RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 OR4M1Q8NGD0 313 aa7.57□□□□□ -1.2
CAPN3-216ENST00000567071 OR51T1Q8NGJ9 327 aa7.57□□□□□ -1.2
CAPN3-216ENST00000567071 SEH1LQ96EE3 360 aa7.57□□□□□ -1.2
CAPN3-216ENST00000567071 DIRAS2Q96HU8 199 aa7.57□□□□□ -1.2
CAPN3-216ENST00000567071 CYYR1Q96J86 154 aa7.57□□□□□ -1.2
CAPN3-216ENST00000567071 NRIP2Q9BQI9 281 aa7.57□□□□□ -1.2
CAPN3-216ENST00000567071 LPAR5Q9H1C0 372 aa7.57□□□□□ -1.2
CAPN3-216ENST00000567071 WDR13Q9H1Z4 485 aa7.57□□□□□ -1.2
CAPN3-216ENST00000567071 GHITMQ9H3K2 345 aa7.57□□□□□ -1.2
CAPN3-216ENST00000567071 ZNF581Q9P0T4 197 aa7.57□□□□□ -1.2
CAPN3-216ENST00000567071 EXTL2Q9UBQ6 330 aa7.57□□□□□ -1.2
CAPN3-216ENST00000567071 GHRLQ9UBU3 117 aa7.57□□□□□ -1.2
CAPN3-216ENST00000567071 RAB22AQ9UL26 194 aa7.57□□□□□ -1.2
CAPN3-216ENST00000567071 KLK5Q9Y337 293 aaPredicted RBP7.57□□□□□ -1.2
CAPN3-216ENST00000567071 MINOS1-NBL1R4GNA1 71 aa7.57□□□□□ -1.2
CAPN3-216ENST00000567071 SH2D7A6NKC9 451 aaPredicted RBP7.56□□□□□ -1.2
CAPN3-216ENST00000567071 ODF3BA8MYP8 253 aa7.56□□□□□ -1.2
CAPN3-216ENST00000567071 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.56□□□□□ -1.2
CAPN3-216ENST00000567071 GEMIN2O14893 280 aaKnown RBP7.56□□□□□ -1.2
CAPN3-216ENST00000567071 PSPNO60542 156 aa7.56□□□□□ -1.2
CAPN3-216ENST00000567071 ZNF780AO75290 641 aaPredicted RBP7.56□□□□□ -1.2
CAPN3-216ENST00000567071 TFF1P04155 84 aa7.56□□□□□ -1.2
CAPN3-216ENST00000567071 ACAA1P09110 424 aaPredicted RBP7.56□□□□□ -1.2
CAPN3-216ENST00000567071 OR8U8P0C7N1 319 aa7.56□□□□□ -1.2
CAPN3-216ENST00000567071 GTF2F2P13984 249 aa7.56□□□□□ -1.2
CAPN3-216ENST00000567071 AMY2BP19961 511 aa7.56□□□□□ -1.2
CAPN3-216ENST00000567071 RAB6AP20340 208 aa7.56□□□□□ -1.2
CAPN3-216ENST00000567071 CDK2P24941 298 aa7.56□□□□□ -1.2
CAPN3-216ENST00000567071 RANBP1P43487 201 aa7.56□□□□□ -1.2
CAPN3-216ENST00000567071 RBM11P57052 281 aaKnown RBP7.56□□□□□ -1.2
CAPN3-216ENST00000567071 ERVK11-1P61568 191 aa7.56□□□□□ -1.2
CAPN3-216ENST00000567071 RPL31P62899 125 aaKnown RBP7.56□□□□□ -1.2
CAPN3-216ENST00000567071 RPS27AP62979 156 aaKnown RBP7.56□□□□□ -1.2
CAPN3-216ENST00000567071 GPR176Q14439 515 aa7.56□□□□□ -1.2
CAPN3-216ENST00000567071 SMIM21Q3B7S5 101 aa7.56□□□□□ -1.2
CAPN3-216ENST00000567071 ELP2Q6IA86 826 aa7.56□□□□□ -1.2
CAPN3-216ENST00000567071 TEX38Q6PEX7 206 aa7.56□□□□□ -1.2
CAPN3-216ENST00000567071 Q8IYB0 196 aa7.56□□□□□ -1.2
CAPN3-216ENST00000567071 OR10Z1Q8NGY1 313 aa7.56□□□□□ -1.2
CAPN3-216ENST00000567071 Q96M66 194 aa7.56□□□□□ -1.2
CAPN3-216ENST00000567071 RBM14Q96PK6 669 aaKnown RBP7.56□□□□□ -1.2
CAPN3-216ENST00000567071 TSC22D3Q99576 134 aa7.56□□□□□ -1.2
CAPN3-216ENST00000567071 URM1Q9BTM9 101 aaKnown RBP7.56□□□□□ -1.2
CAPN3-216ENST00000567071 TUBA4BQ9H853 241 aa7.56□□□□□ -1.2
CAPN3-216ENST00000567071 OR14J1Q9UGF5 321 aa7.56□□□□□ -1.2
CAPN3-216ENST00000567071 ST3GAL6Q9Y274 331 aa7.56□□□□□ -1.2
CAPN3-216ENST00000567071 UBR4Q5T4S7 5183 aa7.56□□□□□ -1.2
CAPN3-216ENST00000567071 METTL21EPA6NDL7 271 aa7.55□□□□□ -1.2
CAPN3-216ENST00000567071 SOCS1O15524 211 aa7.55□□□□□ -1.2
CAPN3-216ENST00000567071 OR7C1O76099 320 aaPredicted RBP7.55□□□□□ -1.2
CAPN3-216ENST00000567071 TALDO1P37837 337 aa7.55□□□□□ -1.2
CAPN3-216ENST00000567071 CDX1P47902 265 aaPredicted RBP7.55□□□□□ -1.2
CAPN3-216ENST00000567071 SCN1BQ07699 218 aa7.55□□□□□ -1.2
CAPN3-216ENST00000567071 LSAMPQ13449 338 aa7.55□□□□□ -1.2
CAPN3-216ENST00000567071 PMS2P11Q13670 270 aa7.55□□□□□ -1.2
CAPN3-216ENST00000567071 RNASE12Q5GAN4 147 aaKnown RBP7.55□□□□□ -1.2
CAPN3-216ENST00000567071 SPANXN2Q5MJ10 180 aa7.55□□□□□ -1.2
CAPN3-216ENST00000567071 TMEM69Q5SWH9 247 aa7.55□□□□□ -1.2
CAPN3-216ENST00000567071 FAM131AQ6UXB0 335 aa7.55□□□□□ -1.2
CAPN3-216ENST00000567071 ACP7Q6ZNF0 438 aa7.55□□□□□ -1.2
CAPN3-216ENST00000567071 FOXRED2Q8IWF2 684 aa7.55□□□□□ -1.2
CAPN3-216ENST00000567071 MFSD4AQ8N468 514 aa7.55□□□□□ -1.2
CAPN3-216ENST00000567071 CHST4Q8NCG5 386 aa7.55□□□□□ -1.2
CAPN3-216ENST00000567071 PTX4Q96A99 478 aa7.55□□□□□ -1.2
CAPN3-216ENST00000567071 S100A16Q96FQ6 103 aaKnown RBP7.55□□□□□ -1.2
CAPN3-216ENST00000567071 NOL4LQ96MY1 436 aaPredicted RBP7.55□□□□□ -1.2
CAPN3-216ENST00000567071 TM2D1Q9BX74 207 aa7.55□□□□□ -1.2
CAPN3-216ENST00000567071 ABCG5Q9H222 651 aa7.55□□□□□ -1.2
CAPN3-216ENST00000567071 HES4Q9HCC6 221 aa7.55□□□□□ -1.2
CAPN3-216ENST00000567071 HMG20AQ9NP66 347 aa7.55□□□□□ -1.2
CAPN3-216ENST00000567071 AKIP1Q9NQ31 210 aa7.55□□□□□ -1.2
CAPN3-216ENST00000567071 PCDHB16Q9NRJ7 776 aa7.55□□□□□ -1.2
CAPN3-216ENST00000567071 C19orf12Q9NSK7 152 aa7.55□□□□□ -1.2
CAPN3-216ENST00000567071 MRPS7Q9Y2R9 242 aaKnown RBP7.55□□□□□ -1.2
CAPN3-216ENST00000567071 TRAV18A0A075B6X5 111 aa7.54□□□□□ -1.2
CAPN3-216ENST00000567071 RAB27BO00194 218 aa7.54□□□□□ -1.2
CAPN3-216ENST00000567071 SIRPB1O00241 398 aa7.54□□□□□ -1.2
CAPN3-216ENST00000567071 HSPB6O14558 160 aa7.54□□□□□ -1.2
CAPN3-216ENST00000567071 NOS1APO75052 506 aaPredicted RBP7.54□□□□□ -1.2
CAPN3-216ENST00000567071 RPLP1P05386 114 aaKnown RBP7.54□□□□□ -1.2
CAPN3-216ENST00000567071 IGHV1-8P0DP01 117 aa7.54□□□□□ -1.2
CAPN3-216ENST00000567071 PTHLHP12272 177 aa7.54□□□□□ -1.2
CAPN3-216ENST00000567071 ZNF44P15621 663 aa7.54□□□□□ -1.2
CAPN3-216ENST00000567071 CD24P25063 80 aa7.54□□□□□ -1.2
CAPN3-216ENST00000567071 BLVRBP30043 206 aaPredicted RBP7.54□□□□□ -1.2
CAPN3-216ENST00000567071 FHL3Q13643 280 aa7.54□□□□□ -1.2
CAPN3-216ENST00000567071 IL18Q14116 193 aa7.54□□□□□ -1.2
CAPN3-216ENST00000567071 ATAD3CQ5T2N8 411 aa7.54□□□□□ -1.2
CAPN3-216ENST00000567071 TMEM200BQ69YZ2 307 aa7.54□□□□□ -1.2
CAPN3-216ENST00000567071 LGALS9CQ6DKI2 356 aa7.54□□□□□ -1.2
CAPN3-216ENST00000567071 SIGIRRQ6IA17 410 aa7.54□□□□□ -1.2
CAPN3-216ENST00000567071 CCDC190Q86UF4 302 aa7.54□□□□□ -1.2
CAPN3-216ENST00000567071 SNX29P2Q8IUI4 249 aa7.54□□□□□ -1.2
CAPN3-216ENST00000567071 LINC00528Q8N1L1 170 aa7.54□□□□□ -1.2
CAPN3-216ENST00000567071 FAM71E2Q8N5Q1 922 aa7.54□□□□□ -1.2
CAPN3-216ENST00000567071 ZNRF1Q8ND25 227 aa7.54□□□□□ -1.2
CAPN3-216ENST00000567071 OR11H6Q8NGC7 330 aa7.54□□□□□ -1.2
CAPN3-216ENST00000567071 OR56B1Q8NGI3 324 aa7.54□□□□□ -1.2
CAPN3-216ENST00000567071 OR10R2Q8NGX6 335 aa7.54□□□□□ -1.2
CAPN3-216ENST00000567071 ANGPTL6Q8NI99 470 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms