RNA–Protein interactions for RNA: ENST00000428950.2

CCDC144A-208, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5

Gene CCDC144A, Length 780 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-208ENST00000428950 AEBP2Q6ZN18 517 aaPredicted RBP20.61■□□□□ 0.89
CCDC144A-208ENST00000428950 CHIC1Q5VXU3 224 aa19.38■□□□□ 0.69
CCDC144A-208ENST00000428950 SENP3Q9H4L4 574 aaPredicted RBP17.73■□□□□ 0.43
CCDC144A-208ENST00000428950 PHF23Q9BUL5 403 aaPredicted RBP17.36■□□□□ 0.37
CCDC144A-208ENST00000428950 POTEDQ86YR6 584 aa17.15■□□□□ 0.34
CCDC144A-208ENST00000428950 FOXD1Q16676 465 aa16.64■□□□□ 0.25
CCDC144A-208ENST00000428950 MSH5O43196 834 aa15.94■□□□□ 0.14
CCDC144A-208ENST00000428950 PLPPR3Q6T4P5 718 aa15.65■□□□□ 0.1
CCDC144A-208ENST00000428950 PIAS4Q8N2W9 510 aaPredicted RBP15.33■□□□□ 0.04
CCDC144A-208ENST00000428950 PPP6R1Q9UPN7 881 aa15.07■□□□□ 0
CCDC144A-208ENST00000428950 ADRA2BP18089 450 aa15.04■□□□□ -0
CCDC144A-208ENST00000428950 CACNB1Q02641 598 aaPredicted RBP14.26□□□□□ -0.13
CCDC144A-208ENST00000428950 DMRT2Q9Y5R5 561 aa13.91□□□□□ -0.18
CCDC144A-208ENST00000428950 MAPK8IP2Q13387 824 aaPredicted RBP13.82□□□□□ -0.2
CCDC144A-208ENST00000428950 SCAF1Q9H7N4 1312 aaKnown RBP13.78□□□□□ -0.2
CCDC144A-208ENST00000428950 PPP4R3CPQ6ZMV5 832 aa13.75□□□□□ -0.21
CCDC144A-208ENST00000428950 RNF39Q9H2S5 420 aa13.52□□□□□ -0.25
CCDC144A-208ENST00000428950 CNKSR2Q8WXI2 1034 aa13.42□□□□□ -0.26
CCDC144A-208ENST00000428950 DCAF8L1A6NGE4 600 aa13.41□□□□□ -0.26
CCDC144A-208ENST00000428950 NCBP3Q53F19 620 aaKnown RBP13.34□□□□□ -0.27
CCDC144A-208ENST00000428950 C1QBPQ07021 282 aaKnown RBP13.26□□□□□ -0.29
CCDC144A-208ENST00000428950 POTEHQ6S545 545 aa13.26□□□□□ -0.29
CCDC144A-208ENST00000428950 HOXD11P31277 338 aaPredicted RBP13.22□□□□□ -0.29
CCDC144A-208ENST00000428950 RNF216Q9NWF9 866 aaPredicted RBP13.22□□□□□ -0.29
CCDC144A-208ENST00000428950 KCNA4P22459 653 aa13.19□□□□□ -0.3
CCDC144A-208ENST00000428950 NPM3O75607 178 aaKnown RBP13.14□□□□□ -0.31
CCDC144A-208ENST00000428950 DNAJC5BQ9UF47 199 aa12.81□□□□□ -0.36
CCDC144A-208ENST00000428950 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.59□□□□□ -0.39
CCDC144A-208ENST00000428950 SLC4A1APQ9BWU0 796 aaKnown RBP12.53□□□□□ -0.4
CCDC144A-208ENST00000428950 SLC4A2P04920 1241 aa12.46□□□□□ -0.41
CCDC144A-208ENST00000428950 U3KPZ7 1027 aaPredicted RBP12.38□□□□□ -0.43
CCDC144A-208ENST00000428950 DSG3P32926 999 aa12.33□□□□□ -0.44
CCDC144A-208ENST00000428950 FOXD4L1Q9NU39 408 aa12.22□□□□□ -0.45
CCDC144A-208ENST00000428950 CAPN15O75808 1086 aa12.19□□□□□ -0.46
CCDC144A-208ENST00000428950 SPINK5Q9NQ38 1064 aaPredicted RBP12.17□□□□□ -0.46
CCDC144A-208ENST00000428950 MYCNP04198 464 aaPredicted RBP12.16□□□□□ -0.46
CCDC144A-208ENST00000428950 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.15□□□□□ -0.46
CCDC144A-208ENST00000428950 HNRNPUL2Q1KMD3 747 aaKnown RBP12.15□□□□□ -0.46
CCDC144A-208ENST00000428950 ZBTB22O15209 634 aa12.14□□□□□ -0.47
CCDC144A-208ENST00000428950 SAMD1Q6SPF0 538 aaPredicted RBP12.09□□□□□ -0.47
CCDC144A-208ENST00000428950 APLP2Q06481 763 aa12.08□□□□□ -0.48
CCDC144A-208ENST00000428950 SP7Q8TDD2 431 aaPredicted RBP11.99□□□□□ -0.49
CCDC144A-208ENST00000428950 ZNF219Q9P2Y4 722 aaPredicted RBP11.94□□□□□ -0.5
CCDC144A-208ENST00000428950 TRHP20396 242 aaPredicted RBP11.93□□□□□ -0.5
CCDC144A-208ENST00000428950 CHRDL2Q6WN34 429 aa11.92□□□□□ -0.5
CCDC144A-208ENST00000428950 EHMT2Q96KQ7 1210 aa11.92□□□□□ -0.5
CCDC144A-208ENST00000428950 CSRNP3Q8WYN3 585 aa11.88□□□□□ -0.51
CCDC144A-208ENST00000428950 ABCB7O75027 752 aa11.82□□□□□ -0.52
CCDC144A-208ENST00000428950 ATF5Q9Y2D1 282 aaPredicted RBP11.82□□□□□ -0.52
CCDC144A-208ENST00000428950 ATXN8OSP0DMR3 200 aa11.81□□□□□ -0.52
CCDC144A-208ENST00000428950 RBM42Q9BTD8 480 aaKnown RBP11.79□□□□□ -0.52
CCDC144A-208ENST00000428950 POLA2Q14181 598 aa11.68□□□□□ -0.54
CCDC144A-208ENST00000428950 ZBTB12Q9Y330 459 aaPredicted RBP11.51□□□□□ -0.57
CCDC144A-208ENST00000428950 HAX1O00165 279 aa11.48□□□□□ -0.57
CCDC144A-208ENST00000428950 PIP4P2Q8N4L2 257 aa11.44□□□□□ -0.58
CCDC144A-208ENST00000428950 FBLN2P98095 1184 aa11.36□□□□□ -0.59
CCDC144A-208ENST00000428950 OSCARQ8IYS5 282 aa11.32□□□□□ -0.6
CCDC144A-208ENST00000428950 AKT1S1Q96B36 256 aa11.32□□□□□ -0.6
CCDC144A-208ENST00000428950 PLSCR2Q9NRY7 297 aa11.32□□□□□ -0.6
CCDC144A-208ENST00000428950 MKRN4PQ13434 485 aaPredicted RBP11.31□□□□□ -0.6
CCDC144A-208ENST00000428950 EVX2Q03828 476 aa11.26□□□□□ -0.61
CCDC144A-208ENST00000428950 LHX8Q68G74 356 aa11.23□□□□□ -0.61
CCDC144A-208ENST00000428950 REM2Q8IYK8 340 aaPredicted RBP11.23□□□□□ -0.61
CCDC144A-208ENST00000428950 FXR2P51116 673 aaKnown RBP eCLIP11.2□□□□□ -0.62
CCDC144A-208ENST00000428950 SPDYE2BA6NHP3 402 aa11.18□□□□□ -0.62
CCDC144A-208ENST00000428950 SPDYE6P0CI01 402 aa11.18□□□□□ -0.62
CCDC144A-208ENST00000428950 SPDYE2Q495Y8 402 aa11.18□□□□□ -0.62
CCDC144A-208ENST00000428950 PITPNM1O00562 1244 aa11.12□□□□□ -0.63
CCDC144A-208ENST00000428950 ZNF692Q9BU19 519 aaPredicted RBP11.07□□□□□ -0.64
CCDC144A-208ENST00000428950 SSUH2Q9Y2M2 353 aa11.07□□□□□ -0.64
CCDC144A-208ENST00000428950 SPDYE4A6NLX3 237 aa10.95□□□□□ -0.66
CCDC144A-208ENST00000428950 GABBR2O75899 941 aa10.95□□□□□ -0.66
CCDC144A-208ENST00000428950 PABPN1Q86U42 306 aaKnown RBP eCLIP10.93□□□□□ -0.66
CCDC144A-208ENST00000428950 SPDYE1Q8NFV5 336 aaPredicted RBP10.89□□□□□ -0.67
CCDC144A-208ENST00000428950 C19orf67A6NJJ6 358 aa10.88□□□□□ -0.67
CCDC144A-208ENST00000428950 CLEC11AQ9Y240 323 aa10.83□□□□□ -0.68
CCDC144A-208ENST00000428950 PRKAR2AP13861 404 aaKnown RBP10.82□□□□□ -0.68
CCDC144A-208ENST00000428950 FKBP8Q14318 412 aa10.76□□□□□ -0.69
CCDC144A-208ENST00000428950 PROM2Q8N271 834 aa10.76□□□□□ -0.69
CCDC144A-208ENST00000428950 PRR29P0C7W0 189 aa10.71□□□□□ -0.69
CCDC144A-208ENST00000428950 POTEIP0CG38 1075 aa10.71□□□□□ -0.69
CCDC144A-208ENST00000428950 STAG3Q9UJ98 1225 aa10.71□□□□□ -0.69
CCDC144A-208ENST00000428950 POTEMA6NI47 508 aa10.63□□□□□ -0.71
CCDC144A-208ENST00000428950 CHADLQ6NUI6 762 aa10.59□□□□□ -0.71
CCDC144A-208ENST00000428950 POTEGQ6S5H5 508 aa10.57□□□□□ -0.72
CCDC144A-208ENST00000428950 CREBZFQ9NS37 354 aa10.54□□□□□ -0.72
CCDC144A-208ENST00000428950 OTUD5Q96G74 571 aa10.5□□□□□ -0.73
CCDC144A-208ENST00000428950 PCDH10Q9P2E7 1040 aa10.5□□□□□ -0.73
CCDC144A-208ENST00000428950 FARP1Q9Y4F1 1045 aaPredicted RBP10.48□□□□□ -0.73
CCDC144A-208ENST00000428950 DCBLD2Q96PD2 775 aa10.47□□□□□ -0.73
CCDC144A-208ENST00000428950 CLCN6P51797 869 aa10.45□□□□□ -0.74
CCDC144A-208ENST00000428950 FBXO3Q9UK99 471 aa10.44□□□□□ -0.74
CCDC144A-208ENST00000428950 CD44P16070 742 aaKnown RBP10.42□□□□□ -0.74
CCDC144A-208ENST00000428950 MNX1P50219 401 aaPredicted RBP10.39□□□□□ -0.75
CCDC144A-208ENST00000428950 MIER1Q8N108 512 aa10.39□□□□□ -0.75
CCDC144A-208ENST00000428950 PLEKHG5O94827 1062 aa10.37□□□□□ -0.75
CCDC144A-208ENST00000428950 PLCD3Q8N3E9 789 aa10.37□□□□□ -0.75
CCDC144A-208ENST00000428950 NPM1P06748 294 aaKnown RBP eCLIP10.35□□□□□ -0.75
CCDC144A-208ENST00000428950 POTEB2H3BUK9 544 aa10.34□□□□□ -0.75
CCDC144A-208ENST00000428950 VASPP50552 380 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms