RNA–Protein interactions for RNA: ENST00000428950.2

CCDC144A-208, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5

Gene CCDC144A, Length 780 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-208ENST00000428950 PRSS27Q9BQR3 290 aa0.52□□□□□ -2.33
CCDC144A-208ENST00000428950 UPK3BQ9BT76 320 aa0.52□□□□□ -2.33
CCDC144A-208ENST00000428950 ZNF426Q9BUY5 554 aa0.52□□□□□ -2.33
CCDC144A-208ENST00000428950 PECRQ9BY49 303 aa0.52□□□□□ -2.33
CCDC144A-208ENST00000428950 POTEKPQ9BYX7 375 aa0.52□□□□□ -2.33
CCDC144A-208ENST00000428950 C11orf49Q9H6J7 331 aa0.52□□□□□ -2.33
CCDC144A-208ENST00000428950 RPL26L1Q9UNX3 145 aaKnown RBP0.52□□□□□ -2.33
CCDC144A-208ENST00000428950 TTC41PQ6P2S7 1318 aa0.52□□□□□ -2.33
CCDC144A-208ENST00000428950 TENM3Q9P273 2699 aa0.52□□□□□ -2.33
CCDC144A-208ENST00000428950 DENND4BO75064 1496 aaPredicted RBP0.52□□□□□ -2.33
CCDC144A-208ENST00000428950 KDM5BQ9UGL1 1544 aa0.52□□□□□ -2.33
CCDC144A-208ENST00000428950 IGKV2-40A0A087WW87 121 aaPredicted RBP0.51□□□□□ -2.33
CCDC144A-208ENST00000428950 B4DEV8 164 aa0.51□□□□□ -2.33
CCDC144A-208ENST00000428950 ENSAO43768 121 aaKnown RBP0.51□□□□□ -2.33
CCDC144A-208ENST00000428950 CLUHO75153 1309 aa0.51□□□□□ -2.33
CCDC144A-208ENST00000428950 LY6HO94772 140 aa0.51□□□□□ -2.33
CCDC144A-208ENST00000428950 IGKV2D-40P01614 121 aaPredicted RBP0.51□□□□□ -2.33
CCDC144A-208ENST00000428950 STAG3L2P0CL84 134 aa0.51□□□□□ -2.33
CCDC144A-208ENST00000428950 SFTPCP11686 197 aa0.51□□□□□ -2.33
CCDC144A-208ENST00000428950 CTSEP14091 401 aa0.51□□□□□ -2.33
CCDC144A-208ENST00000428950 PSMA1P25786 263 aaKnown RBP0.51□□□□□ -2.33
CCDC144A-208ENST00000428950 ATP6V0CP27449 155 aa0.51□□□□□ -2.33
CCDC144A-208ENST00000428950 ACTR1BP42025 376 aa0.51□□□□□ -2.33
CCDC144A-208ENST00000428950 GABARAPL2P60520 117 aa0.51□□□□□ -2.33
CCDC144A-208ENST00000428950 PDK2Q15119 407 aa0.51□□□□□ -2.33
CCDC144A-208ENST00000428950 TRIP13Q15645 432 aaPredicted RBP0.51□□□□□ -2.33
CCDC144A-208ENST00000428950 NKAIN1Q4KMZ8 207 aa0.51□□□□□ -2.33
CCDC144A-208ENST00000428950 PABPC1L2AQ5JQF8 200 aa0.51□□□□□ -2.33
CCDC144A-208ENST00000428950 MALRD1Q5VYJ5 2156 aa0.51□□□□□ -2.33
CCDC144A-208ENST00000428950 SSX6Q7RTT6 188 aa0.51□□□□□ -2.33
CCDC144A-208ENST00000428950 FAM19A3Q7Z5A8 133 aa0.51□□□□□ -2.33
CCDC144A-208ENST00000428950 PDCL2Q8N4E4 241 aa0.51□□□□□ -2.33
CCDC144A-208ENST00000428950 OR11H1Q8NG94 326 aa0.51□□□□□ -2.33
CCDC144A-208ENST00000428950 TIMM21Q9BVV7 248 aa0.51□□□□□ -2.33
CCDC144A-208ENST00000428950 GOLPH3Q9H4A6 298 aa0.51□□□□□ -2.33
CCDC144A-208ENST00000428950 CCDC88CQ9P219 2028 aa0.51□□□□□ -2.33
CCDC144A-208ENST00000428950 NYNRINQ9P2P1 1898 aaKnown RBP0.51□□□□□ -2.33
CCDC144A-208ENST00000428950 MRPS16Q9Y3D3 137 aaKnown RBP0.51□□□□□ -2.33
CCDC144A-208ENST00000428950 ATAD5Q96QE3 1844 aa0.5□□□□□ -2.33
CCDC144A-208ENST00000428950 MEIKINA0A087WXM9 373 aa0.5□□□□□ -2.33
CCDC144A-208ENST00000428950 VPS37CA5D8V6 355 aaPredicted RBP0.5□□□□□ -2.33
CCDC144A-208ENST00000428950 FABP7O15540 132 aa0.5□□□□□ -2.33
CCDC144A-208ENST00000428950 CRXO43186 299 aaPredicted RBP0.5□□□□□ -2.33
CCDC144A-208ENST00000428950 GNRH2O43555 120 aa0.5□□□□□ -2.33
CCDC144A-208ENST00000428950 CYTH3O43739 400 aa0.5□□□□□ -2.33
CCDC144A-208ENST00000428950 SOD1P00441 154 aa0.5□□□□□ -2.33
CCDC144A-208ENST00000428950 IGKV5-2P06315 115 aa0.5□□□□□ -2.33
CCDC144A-208ENST00000428950 ZNF705DP0CH99 300 aaPredicted RBP0.5□□□□□ -2.33
CCDC144A-208ENST00000428950 ZNF705BP0CI00 300 aaPredicted RBP0.5□□□□□ -2.33
CCDC144A-208ENST00000428950 ATF1P18846 271 aa0.5□□□□□ -2.33
CCDC144A-208ENST00000428950 PEBP1P30086 187 aaKnown RBP0.5□□□□□ -2.33
CCDC144A-208ENST00000428950 BSPH1Q075Z2 132 aa0.5□□□□□ -2.33
CCDC144A-208ENST00000428950 TRAM1Q15629 374 aa0.5□□□□□ -2.33
CCDC144A-208ENST00000428950 HSP90B2PQ58FF3 399 aa0.5□□□□□ -2.33
CCDC144A-208ENST00000428950 HENMT1Q5T8I9 393 aaKnown RBP0.5□□□□□ -2.33
CCDC144A-208ENST00000428950 HES3Q5TGS1 186 aa0.5□□□□□ -2.33
CCDC144A-208ENST00000428950 EBLN2Q6P2I7 272 aa0.5□□□□□ -2.33
CCDC144A-208ENST00000428950 RASL11AQ6T310 242 aa0.5□□□□□ -2.33
CCDC144A-208ENST00000428950 C2orf91Q6ZV80 131 aa0.5□□□□□ -2.33
CCDC144A-208ENST00000428950 GLT6D1Q7Z4J2 308 aa0.5□□□□□ -2.33
CCDC144A-208ENST00000428950 OR4A15Q8NGL6 344 aa0.5□□□□□ -2.33
CCDC144A-208ENST00000428950 FAM45AQ8TCE6 357 aa0.5□□□□□ -2.33
CCDC144A-208ENST00000428950 MITD1Q8WV92 249 aa0.5□□□□□ -2.33
CCDC144A-208ENST00000428950 XKR8Q9H6D3 395 aa0.5□□□□□ -2.33
CCDC144A-208ENST00000428950 HAUS4Q9H6D7 363 aa0.5□□□□□ -2.33
CCDC144A-208ENST00000428950 RMND1Q9NWS8 449 aa0.5□□□□□ -2.33
CCDC144A-208ENST00000428950 MYO5BQ9ULV0 1848 aa0.5□□□□□ -2.33
CCDC144A-208ENST00000428950 DISP1Q96F81 1524 aa0.49□□□□□ -2.33
CCDC144A-208ENST00000428950 IGKV3D-7A0A0C4DH55 119 aa0.49□□□□□ -2.33
CCDC144A-208ENST00000428950 IGKV3OR2-268A0A0C4DH90 116 aa0.49□□□□□ -2.33
CCDC144A-208ENST00000428950 J3QLI3 93 aa0.49□□□□□ -2.33
CCDC144A-208ENST00000428950 hCG_2039718K7EN88 272 aa0.49□□□□□ -2.33
CCDC144A-208ENST00000428950 RAP1GDS1P52306 607 aa0.49□□□□□ -2.33
CCDC144A-208ENST00000428950 ERHP84090 104 aaKnown RBP0.49□□□□□ -2.33
CCDC144A-208ENST00000428950 CD164Q04900 197 aa0.49□□□□□ -2.33
CCDC144A-208ENST00000428950 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.49□□□□□ -2.33
CCDC144A-208ENST00000428950 MTERF4Q7Z6M4 381 aaKnown RBP0.49□□□□□ -2.33
CCDC144A-208ENST00000428950 SLC35F6Q8N357 371 aa0.49□□□□□ -2.33
CCDC144A-208ENST00000428950 OR5K1Q8NHB7 308 aa0.49□□□□□ -2.33
CCDC144A-208ENST00000428950 FNDC9Q8TBE3 224 aa0.49□□□□□ -2.33
CCDC144A-208ENST00000428950 KIAA1143Q96AT1 154 aaPredicted RBP0.49□□□□□ -2.33
CCDC144A-208ENST00000428950 C11orf1Q9H5F2 150 aa0.49□□□□□ -2.33
CCDC144A-208ENST00000428950 RPRD1BQ9NQG5 326 aaKnown RBP0.49□□□□□ -2.33
CCDC144A-208ENST00000428950 C8orf4Q9NR00 106 aa0.49□□□□□ -2.33
CCDC144A-208ENST00000428950 DDX18Q9NVP1 670 aaKnown RBP0.49□□□□□ -2.33
CCDC144A-208ENST00000428950 STMN3Q9NZ72 180 aa0.49□□□□□ -2.33
CCDC144A-208ENST00000428950 TMEM216Q9P0N5 145 aa0.49□□□□□ -2.33
CCDC144A-208ENST00000428950 FAM215AQ9Y5M1 114 aa0.49□□□□□ -2.33
CCDC144A-208ENST00000428950 FN1P02751 2386 aaKnown RBP0.48□□□□□ -2.33
CCDC144A-208ENST00000428950 TNIKQ9UKE5 1360 aa0.48□□□□□ -2.33
CCDC144A-208ENST00000428950 COL6A6A6NMZ7 2263 aa0.48□□□□□ -2.33
CCDC144A-208ENST00000428950 SDK1Q7Z5N4 2213 aa0.48□□□□□ -2.33
CCDC144A-208ENST00000428950 ZNF532Q9HCE3 1301 aa0.48□□□□□ -2.33
CCDC144A-208ENST00000428950 CDIPTO14735 213 aa0.48□□□□□ -2.33
CCDC144A-208ENST00000428950 SC5DO75845 299 aa0.48□□□□□ -2.33
CCDC144A-208ENST00000428950 OTCP00480 354 aa0.48□□□□□ -2.33
CCDC144A-208ENST00000428950 UCHL1P09936 223 aa0.48□□□□□ -2.33
CCDC144A-208ENST00000428950 PRB4P10163 310 aaPredicted RBP0.48□□□□□ -2.33
CCDC144A-208ENST00000428950 PPP1CCP36873 323 aaKnown RBP0.48□□□□□ -2.33
CCDC144A-208ENST00000428950 TSPEAR-AS2P59090 65 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms