RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 CHST1O43916 411 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 YPEL1O60688 119 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 SCGNO76038 276 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 TNFAIP8O95379 198 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 IGHV3-43DP0DP04 118 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 CD37P11049 281 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 TMEM11P17152 192 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 RAB6AP20340 208 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 ZBTB25P24278 435 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 CD24P25063 80 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 CHATP28329 748 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 FGF9P31371 208 aaPredicted RBP3.51□□□□□ -1.85
SNX1-205ENST00000559339 TALDO1P37837 337 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 GDNFP39905 211 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 VDAC2P45880 294 aaPredicted RBP3.51□□□□□ -1.85
SNX1-205ENST00000559339 VEGFCP49767 419 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 QRFPP83859 136 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 UNC119Q13432 240 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 ARL6IP1Q15041 203 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 SSX1Q16384 188 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 C2orf76Q3KRA6 126 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 KCTD21Q4G0X4 260 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 ABCA11PQ4W5N1 156 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 MORN2Q502X0 79 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 LDLRAD2Q5SZI1 272 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 HES5Q5TA89 166 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 SIGIRRQ6IA17 410 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 C22orf42Q6IC83 251 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 OR10K2Q6IF99 312 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 TREML4Q6UXN2 200 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 SLC25A48Q6ZT89 311 aaKnown RBP3.51□□□□□ -1.85
SNX1-205ENST00000559339 CENPVQ7Z7K6 275 aaPredicted RBP3.51□□□□□ -1.85
SNX1-205ENST00000559339 MOB3BQ86TA1 216 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 TGIF2LXQ8IUE1 241 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 LYG1Q8N1E2 194 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 GAPTQ8N292 157 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 Q8N2B8 174 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 FAM89BQ8N5H3 189 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 LINC00311Q8N616 119 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 DRAM1Q8N682 238 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 KLHDC1Q8N7A1 406 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 OR2AK2Q8NG84 335 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 OR10V1Q8NGI7 309 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 SETD6Q8TBK2 473 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 PTX4Q96A99 478 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 RAB3CQ96E17 227 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 KCTD7Q96MP8 289 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 RBM14Q96PK6 669 aaKnown RBP3.51□□□□□ -1.85
SNX1-205ENST00000559339 YPEL2Q96QA6 119 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 CMSS1Q9BQ75 279 aaKnown RBP3.51□□□□□ -1.85
SNX1-205ENST00000559339 NICN1Q9BSH3 213 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 FAAP24Q9BTP7 215 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 ABHD14AQ9BUJ0 271 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 GON7Q9BXV9 100 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 MMP27Q9H306 513 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 GHITMQ9H3K2 345 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 TXNL4BQ9NX01 149 aaKnown RBP3.51□□□□□ -1.85
SNX1-205ENST00000559339 NBEAL1Q6ZS30 2694 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 FBN3Q75N90 2809 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 TENM1Q9UKZ4 2725 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 IGHV1-3A0A0C4DH29 117 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 LOC100506127A0A0U1RQW1 187 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 A0A1W2PPE3 182 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 A0A1W2PPI3 338 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 NOTOA8MTQ0 251 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 SERPINE3A8MV23 424 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 RAB29O14966 203 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 SOCS1O15524 211 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 FGF16O43320 207 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 RRP9O43818 475 aaKnown RBP3.5□□□□□ -1.85
SNX1-205ENST00000559339 TMEM127O75204 238 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 FBXO24O75426 580 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 NAPSAO96009 420 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 MOSP00540 346 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 IGKV1D-33P01593 117 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 IGKV1-33P01594 117 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 OPN1MWP04001 364 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 SNRNP70P08621 437 aaKnown RBP3.5□□□□□ -1.85
SNX1-205ENST00000559339 CSF1P09603 554 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 CD3GP09693 182 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 OPN1MW2P0DN77 364 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 OPN1MW3P0DN78 364 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 CD36P16671 472 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 JUNBP17275 347 aaPredicted RBP3.5□□□□□ -1.85
SNX1-205ENST00000559339 CD1BP29016 333 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 PPP1CCP36873 323 aaKnown RBP3.5□□□□□ -1.85
SNX1-205ENST00000559339 REG1BP48304 166 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 SERPINB10P48595 397 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 EFNB2P52799 333 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 CLDN12P56749 244 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 OR10A3P58181 314 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 BLCAPP62952 87 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 SRSF4Q08170 494 aaKnown RBP3.5□□□□□ -1.85
SNX1-205ENST00000559339 ZNF816Q0VGE8 651 aaPredicted RBP3.5□□□□□ -1.85
SNX1-205ENST00000559339 KIR2DS1Q14954 304 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 NEDD8Q15843 81 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 CT45A1Q5HYN5 189 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 C9orf152Q5JTZ5 239 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 LY6G6FQ5SQ64 297 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 FOXRED2Q8IWF2 684 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms