RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 LANCL1O43813 399 aa18.25■□□□□ 0.51
PTPN4-208ENST00000460289 MOSP00540 346 aa18.25■□□□□ 0.51
PTPN4-208ENST00000460289 RAB3BP20337 219 aa18.25■□□□□ 0.51
PTPN4-208ENST00000460289 PSMB9P28065 219 aa18.25■□□□□ 0.51
PTPN4-208ENST00000460289 TMEM50BP56557 158 aa18.25■□□□□ 0.51
PTPN4-208ENST00000460289 DEFA6Q01524 100 aa18.25■□□□□ 0.51
PTPN4-208ENST00000460289 GNMTQ14749 295 aa18.25■□□□□ 0.51
PTPN4-208ENST00000460289 C5orf24Q7Z6I8 188 aa18.25■□□□□ 0.51
PTPN4-208ENST00000460289 OR2AK2Q8NG84 335 aa18.25■□□□□ 0.51
PTPN4-208ENST00000460289 OR4X2Q8NGF9 303 aa18.25■□□□□ 0.51
PTPN4-208ENST00000460289 IL1F10Q8WWZ1 152 aa18.25■□□□□ 0.51
PTPN4-208ENST00000460289 CMYA5Q8N3K9 4069 aa18.24■□□□□ 0.51
PTPN4-208ENST00000460289 TMEM272A0A1B0GTI8 110 aa18.24■□□□□ 0.51
PTPN4-208ENST00000460289 IFITM5A6NNB3 132 aa18.24■□□□□ 0.51
PTPN4-208ENST00000460289 Q8N6K4 173 aa18.24■□□□□ 0.51
PTPN4-208ENST00000460289 OR8H1Q8NGG4 311 aa18.24■□□□□ 0.51
PTPN4-208ENST00000460289 R3HDM4Q96D70 268 aa18.24■□□□□ 0.51
PTPN4-208ENST00000460289 ARHGAP5-AS1Q96IT6 56 aa18.24■□□□□ 0.51
PTPN4-208ENST00000460289 TCRBV4S1A1TA0A5B7 111 aa18.23■□□□□ 0.51
PTPN4-208ENST00000460289 SHISA3A0PJX4 238 aa18.23■□□□□ 0.51
PTPN4-208ENST00000460289 C22orf42Q6IC83 251 aa18.23■□□□□ 0.51
PTPN4-208ENST00000460289 PECRQ9BY49 303 aa18.23■□□□□ 0.51
PTPN4-208ENST00000460289 C12orf4Q9NQ89 552 aa18.23■□□□□ 0.51
PTPN4-208ENST00000460289 ADARB2-AS1A8MUL3 147 aa18.22■□□□□ 0.51
PTPN4-208ENST00000460289 ZNF736B4DX44 427 aaPredicted RBP18.22■□□□□ 0.51
PTPN4-208ENST00000460289 IGHG2P01859 326 aa18.22■□□□□ 0.51
PTPN4-208ENST00000460289 FGF9P31371 208 aaPredicted RBP18.22■□□□□ 0.51
PTPN4-208ENST00000460289 OR10A3P58181 314 aa18.22■□□□□ 0.51
PTPN4-208ENST00000460289 ZNF773Q6PK81 442 aa18.22■□□□□ 0.51
PTPN4-208ENST00000460289 SLC35E3Q7Z769 313 aa18.22■□□□□ 0.51
PTPN4-208ENST00000460289 FOXRED2Q8IWF2 684 aa18.22■□□□□ 0.51
PTPN4-208ENST00000460289 CHPT1Q8WUD6 406 aa18.22■□□□□ 0.51
PTPN4-208ENST00000460289 CMSS1Q9BQ75 279 aaKnown RBP18.22■□□□□ 0.51
PTPN4-208ENST00000460289 LIN7CQ9NUP9 197 aaKnown RBP18.22■□□□□ 0.51
PTPN4-208ENST00000460289 RRP15Q9Y3B9 282 aaKnown RBP18.22■□□□□ 0.51
PTPN4-208ENST00000460289 TSSC4Q9Y5U2 329 aaPredicted RBP18.22■□□□□ 0.51
PTPN4-208ENST00000460289 PSMB11A5LHX3 300 aa18.21■□□□□ 0.51
PTPN4-208ENST00000460289 SERPINE3A8MV23 424 aa18.21■□□□□ 0.51
PTPN4-208ENST00000460289 MRPS15P82914 257 aaKnown RBP18.21■□□□□ 0.51
PTPN4-208ENST00000460289 TCTEX1D4Q5JR98 221 aa18.21■□□□□ 0.51
PTPN4-208ENST00000460289 PLAC9Q5JTB6 97 aa18.21■□□□□ 0.51
PTPN4-208ENST00000460289 Q6ZPA2 131 aa18.21■□□□□ 0.51
PTPN4-208ENST00000460289 ODF3L1Q8IXM7 274 aa18.21■□□□□ 0.51
PTPN4-208ENST00000460289 RASL11BQ9BPW5 248 aa18.21■□□□□ 0.51
PTPN4-208ENST00000460289 HDHD3Q9BSH5 251 aaPredicted RBP18.21■□□□□ 0.51
PTPN4-208ENST00000460289 GHITMQ9H3K2 345 aa18.21■□□□□ 0.51
PTPN4-208ENST00000460289 Q9N2K0 584 aa18.21■□□□□ 0.51
PTPN4-208ENST00000460289 PLSCR3Q9NRY6 295 aa18.21■□□□□ 0.51
PTPN4-208ENST00000460289 TXNL4BQ9NX01 149 aaKnown RBP18.21■□□□□ 0.51
PTPN4-208ENST00000460289 STUB1Q9UNE7 303 aa18.21■□□□□ 0.51
PTPN4-208ENST00000460289 WIPF1O43516 503 aa18.2■□□□□ 0.5
PTPN4-208ENST00000460289 RAB6AP20340 208 aa18.2■□□□□ 0.5
PTPN4-208ENST00000460289 ZBTB25P24278 435 aa18.2■□□□□ 0.5
PTPN4-208ENST00000460289 GADD45AP24522 165 aa18.2■□□□□ 0.5
PTPN4-208ENST00000460289 HLA-DRB3P79483 266 aa18.2■□□□□ 0.5
PTPN4-208ENST00000460289 LSAMPQ13449 338 aa18.2■□□□□ 0.5
PTPN4-208ENST00000460289 Q8N9W7 124 aa18.2■□□□□ 0.5
PTPN4-208ENST00000460289 PTX4Q96A99 478 aa18.2■□□□□ 0.5
PTPN4-208ENST00000460289 RAB3CQ96E17 227 aa18.2■□□□□ 0.5
PTPN4-208ENST00000460289 S1PR3Q99500 378 aa18.2■□□□□ 0.5
PTPN4-208ENST00000460289 ABCG5Q9H222 651 aa18.2■□□□□ 0.5
PTPN4-208ENST00000460289 PIPOXQ9P0Z9 390 aa18.2■□□□□ 0.5
PTPN4-208ENST00000460289 SLC23A1Q9UHI7 598 aa18.2■□□□□ 0.5
PTPN4-208ENST00000460289 SSR3Q9UNL2 185 aa18.2■□□□□ 0.5
PTPN4-208ENST00000460289 METTL21EPA6NDL7 271 aa18.19■□□□□ 0.5
PTPN4-208ENST00000460289 ITGB1BP1O14713 200 aa18.19■□□□□ 0.5
PTPN4-208ENST00000460289 RAB29O14966 203 aa18.19■□□□□ 0.5
PTPN4-208ENST00000460289 SLC35B1P78383 322 aa18.19■□□□□ 0.5
PTPN4-208ENST00000460289 PLA2G7Q13093 441 aa18.19■□□□□ 0.5
PTPN4-208ENST00000460289 FAM71F2Q6NXP2 309 aa18.19■□□□□ 0.5
PTPN4-208ENST00000460289 ZNF833PQ6ZTB9 187 aa18.19■□□□□ 0.5
PTPN4-208ENST00000460289 TPRA1Q86W33 373 aa18.19■□□□□ 0.5
PTPN4-208ENST00000460289 NOTCH1P46531 2555 aa18.19■□□□□ 0.5
PTPN4-208ENST00000460289 SAA2-SAA4A0A096LPE2 208 aa18.18■□□□□ 0.5
PTPN4-208ENST00000460289 A0A1W2PRX2 142 aa18.18■□□□□ 0.5
PTPN4-208ENST00000460289 HSPA12AO43301 675 aa18.18■□□□□ 0.5
PTPN4-208ENST00000460289 KCNAB3O43448 404 aa18.18■□□□□ 0.5
PTPN4-208ENST00000460289 CD3GP09693 182 aa18.18■□□□□ 0.5
PTPN4-208ENST00000460289 SAA2P0DJI9 122 aaPredicted RBP18.18■□□□□ 0.5
PTPN4-208ENST00000460289 CEACAM6P40199 344 aa18.18■□□□□ 0.5
PTPN4-208ENST00000460289 OR3A3P47888 321 aa18.18■□□□□ 0.5
PTPN4-208ENST00000460289 C10orf99Q6UWK7 81 aa18.18■□□□□ 0.5
PTPN4-208ENST00000460289 OR10R2Q8NGX6 335 aa18.18■□□□□ 0.5
PTPN4-208ENST00000460289 EDARADDQ8WWZ3 215 aa18.18■□□□□ 0.5
PTPN4-208ENST00000460289 NOL4LQ96MY1 436 aaPredicted RBP18.18■□□□□ 0.5
PTPN4-208ENST00000460289 NABP2Q9BQ15 211 aa18.18■□□□□ 0.5
PTPN4-208ENST00000460289 GON7Q9BXV9 100 aa18.18■□□□□ 0.5
PTPN4-208ENST00000460289 IFI27L2Q9H2X8 130 aa18.18■□□□□ 0.5
PTPN4-208ENST00000460289 NOTOA8MTQ0 251 aa18.17■□□□□ 0.5
PTPN4-208ENST00000460289 TRDCB7Z8K6 153 aa18.17■□□□□ 0.5
PTPN4-208ENST00000460289 AP4M1O00189 453 aa18.17■□□□□ 0.5
PTPN4-208ENST00000460289 ST8SIA5O15466 376 aa18.17■□□□□ 0.5
PTPN4-208ENST00000460289 GPR12P47775 334 aa18.17■□□□□ 0.5
PTPN4-208ENST00000460289 F2RL1P55085 397 aa18.17■□□□□ 0.5
PTPN4-208ENST00000460289 KCTD21Q4G0X4 260 aa18.17■□□□□ 0.5
PTPN4-208ENST00000460289 ZNF329Q86UD4 541 aa18.17■□□□□ 0.5
PTPN4-208ENST00000460289 COMMD1Q8N668 190 aa18.17■□□□□ 0.5
PTPN4-208ENST00000460289 MRPL20Q9BYC9 149 aaKnown RBP18.17■□□□□ 0.5
PTPN4-208ENST00000460289 SCTP09683 121 aa18.16■□□□□ 0.5
PTPN4-208ENST00000460289 PF4V1P10720 104 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms