RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 ZNF324O75467 553 aaPredicted RBP0.92□□□□□ -2.26
PRPF39-208ENST00000554785 RP2O75695 350 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 H6PDO95479 791 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 CYB5R3P00387 301 aaPredicted RBP0.92□□□□□ -2.26
PRPF39-208ENST00000554785 PAHP00439 452 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 IGKV1D-16P01601 117 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 HLA-DPB1P04440 258 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 GYPCP04921 128 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 IFNW1P05000 195 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 C8GP07360 202 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 IL3P08700 152 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 ACSM4P0C7M7 580 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 SLC35E2BP0CK96 405 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 MPC1LP0DKB6 136 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 OR12D1P0DN82 309 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 IGFBP3P17936 291 aaPredicted RBP0.92□□□□□ -2.26
PRPF39-208ENST00000554785 PGAM1P18669 254 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 RAB3BP20337 219 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 RPS3P23396 243 aaKnown RBP eCLIP0.92□□□□□ -2.264e-8■■■■□ 19.6
PRPF39-208ENST00000554785 F2RP25116 425 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 GABRA3P34903 492 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 GPX4P36969 197 aaPredicted RBP0.92□□□□□ -2.26
PRPF39-208ENST00000554785 MAGEA1P43355 309 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 EVX1P49640 407 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 RAB13P51153 203 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 PRRX1P54821 245 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 RAP1AP62834 184 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 SLC35A2P78381 396 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 MERTKQ12866 999 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 BNIP2Q12982 314 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 ERCC8Q13216 396 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 SLAQ13239 276 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 MAB21L1Q13394 359 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 FAM83EQ2M2I3 478 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 ARHGAP11BQ3KRB8 267 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 TTMPQ5BVD1 217 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 SAXO2Q658L1 398 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 KRTAP5-7Q6L8G8 165 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 C3orf33Q6P1S2 294 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 MED27Q6P2C8 311 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 MDP1Q86V88 176 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 CMTM1Q8IZ96 169 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 PGAM4Q8N0Y7 254 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 OR5AS1Q8N127 324 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 C15orf56Q8N910 161 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 NOXO1Q8NFA2 376 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 TTLQ8NG68 377 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 OR4S1Q8NGB4 309 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 OR10G2Q8NGC3 310 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 OR5D16Q8NGK9 328 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 OR5W2Q8NH69 310 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 OR5AK3PQ8NH89 298 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 ZNF563Q8TA94 476 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 FAM81AQ8TBF8 368 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 C17orf50Q8WW18 174 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 ZNF75CPQ92670 426 aaPredicted RBP0.92□□□□□ -2.26
PRPF39-208ENST00000554785 RORBQ92753 470 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 MCUR1Q96AQ8 359 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 ISOC1Q96CN7 298 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 LRRC39Q96DD0 335 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 OR5B12Q96R08 314 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 DOK1Q99704 481 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 ZNF649Q9BS31 505 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 NDFIP1Q9BT67 221 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 ANP32EQ9BTT0 268 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 EMC6Q9BV81 110 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 ZNF717Q9BY31 904 aaPredicted RBP0.92□□□□□ -2.26
PRPF39-208ENST00000554785 IL22Q9GZX6 179 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 RPP21Q9H633 154 aaKnown RBP0.92□□□□□ -2.26
PRPF39-208ENST00000554785 LYRM4Q9HD34 91 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 CYTL1Q9NRR1 136 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 TAS2R9Q9NYW1 312 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 UVRAGQ9P2Y5 699 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 FBXO5Q9UKT4 447 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.92□□□□□ -2.26
PRPF39-208ENST00000554785 ZNF780BQ9Y6R6 833 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 IGKV2-28A0A075B6P5 120 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 A0A075B6Q4 140 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 LYRM9A8MSI8 78 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 NDUFAB1O14561 156 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 ACOX3O15254 700 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 EIF3HO15372 352 aaKnown RBP eCLIP0.91□□□□□ -2.26
PRPF39-208ENST00000554785 NUPL2O15504 423 aaKnown RBP0.91□□□□□ -2.26
PRPF39-208ENST00000554785 FOXH1O75593 365 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 STK16O75716 305 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 BRI3O95415 125 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 IGKV2D-28P01615 120 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 IGHMP01871 453 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 TFF1P04155 84 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 BCHEP06276 602 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 OR5H8P0DN80 308 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 MYL2P10916 166 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 GFAPP14136 432 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 OGNP20774 298 aaKnown RBP0.91□□□□□ -2.26
PRPF39-208ENST00000554785 CD24P25063 80 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 DCKP27707 260 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 CEACAM3P40198 252 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 PPICP45877 212 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 RND2P52198 227 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 ZNF138P52744 262 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms