RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 UBBP0CG47 229 aa5.58□□□□□ -1.52
COL9A1-209ENST00000489861 CALCBP10092 127 aa5.58□□□□□ -1.52
COL9A1-209ENST00000489861 ARSBP15848 533 aa5.58□□□□□ -1.52
COL9A1-209ENST00000489861 SERPINA2P20848 420 aa5.58□□□□□ -1.52
COL9A1-209ENST00000489861 CD40LGP29965 261 aa5.58□□□□□ -1.52
COL9A1-209ENST00000489861 GNG10P50151 68 aa5.58□□□□□ -1.52
COL9A1-209ENST00000489861 ETV1P50549 477 aa5.58□□□□□ -1.52
COL9A1-209ENST00000489861 WNT4P56705 351 aa5.58□□□□□ -1.52
COL9A1-209ENST00000489861 ST3GAL4Q11206 333 aa5.58□□□□□ -1.52
COL9A1-209ENST00000489861 FOXE3Q13461 319 aa5.58□□□□□ -1.52
COL9A1-209ENST00000489861 GPR50Q13585 617 aa5.58□□□□□ -1.52
COL9A1-209ENST00000489861 EBI3Q14213 229 aa5.58□□□□□ -1.52
COL9A1-209ENST00000489861 TRAM1Q15629 374 aa5.58□□□□□ -1.52
COL9A1-209ENST00000489861 ATAD3CQ5T2N8 411 aa5.58□□□□□ -1.52
COL9A1-209ENST00000489861 RSBN1Q5VWQ0 802 aaPredicted RBP5.58□□□□□ -1.52
COL9A1-209ENST00000489861 DMKNQ6E0U4 476 aaPredicted RBP5.58□□□□□ -1.52
COL9A1-209ENST00000489861 FAM53AQ6NSI3 398 aaPredicted RBP5.58□□□□□ -1.52
COL9A1-209ENST00000489861 JAGN1Q8N5M9 183 aa5.58□□□□□ -1.52
COL9A1-209ENST00000489861 RNF152Q8N8N0 203 aa5.58□□□□□ -1.52
COL9A1-209ENST00000489861 SUMF2Q8NBJ7 301 aa5.58□□□□□ -1.52
COL9A1-209ENST00000489861 OR6Q1Q8NGQ2 317 aa5.58□□□□□ -1.52
COL9A1-209ENST00000489861 APH1BQ8WW43 257 aa5.58□□□□□ -1.52
COL9A1-209ENST00000489861 GHSRQ92847 366 aa5.58□□□□□ -1.52
COL9A1-209ENST00000489861 ARL11Q969Q4 196 aa5.58□□□□□ -1.52
COL9A1-209ENST00000489861 ZNF184Q99676 751 aaPredicted RBP5.58□□□□□ -1.52
COL9A1-209ENST00000489861 UQCC2Q9BRT2 126 aa5.58□□□□□ -1.52
COL9A1-209ENST00000489861 MND1Q9BWT6 205 aa5.58□□□□□ -1.52
COL9A1-209ENST00000489861 ABCG5Q9H222 651 aa5.58□□□□□ -1.52
COL9A1-209ENST00000489861 GHITMQ9H3K2 345 aa5.58□□□□□ -1.52
COL9A1-209ENST00000489861 PLCXD1Q9NUJ7 323 aa5.58□□□□□ -1.52
COL9A1-209ENST00000489861 TRAPPC2LQ9UL33 140 aa5.58□□□□□ -1.52
COL9A1-209ENST00000489861 RNF150Q9ULK6 438 aa5.58□□□□□ -1.52
COL9A1-209ENST00000489861 PSG11Q9UQ72 335 aa5.58□□□□□ -1.52
COL9A1-209ENST00000489861 DNAH5Q8TE73 4624 aa5.57□□□□□ -1.52
COL9A1-209ENST00000489861 TRAV24A0A0B4J272 114 aa5.57□□□□□ -1.52
COL9A1-209ENST00000489861 IGHV1-3A0A0C4DH29 117 aa5.57□□□□□ -1.52
COL9A1-209ENST00000489861 TRBV5-5A0A0J9YX44 114 aa5.57□□□□□ -1.52
COL9A1-209ENST00000489861 FAM172BPA6NC97 362 aa5.57□□□□□ -1.52
COL9A1-209ENST00000489861 E9PI62 339 aa5.57□□□□□ -1.52
COL9A1-209ENST00000489861 IGFBP3P17936 291 aaPredicted RBP5.57□□□□□ -1.52
COL9A1-209ENST00000489861 SOX6P35712 828 aa5.57□□□□□ -1.52
COL9A1-209ENST00000489861 GTF2A1P52655 376 aaPredicted RBP5.57□□□□□ -1.52
COL9A1-209ENST00000489861 ADARB1P78563 741 aaKnown RBP5.57□□□□□ -1.52
COL9A1-209ENST00000489861 GABPB1Q06547 395 aaPredicted RBP5.57□□□□□ -1.52
COL9A1-209ENST00000489861 RCN1Q15293 331 aa5.57□□□□□ -1.52
COL9A1-209ENST00000489861 LTC4SQ16873 150 aa5.57□□□□□ -1.52
COL9A1-209ENST00000489861 LRRC36Q1X8D7 754 aa5.57□□□□□ -1.52
COL9A1-209ENST00000489861 SLC22A6Q4U2R8 563 aa5.57□□□□□ -1.52
COL9A1-209ENST00000489861 OR2G6Q5TZ20 316 aa5.57□□□□□ -1.52
COL9A1-209ENST00000489861 GLT8D1Q68CQ7 371 aa5.57□□□□□ -1.52
COL9A1-209ENST00000489861 AWAT2Q6E213 333 aa5.57□□□□□ -1.52
COL9A1-209ENST00000489861 ACSM6Q6P461 480 aa5.57□□□□□ -1.52
COL9A1-209ENST00000489861 LINC00322Q6ZN03 302 aaPredicted RBP5.57□□□□□ -1.52
COL9A1-209ENST00000489861 Q8N1X5 172 aa5.57□□□□□ -1.52
COL9A1-209ENST00000489861 TCTEX1D1Q8N7M0 179 aa5.57□□□□□ -1.52
COL9A1-209ENST00000489861 OR13A1Q8NGR1 328 aa5.57□□□□□ -1.52
COL9A1-209ENST00000489861 OR1N2Q8NGR9 330 aa5.57□□□□□ -1.52
COL9A1-209ENST00000489861 DLX4Q92988 240 aaPredicted RBP5.57□□□□□ -1.52
COL9A1-209ENST00000489861 PPIL3Q9H2H8 161 aaKnown RBP5.57□□□□□ -1.52
COL9A1-209ENST00000489861 GFOD1Q9NXC2 390 aa5.57□□□□□ -1.52
COL9A1-209ENST00000489861 GNG12Q9UBI6 72 aa5.57□□□□□ -1.52
COL9A1-209ENST00000489861 AASSQ9UDR5 926 aa5.57□□□□□ -1.52
COL9A1-209ENST00000489861 MRPS28Q9Y2Q9 187 aaKnown RBP5.57□□□□□ -1.52
COL9A1-209ENST00000489861 TPRKBQ9Y3C4 175 aa5.57□□□□□ -1.52
COL9A1-209ENST00000489861 PRSS29PA6NIE9 313 aa5.56□□□□□ -1.52
COL9A1-209ENST00000489861 I3L521 148 aa5.56□□□□□ -1.52
COL9A1-209ENST00000489861 GEMIN2O14893 280 aaKnown RBP5.56□□□□□ -1.52
COL9A1-209ENST00000489861 CASQ2O14958 399 aaPredicted RBP5.56□□□□□ -1.52
COL9A1-209ENST00000489861 LANCL1O43813 399 aa5.56□□□□□ -1.52
COL9A1-209ENST00000489861 CDRT1O95170 752 aa5.56□□□□□ -1.52
COL9A1-209ENST00000489861 BPNT1O95861 308 aa5.56□□□□□ -1.52
COL9A1-209ENST00000489861 CGB3P0DN86 165 aa5.56□□□□□ -1.52
COL9A1-209ENST00000489861 CGB7P0DN87 165 aa5.56□□□□□ -1.52
COL9A1-209ENST00000489861 CELP19835 753 aa5.56□□□□□ -1.52
COL9A1-209ENST00000489861 FUT3P21217 361 aa5.56□□□□□ -1.52
COL9A1-209ENST00000489861 PSMA1P25786 263 aaKnown RBP5.56□□□□□ -1.52
COL9A1-209ENST00000489861 SSTR5P35346 364 aa5.56□□□□□ -1.52
COL9A1-209ENST00000489861 HSPA13P48723 471 aa5.56□□□□□ -1.52
COL9A1-209ENST00000489861 ZNF137PP52743 207 aa5.56□□□□□ -1.52
COL9A1-209ENST00000489861 GNB1P62873 340 aa5.56□□□□□ -1.52
COL9A1-209ENST00000489861 ZNF616Q08AN1 781 aa5.56□□□□□ -1.52
COL9A1-209ENST00000489861 TMEM267Q0VDI3 215 aaPredicted RBP5.56□□□□□ -1.52
COL9A1-209ENST00000489861 SMN1Q16637 294 aaKnown RBP5.56□□□□□ -1.52
COL9A1-209ENST00000489861 PIGYQ3MUY2 71 aa5.56□□□□□ -1.52
COL9A1-209ENST00000489861 OGFRL1Q5TC84 451 aaPredicted RBP5.56□□□□□ -1.52
COL9A1-209ENST00000489861 PYHIN1Q6K0P9 492 aa5.56□□□□□ -1.52
COL9A1-209ENST00000489861 FAM71F2Q6NXP2 309 aa5.56□□□□□ -1.52
COL9A1-209ENST00000489861 GLIPR1L1Q6UWM5 242 aa5.56□□□□□ -1.52
COL9A1-209ENST00000489861 BPIFB6Q8NFQ5 453 aa5.56□□□□□ -1.52
COL9A1-209ENST00000489861 RTN4IP1Q8WWV3 396 aaPredicted RBP5.56□□□□□ -1.52
COL9A1-209ENST00000489861 PHYHIPQ92561 330 aa5.56□□□□□ -1.52
COL9A1-209ENST00000489861 GGHQ92820 318 aa5.56□□□□□ -1.52
COL9A1-209ENST00000489861 EAF1Q96JC9 268 aaPredicted RBP5.56□□□□□ -1.52
COL9A1-209ENST00000489861 NEDD4LQ96PU5 975 aa5.56□□□□□ -1.52
COL9A1-209ENST00000489861 ZNF251Q9BRH9 671 aa5.56□□□□□ -1.52
COL9A1-209ENST00000489861 TMED9Q9BVK6 235 aa5.56□□□□□ -1.52
COL9A1-209ENST00000489861 TUBA4BQ9H853 241 aa5.56□□□□□ -1.52
COL9A1-209ENST00000489861 GNB4Q9HAV0 340 aa5.56□□□□□ -1.52
COL9A1-209ENST00000489861 ETAA1Q9NY74 926 aa5.56□□□□□ -1.52
COL9A1-209ENST00000489861 ABRACLQ9P1F3 81 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms