RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 IL18BPO95998 194 aa11.93□□□□□ -0.5
ATP2C1-201ENST00000328560 COX5BP10606 129 aa11.93□□□□□ -0.5
ATP2C1-201ENST00000328560 ALKBH6Q3KRA9 238 aa11.93□□□□□ -0.5
ATP2C1-201ENST00000328560 SPANXN5Q5MJ07 72 aa11.93□□□□□ -0.5
ATP2C1-201ENST00000328560 NCMAPQ5T1S8 102 aa11.93□□□□□ -0.5
ATP2C1-201ENST00000328560 Q6ZS49 121 aa11.93□□□□□ -0.5
ATP2C1-201ENST00000328560 ZNF429Q86V71 674 aa11.93□□□□□ -0.5
ATP2C1-201ENST00000328560 MPC1Q9Y5U8 109 aa11.93□□□□□ -0.5
ATP2C1-201ENST00000328560 GTF3C1Q12789 2109 aa11.93□□□□□ -0.5
ATP2C1-201ENST00000328560 EP300Q09472 2414 aaPredicted RBP11.93□□□□□ -0.5
ATP2C1-201ENST00000328560 OR5B21A6NL26 309 aa11.93□□□□□ -0.5
ATP2C1-201ENST00000328560 FOLR2P14207 255 aa11.93□□□□□ -0.5
ATP2C1-201ENST00000328560 NIT2Q9NQR4 276 aa11.93□□□□□ -0.5
ATP2C1-201ENST00000328560 C5orf52A6NGY3 159 aa11.92□□□□□ -0.5
ATP2C1-201ENST00000328560 RAB2AP61019 212 aa11.92□□□□□ -0.5
ATP2C1-201ENST00000328560 RPS16P62249 146 aaKnown RBP11.92□□□□□ -0.5
ATP2C1-201ENST00000328560 TLE4Q04727 773 aa11.92□□□□□ -0.5
ATP2C1-201ENST00000328560 MRPL49Q13405 166 aaKnown RBP11.92□□□□□ -0.5
ATP2C1-201ENST00000328560 H1FOOQ8IZA3 346 aaPredicted RBP11.92□□□□□ -0.5
ATP2C1-201ENST00000328560 TMEM178AQ8NBL3 297 aa11.92□□□□□ -0.5
ATP2C1-201ENST00000328560 EGLN1Q9GZT9 426 aa11.92□□□□□ -0.5
ATP2C1-201ENST00000328560 LYZL6O75951 148 aa11.92□□□□□ -0.5
ATP2C1-201ENST00000328560 OR2H2O95918 312 aa11.92□□□□□ -0.5
ATP2C1-201ENST00000328560 ELLP55199 621 aaPredicted RBP11.92□□□□□ -0.5
ATP2C1-201ENST00000328560 UBE2NP61088 152 aaKnown RBP11.92□□□□□ -0.5
ATP2C1-201ENST00000328560 RAB11AP62491 216 aa11.92□□□□□ -0.5
ATP2C1-201ENST00000328560 PMP22Q01453 160 aa11.92□□□□□ -0.5
ATP2C1-201ENST00000328560 RNF212Q495C1 297 aa11.92□□□□□ -0.5
ATP2C1-201ENST00000328560 ALKBH2Q6NS38 261 aa11.92□□□□□ -0.5
ATP2C1-201ENST00000328560 PSENENQ9NZ42 101 aa11.92□□□□□ -0.5
ATP2C1-201ENST00000328560 KIAA1456Q9P272 454 aa11.92□□□□□ -0.5
ATP2C1-201ENST00000328560 RNF115Q9Y4L5 304 aa11.92□□□□□ -0.5
ATP2C1-201ENST00000328560 TRGV5A0A0B4J1U4 118 aa11.92□□□□□ -0.5
ATP2C1-201ENST00000328560 SRP19P09132 144 aaKnown RBP11.92□□□□□ -0.5
ATP2C1-201ENST00000328560 CEACAM6P40199 344 aa11.92□□□□□ -0.5
ATP2C1-201ENST00000328560 DLK1P80370 383 aa11.92□□□□□ -0.5
ATP2C1-201ENST00000328560 BAXQ07812 192 aa11.92□□□□□ -0.5
ATP2C1-201ENST00000328560 IL24Q13007 206 aa11.92□□□□□ -0.5
ATP2C1-201ENST00000328560 OR8G2PQ6IF36 304 aa11.92□□□□□ -0.5
ATP2C1-201ENST00000328560 FAM53AQ6NSI3 398 aaPredicted RBP11.92□□□□□ -0.5
ATP2C1-201ENST00000328560 ZNF808Q8N4W9 903 aaPredicted RBP11.92□□□□□ -0.5
ATP2C1-201ENST00000328560 IFT22Q9H7X7 185 aa11.92□□□□□ -0.5
ATP2C1-201ENST00000328560 RP1L1Q8IWN7 2480 aaPredicted RBP11.92□□□□□ -0.5
ATP2C1-201ENST00000328560 PRSS44E7EML9 344 aa11.91□□□□□ -0.5
ATP2C1-201ENST00000328560 SCAF4O95104 1147 aaKnown RBP11.91□□□□□ -0.5
ATP2C1-201ENST00000328560 TFF1P04155 84 aa11.91□□□□□ -0.5
ATP2C1-201ENST00000328560 AGAP20933 346 aa11.91□□□□□ -0.5
ATP2C1-201ENST00000328560 TAS2R30P59541 319 aa11.91□□□□□ -0.5
ATP2C1-201ENST00000328560 OR51I2Q9H344 312 aa11.91□□□□□ -0.5
ATP2C1-201ENST00000328560 VSIRQ9H7M9 311 aa11.91□□□□□ -0.5
ATP2C1-201ENST00000328560 CDH20Q9HBT6 801 aa11.91□□□□□ -0.5
ATP2C1-201ENST00000328560 J3QT63 122 aa11.91□□□□□ -0.5
ATP2C1-201ENST00000328560 CDX4O14627 284 aaPredicted RBP11.91□□□□□ -0.5
ATP2C1-201ENST00000328560 TGFBR3Q03167 851 aa11.91□□□□□ -0.5
ATP2C1-201ENST00000328560 ICAM4Q14773 271 aa11.91□□□□□ -0.5
ATP2C1-201ENST00000328560 ZNF674Q2M3X9 581 aa11.91□□□□□ -0.5
ATP2C1-201ENST00000328560 FBXW9Q5XUX1 488 aa11.91□□□□□ -0.5
ATP2C1-201ENST00000328560 SCCPDHQ8NBX0 429 aa11.91□□□□□ -0.5
ATP2C1-201ENST00000328560 NIPSNAP3BQ9BS92 247 aa11.91□□□□□ -0.5
ATP2C1-201ENST00000328560 RTL8AQ9BWD3 113 aa11.91□□□□□ -0.5
ATP2C1-201ENST00000328560 UNKLQ9H9P5 680 aaKnown RBP11.91□□□□□ -0.5
ATP2C1-201ENST00000328560 DUXBA0A1W2PPF3 345 aa11.91□□□□□ -0.5
ATP2C1-201ENST00000328560 SYNGR2O43760 224 aa11.91□□□□□ -0.5
ATP2C1-201ENST00000328560 DFFBO76075 338 aa11.91□□□□□ -0.5
ATP2C1-201ENST00000328560 PLA2G5P39877 138 aa11.91□□□□□ -0.5
ATP2C1-201ENST00000328560 TBC1D28Q2M2D7 210 aa11.91□□□□□ -0.5
ATP2C1-201ENST00000328560 ZNF766Q5HY98 468 aa11.91□□□□□ -0.5
ATP2C1-201ENST00000328560 POM121Q96HA1 1249 aa11.91□□□□□ -0.5
ATP2C1-201ENST00000328560 ZNF665Q9H7R5 613 aa11.91□□□□□ -0.5
ATP2C1-201ENST00000328560 RPRMQ9NS64 109 aa11.91□□□□□ -0.5
ATP2C1-201ENST00000328560 CACNA1HO95180 2353 aa11.9□□□□□ -0.5
ATP2C1-201ENST00000328560 HMGB3O15347 200 aaKnown RBP11.9□□□□□ -0.5
ATP2C1-201ENST00000328560 IGKV1-39P01597 117 aa11.9□□□□□ -0.5
ATP2C1-201ENST00000328560 IGKV1D-39P04432 117 aa11.9□□□□□ -0.5
ATP2C1-201ENST00000328560 KIAA0141Q14154 515 aaPredicted RBP11.9□□□□□ -0.5
ATP2C1-201ENST00000328560 RNFT1Q5M7Z0 435 aa11.9□□□□□ -0.5
ATP2C1-201ENST00000328560 WDR86Q86TI4 376 aa11.9□□□□□ -0.5
ATP2C1-201ENST00000328560 SPRY4Q9C004 299 aa11.9□□□□□ -0.5
ATP2C1-201ENST00000328560 TUBA4BQ9H853 241 aa11.9□□□□□ -0.5
ATP2C1-201ENST00000328560 A0A1B0GU03 582 aa11.9□□□□□ -0.5
ATP2C1-201ENST00000328560 IFNA17P01571 189 aa11.9□□□□□ -0.5
ATP2C1-201ENST00000328560 HOXC12P31275 282 aa11.9□□□□□ -0.5
ATP2C1-201ENST00000328560 CCL11P51671 97 aa11.9□□□□□ -0.5
ATP2C1-201ENST00000328560 ARL16Q0P5N6 197 aa11.9□□□□□ -0.5
ATP2C1-201ENST00000328560 TRIP6Q15654 476 aaKnown RBP11.9□□□□□ -0.5
ATP2C1-201ENST00000328560 SRSF7Q16629 238 aaKnown RBP eCLIP11.9□□□□□ -0.5
ATP2C1-201ENST00000328560 ZNF826PQ6ZT77 177 aa11.9□□□□□ -0.5
ATP2C1-201ENST00000328560 BCL2L2Q92843 193 aaPredicted RBP11.9□□□□□ -0.5
ATP2C1-201ENST00000328560 OBP2BQ9NPH6 170 aa11.9□□□□□ -0.5
ATP2C1-201ENST00000328560 DOCK11Q5JSL3 2073 aa11.9□□□□□ -0.5
ATP2C1-201ENST00000328560 RBMXL2O75526 392 aaKnown RBP11.9□□□□□ -0.51
ATP2C1-201ENST00000328560 KRASP01116 189 aa11.9□□□□□ -0.51
ATP2C1-201ENST00000328560 LMO1P25800 156 aa11.9□□□□□ -0.51
ATP2C1-201ENST00000328560 PAX6P26367 422 aa11.9□□□□□ -0.51
ATP2C1-201ENST00000328560 PPP1CBP62140 327 aa11.9□□□□□ -0.51
ATP2C1-201ENST00000328560 TESK1Q15569 626 aa11.9□□□□□ -0.51
ATP2C1-201ENST00000328560 SNIP1Q8TAD8 396 aaKnown RBP11.9□□□□□ -0.51
ATP2C1-201ENST00000328560 RAB40CQ96S21 281 aa11.9□□□□□ -0.51
ATP2C1-201ENST00000328560 OPA3Q9H6K4 179 aa11.9□□□□□ -0.51
ATP2C1-201ENST00000328560 TINAGQ9UJW2 476 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms