RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 LRRC39Q96DD0 335 aa0.96□□□□□ -2.26
CCDC7-208ENST00000537047 MRAP2Q96G30 205 aa0.96□□□□□ -2.26
CCDC7-208ENST00000537047 PGLYRP3Q96LB9 341 aa0.96□□□□□ -2.26
CCDC7-208ENST00000537047 FBXL15Q9H469 300 aa0.96□□□□□ -2.26
CCDC7-208ENST00000537047 SMDT1Q9H4I9 107 aa0.96□□□□□ -2.26
CCDC7-208ENST00000537047 IFT46Q9NQC8 304 aa0.96□□□□□ -2.26
CCDC7-208ENST00000537047 NXT1Q9UKK6 140 aaKnown RBP0.96□□□□□ -2.26
CCDC7-208ENST00000537047 SCML1Q9UN30 329 aa0.96□□□□□ -2.26
CCDC7-208ENST00000537047 AMMECR1Q9Y4X0 333 aaPredicted RBP0.96□□□□□ -2.26
CCDC7-208ENST00000537047 PUS1Q9Y606 427 aaKnown RBP eCLIP0.96□□□□□ -2.26
CCDC7-208ENST00000537047 MTCH2Q9Y6C9 303 aa0.96□□□□□ -2.26
CCDC7-208ENST00000537047 RGS12O14924 1447 aa0.96□□□□□ -2.26
CCDC7-208ENST00000537047 ABCB11O95342 1321 aa0.95□□□□□ -2.26
CCDC7-208ENST00000537047 CYTH3O43739 400 aa0.95□□□□□ -2.26
CCDC7-208ENST00000537047 EPPINO95925 133 aa0.95□□□□□ -2.26
CCDC7-208ENST00000537047 CST4P01036 141 aa0.95□□□□□ -2.26
CCDC7-208ENST00000537047 APOA1P02647 267 aa0.95□□□□□ -2.26
CCDC7-208ENST00000537047 CCL2P13500 99 aa0.95□□□□□ -2.26
CCDC7-208ENST00000537047 CD200P41217 278 aa0.95□□□□□ -2.26
CCDC7-208ENST00000537047 AQP5P55064 265 aa0.95□□□□□ -2.26
CCDC7-208ENST00000537047 UBE2KP61086 200 aa0.95□□□□□ -2.26
CCDC7-208ENST00000537047 XIAPP98170 497 aa0.95□□□□□ -2.26
CCDC7-208ENST00000537047 SKP2Q13309 424 aa0.95□□□□□ -2.26
CCDC7-208ENST00000537047 ZBTB6Q15916 424 aa0.95□□□□□ -2.26
CCDC7-208ENST00000537047 FAM229BQ4G0N7 80 aa0.95□□□□□ -2.26
CCDC7-208ENST00000537047 AHSA2Q719I0 299 aa0.95□□□□□ -2.26
CCDC7-208ENST00000537047 LRRC6Q86X45 466 aa0.95□□□□□ -2.26
CCDC7-208ENST00000537047 ZBTB8OSQ8IWT0 167 aa0.95□□□□□ -2.26
CCDC7-208ENST00000537047 OR9I1Q8NGQ6 314 aa0.95□□□□□ -2.26
CCDC7-208ENST00000537047 NAP1L5Q96NT1 182 aaPredicted RBP0.95□□□□□ -2.26
CCDC7-208ENST00000537047 EBNA1BP2Q99848 306 aaKnown RBP0.95□□□□□ -2.26
CCDC7-208ENST00000537047 Q9BRP9 147 aa0.95□□□□□ -2.26
CCDC7-208ENST00000537047 HAUS4Q9H6D7 363 aa0.95□□□□□ -2.26
CCDC7-208ENST00000537047 TAS2R13Q9NYV9 303 aa0.95□□□□□ -2.26
CCDC7-208ENST00000537047 MAT2BQ9NZL9 334 aa0.95□□□□□ -2.26
CCDC7-208ENST00000537047 SNX24Q9Y343 169 aa0.95□□□□□ -2.26
CCDC7-208ENST00000537047 FIS1Q9Y3D6 152 aa0.95□□□□□ -2.26
CCDC7-208ENST00000537047 NCKAP5O14513 1909 aa0.95□□□□□ -2.26
CCDC7-208ENST00000537047 COL6A6A6NMZ7 2263 aa0.94□□□□□ -2.26
CCDC7-208ENST00000537047 IGKV1-12A0A0C4DH73 117 aa0.94□□□□□ -2.26
CCDC7-208ENST00000537047 ARRDC5A6NEK1 342 aa0.94□□□□□ -2.26
CCDC7-208ENST00000537047 B4DEV8 164 aa0.94□□□□□ -2.26
CCDC7-208ENST00000537047 C8orf87E5RJ46 101 aa0.94□□□□□ -2.26
CCDC7-208ENST00000537047 J3QQQ9 107 aa0.94□□□□□ -2.26
CCDC7-208ENST00000537047 LDOC1O95751 146 aaPredicted RBP0.94□□□□□ -2.26
CCDC7-208ENST00000537047 IGKV1D-12P01611 117 aa0.94□□□□□ -2.26
CCDC7-208ENST00000537047 S100A9P06702 114 aaKnown RBP0.94□□□□□ -2.26
CCDC7-208ENST00000537047 IGHV3-30-3P0DP02 117 aa0.94□□□□□ -2.26
CCDC7-208ENST00000537047 CTSEP14091 401 aa0.94□□□□□ -2.26
CCDC7-208ENST00000537047 NQO2P16083 231 aa0.94□□□□□ -2.26
CCDC7-208ENST00000537047 PSMA1P25786 263 aaKnown RBP0.94□□□□□ -2.26
CCDC7-208ENST00000537047 MAGEA12P43365 314 aa0.94□□□□□ -2.26
CCDC7-208ENST00000537047 GABARAPL2P60520 117 aa0.94□□□□□ -2.26
CCDC7-208ENST00000537047 RPL26P61254 145 aaKnown RBP0.94□□□□□ -2.26
CCDC7-208ENST00000537047 FLOT2Q14254 428 aa0.94□□□□□ -2.26
CCDC7-208ENST00000537047 MAPK14Q16539 360 aa0.94□□□□□ -2.26
CCDC7-208ENST00000537047 HENMT1Q5T8I9 393 aaKnown RBP0.94□□□□□ -2.26
CCDC7-208ENST00000537047 HES3Q5TGS1 186 aa0.94□□□□□ -2.26
CCDC7-208ENST00000537047 EBLN2Q6P2I7 272 aa0.94□□□□□ -2.26
CCDC7-208ENST00000537047 MTERF4Q7Z6M4 381 aaKnown RBP0.94□□□□□ -2.26
CCDC7-208ENST00000537047 OR11L1Q8NGX0 322 aa0.94□□□□□ -2.26
CCDC7-208ENST00000537047 C16orf78Q8WTQ4 265 aa0.94□□□□□ -2.26
CCDC7-208ENST00000537047 CCDC124Q96CT7 223 aaKnown RBP0.94□□□□□ -2.26
CCDC7-208ENST00000537047 MGLLQ99685 303 aa0.94□□□□□ -2.26
CCDC7-208ENST00000537047 PRRG3Q9BZD7 231 aa0.94□□□□□ -2.26
CCDC7-208ENST00000537047 OR51E2Q9H255 320 aa0.94□□□□□ -2.26
CCDC7-208ENST00000537047 XKR8Q9H6D3 395 aa0.94□□□□□ -2.26
CCDC7-208ENST00000537047 C11orf49Q9H6J7 331 aa0.94□□□□□ -2.26
CCDC7-208ENST00000537047 DMAC2Q9NW81 257 aa0.94□□□□□ -2.26
CCDC7-208ENST00000537047 COMMD9Q9P000 198 aa0.94□□□□□ -2.26
CCDC7-208ENST00000537047 RPL26L1Q9UNX3 145 aaKnown RBP0.94□□□□□ -2.26
CCDC7-208ENST00000537047 MALRD1Q5VYJ5 2156 aa0.94□□□□□ -2.26
CCDC7-208ENST00000537047 FN1P02751 2386 aaKnown RBP0.93□□□□□ -2.26
CCDC7-208ENST00000537047 COL18A1P39060 1754 aa0.93□□□□□ -2.26
CCDC7-208ENST00000537047 PTPRJQ12913 1337 aa0.93□□□□□ -2.26
CCDC7-208ENST00000537047 A0A1B0GX12 115 aa0.93□□□□□ -2.26
CCDC7-208ENST00000537047 J3QLI3 93 aa0.93□□□□□ -2.26
CCDC7-208ENST00000537047 PHYHO14832 338 aa0.93□□□□□ -2.26
CCDC7-208ENST00000537047 POLR3GO15318 223 aaPredicted RBP0.93□□□□□ -2.26
CCDC7-208ENST00000537047 SNAP29O95721 258 aa0.93□□□□□ -2.26
CCDC7-208ENST00000537047 FADS2O95864 444 aaKnown RBP0.93□□□□□ -2.26
CCDC7-208ENST00000537047 SOD1P00441 154 aa0.93□□□□□ -2.26
CCDC7-208ENST00000537047 RCVRNP35243 200 aa0.93□□□□□ -2.26
CCDC7-208ENST00000537047 ACTR1BP42025 376 aa0.93□□□□□ -2.26
CCDC7-208ENST00000537047 KCNJ3P48549 501 aa0.93□□□□□ -2.26
CCDC7-208ENST00000537047 PDK2Q15119 407 aa0.93□□□□□ -2.26
CCDC7-208ENST00000537047 FBXO48Q5FWF7 155 aa0.93□□□□□ -2.26
CCDC7-208ENST00000537047 OR5D18Q8NGL1 313 aa0.93□□□□□ -2.26
CCDC7-208ENST00000537047 OR10A6Q8NH74 314 aa0.93□□□□□ -2.26
CCDC7-208ENST00000537047 OR5K1Q8NHB7 308 aa0.93□□□□□ -2.26
CCDC7-208ENST00000537047 RORBQ92753 470 aa0.93□□□□□ -2.26
CCDC7-208ENST00000537047 PPWD1Q96BP3 646 aaKnown RBP0.93□□□□□ -2.26
CCDC7-208ENST00000537047 HBEGFQ99075 208 aa0.93□□□□□ -2.26
CCDC7-208ENST00000537047 C1QTNF6Q9BXI9 259 aa0.93□□□□□ -2.26
CCDC7-208ENST00000537047 TMEM216Q9P0N5 145 aa0.93□□□□□ -2.26
CCDC7-208ENST00000537047 ALG5Q9Y673 324 aa0.93□□□□□ -2.26
CCDC7-208ENST00000537047 IGHV3-73A0A0B4J1V6 119 aa0.92□□□□□ -2.26
CCDC7-208ENST00000537047 DHRS12A0PJE2 317 aa0.92□□□□□ -2.26
CCDC7-208ENST00000537047 UGT2B11O75310 529 aa0.92□□□□□ -2.26
CCDC7-208ENST00000537047 SLC35A2P78381 396 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms