 IGHV3-72A0A0B4J1Y9 119 aa7.81□□□□□ -1.16
SKA2-208ENST00000583927 TCRBV4S1A1TA0A5B7 111 aa7.81□□□□□ -1.16
SKA2-208ENST00000583927 METTL21EPA6NDL7 271 aa7.81□□□□□ -1.16
SKA2-208ENST00000583927 NCBP2LA6PVI3 153 aaKnown RBP7.81□□□□□ -1.16
SKA2-208ENST00000583927 NOTOA8MTQ0 251 aa7.81□□□□□ -1.16
SKA2-208ENST00000583927 SERPINE3A8MV23 424 aa7.81□□□□□ -1.16
SKA2-208ENST00000583927 ZNF736B4DX44 427 aaPredicted RBP7.81□□□□□ -1.16
SKA2-208ENST00000583927 RAB27BO00194 218 aa7.81□□□□□ -1.16
SKA2-208ENST00000583927 IGF1P05019 195 aa7.81□□□□□ -1.16
SKA2-208ENST00000583927 SAA2P0DJI9 122 aaPredicted RBP7.81□□□□□ -1.16
SKA2-208ENST00000583927 ZBTB25P24278 435 aa7.81□□□□□ -1.16
SKA2-208ENST00000583927 GADD45AP24522 165 aa7.81□□□□□ -1.16
SKA2-208ENST00000583927 PSMB9P28065 219 aa7.81□□□□□ -1.16
SKA2-208ENST00000583927 GPR12P47775 334 aa7.81□□□□□ -1.16
SKA2-208ENST00000583927 SERPINB10P48595 397 aa7.81□□□□□ -1.16
SKA2-208ENST00000583927 SCAND1P57086 179 aa7.81□□□□□ -1.16
SKA2-208ENST00000583927 OR10A3P58181 314 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms