RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 H3BTX0 84 aa13.35□□□□□ -0.27
PKD1-220ENST00000487932 MMP9P14780 707 aa13.35□□□□□ -0.27
PKD1-220ENST00000487932 DUSP15Q9H1R2 295 aaPredicted RBP13.35□□□□□ -0.27
PKD1-220ENST00000487932 KBTBD11O94819 623 aa13.35□□□□□ -0.27
PKD1-220ENST00000487932 PGLYRP4Q96LB8 373 aa13.35□□□□□ -0.27
PKD1-220ENST00000487932 HSPB7Q9UBY9 170 aa13.35□□□□□ -0.27
PKD1-220ENST00000487932 C4AP0C0L4 1744 aa13.35□□□□□ -0.27
PKD1-220ENST00000487932 IGHV3OR16-13A0A075B7E8 117 aa13.34□□□□□ -0.27
PKD1-220ENST00000487932 IGHV3-74A0A0B4J1X5 117 aa13.34□□□□□ -0.27
PKD1-220ENST00000487932 TGIF1Q15583 401 aa13.34□□□□□ -0.27
PKD1-220ENST00000487932 AWAT1Q58HT5 328 aa13.34□□□□□ -0.27
PKD1-220ENST00000487932 C9JCJ5 164 aa13.34□□□□□ -0.27
PKD1-220ENST00000487932 LOC105371242A0A075B767 164 aa13.34□□□□□ -0.27
PKD1-220ENST00000487932 UPK3AO75631 287 aa13.34□□□□□ -0.27
PKD1-220ENST00000487932 KCNK17Q96T54 332 aa13.34□□□□□ -0.27
PKD1-220ENST00000487932 AKIP1Q9NQ31 210 aa13.34□□□□□ -0.27
PKD1-220ENST00000487932 PPIAL4CA0A0B4J2A2 164 aa13.34□□□□□ -0.27
PKD1-220ENST00000487932 PPIAL4GP0DN37 164 aa13.34□□□□□ -0.27
PKD1-220ENST00000487932 OR10J1P30954 320 aa13.34□□□□□ -0.27
PKD1-220ENST00000487932 LILRA6Q6PI73 481 aa13.34□□□□□ -0.27
PKD1-220ENST00000487932 SLC16A13Q7RTY0 426 aa13.34□□□□□ -0.27
PKD1-220ENST00000487932 CALHM1Q8IU99 346 aa13.34□□□□□ -0.27
PKD1-220ENST00000487932 NEU1Q99519 415 aa13.34□□□□□ -0.27
PKD1-220ENST00000487932 YAE1D1Q9NRH1 226 aa13.34□□□□□ -0.27
PKD1-220ENST00000487932 SCN11AQ9UI33 1791 aa13.34□□□□□ -0.27
PKD1-220ENST00000487932 ASPDHA6ND91 283 aa13.34□□□□□ -0.27
PKD1-220ENST00000487932 SPINT1O43278 529 aa13.34□□□□□ -0.27
PKD1-220ENST00000487932 IGHV4-34P06331 123 aa13.34□□□□□ -0.27
PKD1-220ENST00000487932 ATG4DQ86TL0 474 aaPredicted RBP13.33□□□□□ -0.27
PKD1-220ENST00000487932 ANKRD20A5PA0PJZ0 165 aa13.33□□□□□ -0.28
PKD1-220ENST00000487932 SUMO2P61956 95 aaKnown RBP13.33□□□□□ -0.28
PKD1-220ENST00000487932 DCAF12L2Q5VW00 463 aa13.33□□□□□ -0.28
PKD1-220ENST00000487932 WDFY1Q8IWB7 410 aa13.33□□□□□ -0.28
PKD1-220ENST00000487932 GPR82Q96P67 336 aa13.33□□□□□ -0.28
PKD1-220ENST00000487932 PGPEP1Q9NXJ5 209 aa13.33□□□□□ -0.28
PKD1-220ENST00000487932 LEUTXA8MZ59 168 aa13.33□□□□□ -0.28
PKD1-220ENST00000487932 TMEM127O75204 238 aa13.33□□□□□ -0.28
PKD1-220ENST00000487932 OR2A4O95047 310 aa13.33□□□□□ -0.28
PKD1-220ENST00000487932 IL11P20809 199 aa13.33□□□□□ -0.28
PKD1-220ENST00000487932 ANOS1P23352 680 aa13.33□□□□□ -0.28
PKD1-220ENST00000487932 OR2A7Q96R45 310 aa13.33□□□□□ -0.28
PKD1-220ENST00000487932 BRWD1Q9NSI6 2320 aa13.33□□□□□ -0.28
PKD1-220ENST00000487932 HBZP02008 142 aa13.33□□□□□ -0.28
PKD1-220ENST00000487932 C11orf91Q3C1V1 193 aa13.33□□□□□ -0.28
PKD1-220ENST00000487932 COL5A1-AS1Q5SY13 56 aa13.33□□□□□ -0.28
PKD1-220ENST00000487932 GEMIN7Q9H840 131 aaKnown RBP13.33□□□□□ -0.28
PKD1-220ENST00000487932 C9orf40Q8IXQ3 194 aa13.33□□□□□ -0.28
PKD1-220ENST00000487932 LHFPL5Q8TAF8 219 aa13.33□□□□□ -0.28
PKD1-220ENST00000487932 ANGPTL4Q9BY76 406 aa13.33□□□□□ -0.28
PKD1-220ENST00000487932 PGA4P0DJD7 388 aa13.33□□□□□ -0.28
PKD1-220ENST00000487932 PGA5P0DJD9 388 aa13.33□□□□□ -0.28
PKD1-220ENST00000487932 MDKP21741 143 aaPredicted RBP13.33□□□□□ -0.28
PKD1-220ENST00000487932 NUDT16L1Q9BRJ7 211 aaKnown RBP13.33□□□□□ -0.28
PKD1-220ENST00000487932 IGHV3-49A0A0A0MS15 119 aa13.32□□□□□ -0.28
PKD1-220ENST00000487932 VSIG10L2P0DP72 767 aa13.32□□□□□ -0.28
PKD1-220ENST00000487932 STPG3Q8N7X2 389 aa13.32□□□□□ -0.28
PKD1-220ENST00000487932 ZIC3O60481 467 aa13.32□□□□□ -0.28
PKD1-220ENST00000487932 ACAA1P09110 424 aaPredicted RBP13.32□□□□□ -0.28
PKD1-220ENST00000487932 PCSK4Q6UW60 755 aa13.32□□□□□ -0.28
PKD1-220ENST00000487932 SCNM1Q9BWG6 230 aa13.32□□□□□ -0.28
PKD1-220ENST00000487932 TRAV8-7A0A075B6U6 113 aa13.32□□□□□ -0.28
PKD1-220ENST00000487932 A0A1W2PQD3 144 aa13.32□□□□□ -0.28
PKD1-220ENST00000487932 CACNA1SQ13698 1873 aa13.32□□□□□ -0.28
PKD1-220ENST00000487932 SLC25A17O43808 307 aa13.32□□□□□ -0.28
PKD1-220ENST00000487932 MFAP2P55001 183 aa13.32□□□□□ -0.28
PKD1-220ENST00000487932 CIRBPQ14011 172 aaKnown RBP13.32□□□□□ -0.28
PKD1-220ENST00000487932 OR4C13Q8NGP0 309 aa13.32□□□□□ -0.28
PKD1-220ENST00000487932 COX14Q96I36 57 aa13.32□□□□□ -0.28
PKD1-220ENST00000487932 PXMP4Q9Y6I8 212 aa13.32□□□□□ -0.28
PKD1-220ENST00000487932 OTX1P32242 354 aaPredicted RBP13.32□□□□□ -0.28
PKD1-220ENST00000487932 SGMS2Q8NHU3 365 aa13.32□□□□□ -0.28
PKD1-220ENST00000487932 IGHV3-48P01763 117 aa13.31□□□□□ -0.28
PKD1-220ENST00000487932 LINC00869P0C866 280 aa13.31□□□□□ -0.28
PKD1-220ENST00000487932 AQP10Q96PS8 301 aa13.31□□□□□ -0.28
PKD1-220ENST00000487932 RECKO95980 971 aa13.31□□□□□ -0.28
PKD1-220ENST00000487932 HIST1H4GQ99525 98 aa13.31□□□□□ -0.28
PKD1-220ENST00000487932 PITPNC1Q9UKF7 332 aa13.31□□□□□ -0.28
PKD1-220ENST00000487932 F11RQ9Y624 299 aaKnown RBP13.31□□□□□ -0.28
PKD1-220ENST00000487932 PGPA6NDG6 321 aa13.31□□□□□ -0.28
PKD1-220ENST00000487932 HPRT1P00492 218 aa13.31□□□□□ -0.28
PKD1-220ENST00000487932 ZIC1Q15915 447 aa13.31□□□□□ -0.28
PKD1-220ENST00000487932 MARVELD3Q96A59 401 aa13.31□□□□□ -0.28
PKD1-220ENST00000487932 RNF115Q9Y4L5 304 aa13.31□□□□□ -0.28
PKD1-220ENST00000487932 RP1L1Q8IWN7 2480 aaPredicted RBP13.31□□□□□ -0.28
PKD1-220ENST00000487932 TMEM218A2RU14 115 aa13.31□□□□□ -0.28
PKD1-220ENST00000487932 FAM214BQ7L5A3 538 aa13.31□□□□□ -0.28
PKD1-220ENST00000487932 ZAR1Q86SH2 424 aa13.31□□□□□ -0.28
PKD1-220ENST00000487932 FAM131CQ96AQ9 280 aa13.31□□□□□ -0.28
PKD1-220ENST00000487932 LCN2P80188 198 aa13.31□□□□□ -0.28
PKD1-220ENST00000487932 SIGIRRQ6IA17 410 aa13.31□□□□□ -0.28
PKD1-220ENST00000487932 MRPL30Q8TCC3 161 aaKnown RBP13.31□□□□□ -0.28
PKD1-220ENST00000487932 S4R3C0 116 aa13.31□□□□□ -0.28
PKD1-220ENST00000487932 ISG15P05161 165 aa13.3□□□□□ -0.28
PKD1-220ENST00000487932 MFAP4P55083 255 aa13.3□□□□□ -0.28
PKD1-220ENST00000487932 HIST1H1AQ02539 215 aaPredicted RBP13.3□□□□□ -0.28
PKD1-220ENST00000487932 SMRP1Q8NCR6 262 aa13.3□□□□□ -0.28
PKD1-220ENST00000487932 RBFOX2O43251 390 aaKnown RBP eCLIP13.3□□□□□ -0.283e-7■■■□□ 15.2
PKD1-220ENST00000487932 CTSSP25774 331 aa13.3□□□□□ -0.28
PKD1-220ENST00000487932 RAB9AP51151 201 aa13.3□□□□□ -0.28
PKD1-220ENST00000487932 SNRPD3P62318 126 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms