RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 FLT4P35916 1363 aa-3.28□□□□□ -2.93
RNU6-539P-201ENST00000516665 MGAMO43451 1857 aa-3.28□□□□□ -2.94
RNU6-539P-201ENST00000516665 TRAV7A0A075B6U4 112 aa-3.29□□□□□ -2.94
RNU6-539P-201ENST00000516665 ZNF727A8MUV8 499 aa-3.29□□□□□ -2.94
RNU6-539P-201ENST00000516665 ZNF736B4DX44 427 aaPredicted RBP-3.29□□□□□ -2.94
RNU6-539P-201ENST00000516665 SCAMP2O15127 329 aaKnown RBP-3.29□□□□□ -2.94
RNU6-539P-201ENST00000516665 OR1I1O60431 355 aa-3.29□□□□□ -2.94
RNU6-539P-201ENST00000516665 CLDN11O75508 207 aa-3.29□□□□□ -2.94
RNU6-539P-201ENST00000516665 TMEM50AO95807 157 aa-3.29□□□□□ -2.94
RNU6-539P-201ENST00000516665 RALBP11234 206 aa-3.29□□□□□ -2.94
RNU6-539P-201ENST00000516665 SFNP31947 248 aa-3.29□□□□□ -2.94
RNU6-539P-201ENST00000516665 GABRA3P34903 492 aa-3.29□□□□□ -2.94
RNU6-539P-201ENST00000516665 RBP5P82980 135 aa-3.29□□□□□ -2.94
RNU6-539P-201ENST00000516665 FAM3AP98173 230 aa-3.29□□□□□ -2.94
RNU6-539P-201ENST00000516665 RIPPLY2Q5TAB7 128 aa-3.29□□□□□ -2.94
RNU6-539P-201ENST00000516665 OR2T5Q6IEZ7 315 aa-3.29□□□□□ -2.94
RNU6-539P-201ENST00000516665 TEX261Q6UWH6 196 aa-3.29□□□□□ -2.94
RNU6-539P-201ENST00000516665 RAB43Q86YS6 212 aa-3.29□□□□□ -2.94
RNU6-539P-201ENST00000516665 OR2T29Q8NH02 315 aa-3.29□□□□□ -2.94
RNU6-539P-201ENST00000516665 CLDND2Q8NHS1 167 aa-3.29□□□□□ -2.94
RNU6-539P-201ENST00000516665 SYAP1Q96A49 352 aaPredicted RBP-3.29□□□□□ -2.94
RNU6-539P-201ENST00000516665 LRRC39Q96DD0 335 aa-3.29□□□□□ -2.94
RNU6-539P-201ENST00000516665 SMIM8Q96KF7 97 aa-3.29□□□□□ -2.94
RNU6-539P-201ENST00000516665 CHID1Q9BWS9 393 aa-3.29□□□□□ -2.94
RNU6-539P-201ENST00000516665 RIBC2Q9H4K1 309 aa-3.29□□□□□ -2.94
RNU6-539P-201ENST00000516665 HRASLS2Q9NWW9 162 aa-3.29□□□□□ -2.94
RNU6-539P-201ENST00000516665 U3KQ87 197 aa-3.29□□□□□ -2.94
RNU6-539P-201ENST00000516665 PLXND1Q9Y4D7 1925 aa-3.3□□□□□ -2.94
RNU6-539P-201ENST00000516665 OR11H12B2RN74 326 aa-3.3□□□□□ -2.94
RNU6-539P-201ENST00000516665 M0R3G1 203 aa-3.3□□□□□ -2.94
RNU6-539P-201ENST00000516665 PTHP01270 115 aa-3.3□□□□□ -2.94
RNU6-539P-201ENST00000516665 PMP2P02689 132 aa-3.3□□□□□ -2.94
RNU6-539P-201ENST00000516665 CRYBA1P05813 215 aa-3.3□□□□□ -2.94
RNU6-539P-201ENST00000516665 IFNA8P32881 189 aa-3.3□□□□□ -2.94
RNU6-539P-201ENST00000516665 CD79BP40259 229 aa-3.3□□□□□ -2.94
RNU6-539P-201ENST00000516665 PSMB2P49721 201 aa-3.3□□□□□ -2.94
RNU6-539P-201ENST00000516665 LINC01554Q52M75 96 aa-3.3□□□□□ -2.94
RNU6-539P-201ENST00000516665 Q5VSD8 79 aa-3.3□□□□□ -2.94
RNU6-539P-201ENST00000516665 CLEC19AQ6UXS0 136 aa-3.3□□□□□ -2.94
RNU6-539P-201ENST00000516665 TPGS1Q6ZTW0 290 aa-3.3□□□□□ -2.94
RNU6-539P-201ENST00000516665 OR11H2Q8NH07 326 aa-3.3□□□□□ -2.94
RNU6-539P-201ENST00000516665 CTNNBL1Q8WYA6 563 aaPredicted RBP-3.3□□□□□ -2.94
RNU6-539P-201ENST00000516665 GTF2H4Q92759 462 aa-3.3□□□□□ -2.94
RNU6-539P-201ENST00000516665 TESCQ96BS2 214 aa-3.3□□□□□ -2.94
RNU6-539P-201ENST00000516665 C10orf35Q96D05 121 aa-3.3□□□□□ -2.94
RNU6-539P-201ENST00000516665 DYNLL2Q96FJ2 89 aa-3.3□□□□□ -2.94
RNU6-539P-201ENST00000516665 OLFM3Q96PB7 478 aa-3.3□□□□□ -2.94
RNU6-539P-201ENST00000516665 CENPOQ9BU64 300 aa-3.3□□□□□ -2.94
RNU6-539P-201ENST00000516665 THAP9Q9H5L6 903 aa-3.3□□□□□ -2.94
RNU6-539P-201ENST00000516665 XPNPEP1Q9NQW7 623 aa-3.3□□□□□ -2.94
RNU6-539P-201ENST00000516665 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP-3.3□□□□□ -2.94
RNU6-539P-201ENST00000516665 SNX12Q9UMY4 172 aa-3.3□□□□□ -2.94
RNU6-539P-201ENST00000516665 TNFSF18Q9UNG2 199 aa-3.3□□□□□ -2.94
RNU6-539P-201ENST00000516665 TIMM9Q9Y5J7 89 aa-3.3□□□□□ -2.94
RNU6-539P-201ENST00000516665 PEX16Q9Y5Y5 336 aa-3.3□□□□□ -2.94
RNU6-539P-201ENST00000516665 LOC730098B7Z3J9 87 aa-3.31□□□□□ -2.94
RNU6-539P-201ENST00000516665 KCNK1O00180 336 aa-3.31□□□□□ -2.94
RNU6-539P-201ENST00000516665 CHADO15335 359 aa-3.31□□□□□ -2.94
RNU6-539P-201ENST00000516665 TGFAP01135 160 aa-3.31□□□□□ -2.94
RNU6-539P-201ENST00000516665 MCF2P10911 925 aa-3.31□□□□□ -2.94
RNU6-539P-201ENST00000516665 SPRR1AP35321 89 aa-3.31□□□□□ -2.94
RNU6-539P-201ENST00000516665 EIF3EP60228 445 aaKnown RBP-3.31□□□□□ -2.94
RNU6-539P-201ENST00000516665 LAMTOR4Q0VGL1 99 aa-3.31□□□□□ -2.94
RNU6-539P-201ENST00000516665 BFSP1Q12934 665 aa-3.31□□□□□ -2.94
RNU6-539P-201ENST00000516665 PDGFRLQ15198 375 aa-3.31□□□□□ -2.94
RNU6-539P-201ENST00000516665 PSMD5Q16401 504 aa-3.31□□□□□ -2.94
RNU6-539P-201ENST00000516665 ATP6AP1LQ52LC2 224 aa-3.31□□□□□ -2.94
RNU6-539P-201ENST00000516665 HES3Q5TGS1 186 aa-3.31□□□□□ -2.94
RNU6-539P-201ENST00000516665 C10orf67Q8IYJ2 551 aa-3.31□□□□□ -2.94
RNU6-539P-201ENST00000516665 LINC00311Q8N616 119 aa-3.31□□□□□ -2.94
RNU6-539P-201ENST00000516665 ATP5SQ99766 215 aa-3.31□□□□□ -2.94
RNU6-539P-201ENST00000516665 ANAPC13Q9BS18 74 aa-3.31□□□□□ -2.94
RNU6-539P-201ENST00000516665 FAAP24Q9BTP7 215 aa-3.31□□□□□ -2.94
RNU6-539P-201ENST00000516665 FICDQ9BVA6 458 aa-3.31□□□□□ -2.94
RNU6-539P-201ENST00000516665 CHMP4AQ9BY43 222 aa-3.31□□□□□ -2.94
RNU6-539P-201ENST00000516665 HSPB8Q9UJY1 196 aa-3.31□□□□□ -2.94
RNU6-539P-201ENST00000516665 TFR2Q9UP52 801 aa-3.31□□□□□ -2.94
RNU6-539P-201ENST00000516665 AKAP9Q99996 3911 aa-3.31□□□□□ -2.94
RNU6-539P-201ENST00000516665 URB1O60287 2271 aaKnown RBP-3.32□□□□□ -2.94
RNU6-539P-201ENST00000516665 METTL21EPA6NDL7 271 aa-3.32□□□□□ -2.94
RNU6-539P-201ENST00000516665 CD300LBA8K4G0 201 aa-3.32□□□□□ -2.94
RNU6-539P-201ENST00000516665 CPLX1O14810 134 aa-3.32□□□□□ -2.94
RNU6-539P-201ENST00000516665 AGTP01019 485 aa-3.32□□□□□ -2.94
RNU6-539P-201ENST00000516665 LTAP01374 205 aa-3.32□□□□□ -2.94
RNU6-539P-201ENST00000516665 PPBPP02775 128 aa-3.32□□□□□ -2.94
RNU6-539P-201ENST00000516665 LGALS1P09382 135 aaKnown RBP-3.32□□□□□ -2.94
RNU6-539P-201ENST00000516665 HMOX1P09601 288 aa-3.32□□□□□ -2.94
RNU6-539P-201ENST00000516665 CRYBB3P26998 211 aa-3.32□□□□□ -2.94
RNU6-539P-201ENST00000516665 OR1E1P30953 314 aa-3.32□□□□□ -2.94
RNU6-539P-201ENST00000516665 CA8P35219 290 aa-3.32□□□□□ -2.94
RNU6-539P-201ENST00000516665 CA7P43166 264 aa-3.32□□□□□ -2.94
RNU6-539P-201ENST00000516665 EMP1P54849 157 aa-3.32□□□□□ -2.94
RNU6-539P-201ENST00000516665 CLDN18P56856 261 aa-3.32□□□□□ -2.94
RNU6-539P-201ENST00000516665 TPI1P60174 286 aa-3.32□□□□□ -2.94
RNU6-539P-201ENST00000516665 GPR176Q14439 515 aa-3.32□□□□□ -2.94
RNU6-539P-201ENST00000516665 KCNJ8Q15842 424 aa-3.32□□□□□ -2.94
RNU6-539P-201ENST00000516665 FAM27BQ5VT28 67 aa-3.32□□□□□ -2.94
RNU6-539P-201ENST00000516665 SLC30A8Q8IWU4 369 aa-3.32□□□□□ -2.94
RNU6-539P-201ENST00000516665 ZNF619Q8N2I2 560 aa-3.32□□□□□ -2.94
RNU6-539P-201ENST00000516665 TFGQ92734 400 aaPredicted RBP-3.32□□□□□ -2.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms