RNA–Protein interactions for RNA: ENST00000517041.1

RNU1-117P-201, Transcript of RNA, U1 small nuclear 117, pseudogene, humanhuman

BASIC

Gene RNU1-117P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-117P-201ENST00000517041 SELENOHQ8IZQ5 122 aaKnown RBP0.57□□□□□ -2.32
RNU1-117P-201ENST00000517041 TRIML2Q8N7C3 387 aa0.57□□□□□ -2.32
RNU1-117P-201ENST00000517041 GATD1Q8NB37 220 aa0.57□□□□□ -2.32
RNU1-117P-201ENST00000517041 OR9I1Q8NGQ6 314 aa0.57□□□□□ -2.32
RNU1-117P-201ENST00000517041 OR5K1Q8NHB7 308 aa0.57□□□□□ -2.32
RNU1-117P-201ENST00000517041 PDCD6IPQ8WUM4 868 aaKnown RBP0.57□□□□□ -2.32
RNU1-117P-201ENST00000517041 MRPS24Q96EL2 167 aaKnown RBP0.57□□□□□ -2.32
RNU1-117P-201ENST00000517041 HBEGFQ99075 208 aa0.57□□□□□ -2.32
RNU1-117P-201ENST00000517041 UPK3BQ9BT76 320 aa0.57□□□□□ -2.32
RNU1-117P-201ENST00000517041 C11orf49Q9H6J7 331 aa0.57□□□□□ -2.32
RNU1-117P-201ENST00000517041 PRO2289Q9P1D8 64 aa0.57□□□□□ -2.32
RNU1-117P-201ENST00000517041 PUS1Q9Y606 427 aaKnown RBP eCLIP0.57□□□□□ -2.32
RNU1-117P-201ENST00000517041 ALG5Q9Y673 324 aa0.57□□□□□ -2.32
RNU1-117P-201ENST00000517041 COL4A2P08572 1712 aa0.57□□□□□ -2.32
RNU1-117P-201ENST00000517041 USP42Q9H9J4 1324 aaKnown RBP0.57□□□□□ -2.32
RNU1-117P-201ENST00000517041 COL18A1P39060 1754 aa0.56□□□□□ -2.32
RNU1-117P-201ENST00000517041 IGHV3-73A0A0B4J1V6 119 aa0.56□□□□□ -2.32
RNU1-117P-201ENST00000517041 F8W036 122 aa0.56□□□□□ -2.32
RNU1-117P-201ENST00000517041 hCG_2039718K7EN88 272 aa0.56□□□□□ -2.32
RNU1-117P-201ENST00000517041 TRAPPC3O43617 180 aa0.56□□□□□ -2.32
RNU1-117P-201ENST00000517041 CYTH3O43739 400 aa0.56□□□□□ -2.32
RNU1-117P-201ENST00000517041 SC5DO75845 299 aa0.56□□□□□ -2.32
RNU1-117P-201ENST00000517041 SPNP16150 400 aa0.56□□□□□ -2.32
RNU1-117P-201ENST00000517041 ZNF3P17036 446 aa0.56□□□□□ -2.32
RNU1-117P-201ENST00000517041 ATF1P18846 271 aa0.56□□□□□ -2.32
RNU1-117P-201ENST00000517041 CCNOP22674 350 aa0.56□□□□□ -2.32
RNU1-117P-201ENST00000517041 S100A2P29034 98 aa0.56□□□□□ -2.32
RNU1-117P-201ENST00000517041 EMP2P54851 167 aa0.56□□□□□ -2.32
RNU1-117P-201ENST00000517041 RAB2AP61019 212 aa0.56□□□□□ -2.32
RNU1-117P-201ENST00000517041 TRAM1Q15629 374 aa0.56□□□□□ -2.32
RNU1-117P-201ENST00000517041 ZBTB6Q15916 424 aa0.56□□□□□ -2.32
RNU1-117P-201ENST00000517041 MAPK14Q16539 360 aa0.56□□□□□ -2.32
RNU1-117P-201ENST00000517041 HENMT1Q5T8I9 393 aaKnown RBP0.56□□□□□ -2.32
RNU1-117P-201ENST00000517041 PDCL2Q8N4E4 241 aa0.56□□□□□ -2.32
RNU1-117P-201ENST00000517041 ZNF321PQ8N8H1 164 aa0.56□□□□□ -2.32
RNU1-117P-201ENST00000517041 ASCC1Q8N9N2 400 aaKnown RBP0.56□□□□□ -2.32
RNU1-117P-201ENST00000517041 C16orf78Q8WTQ4 265 aa0.56□□□□□ -2.32
RNU1-117P-201ENST00000517041 RNF133Q8WVZ7 376 aa0.56□□□□□ -2.32
RNU1-117P-201ENST00000517041 ZNF396Q96N95 335 aaPredicted RBP0.56□□□□□ -2.32
RNU1-117P-201ENST00000517041 NAA38Q9BRA0 125 aaKnown RBP0.56□□□□□ -2.32
RNU1-117P-201ENST00000517041 UBQLN4Q9NRR5 601 aa0.56□□□□□ -2.32
RNU1-117P-201ENST00000517041 TMEM216Q9P0N5 145 aa0.56□□□□□ -2.32
RNU1-117P-201ENST00000517041 DOK5Q9P104 306 aa0.56□□□□□ -2.32
RNU1-117P-201ENST00000517041 PLXNA3P51805 1871 aa0.56□□□□□ -2.32
RNU1-117P-201ENST00000517041 TNIKQ9UKE5 1360 aa0.56□□□□□ -2.32
RNU1-117P-201ENST00000517041 NUP205Q92621 2012 aa0.55□□□□□ -2.32
RNU1-117P-201ENST00000517041 STRCP1A6NGW2 1772 aa0.55□□□□□ -2.32
RNU1-117P-201ENST00000517041 DOCK10Q96BY6 2186 aa0.55□□□□□ -2.32
RNU1-117P-201ENST00000517041 TMEM131Q92545 1883 aa0.55□□□□□ -2.32
RNU1-117P-201ENST00000517041 IGKV1-12A0A0C4DH73 117 aa0.55□□□□□ -2.32
RNU1-117P-201ENST00000517041 PHYHO14832 338 aa0.55□□□□□ -2.32
RNU1-117P-201ENST00000517041 SHOX2O60902 331 aaPredicted RBP0.55□□□□□ -2.32
RNU1-117P-201ENST00000517041 UGT2B11O75310 529 aa0.55□□□□□ -2.32
RNU1-117P-201ENST00000517041 EPPINO95925 133 aa0.55□□□□□ -2.32
RNU1-117P-201ENST00000517041 IGKV1D-12P01611 117 aa0.55□□□□□ -2.32
RNU1-117P-201ENST00000517041 CRYGDP07320 174 aa0.55□□□□□ -2.32
RNU1-117P-201ENST00000517041 ATP6V0CP27449 155 aa0.55□□□□□ -2.32
RNU1-117P-201ENST00000517041 SLC35A2P78381 396 aa0.55□□□□□ -2.32
RNU1-117P-201ENST00000517041 GTF2BQ00403 316 aa0.55□□□□□ -2.32
RNU1-117P-201ENST00000517041 PSG3Q16557 428 aa0.55□□□□□ -2.32
RNU1-117P-201ENST00000517041 BSXQ3C1V8 233 aa0.55□□□□□ -2.32
RNU1-117P-201ENST00000517041 MRPL51Q4U2R6 128 aaKnown RBP0.55□□□□□ -2.32
RNU1-117P-201ENST00000517041 HES3Q5TGS1 186 aa0.55□□□□□ -2.32
RNU1-117P-201ENST00000517041 Q6ZTI0 123 aa0.55□□□□□ -2.32
RNU1-117P-201ENST00000517041 FAM19A3Q7Z5A8 133 aa0.55□□□□□ -2.32
RNU1-117P-201ENST00000517041 ZNF283Q8N7M2 679 aa0.55□□□□□ -2.32
RNU1-117P-201ENST00000517041 OR2Y1Q8NGV0 311 aa0.55□□□□□ -2.32
RNU1-117P-201ENST00000517041 OR51H1Q8NH63 302 aa0.55□□□□□ -2.32
RNU1-117P-201ENST00000517041 TMEM239Q8WW34 195 aa0.55□□□□□ -2.32
RNU1-117P-201ENST00000517041 KIAA1143Q96AT1 154 aaPredicted RBP0.55□□□□□ -2.32
RNU1-117P-201ENST00000517041 ZNF625Q96I27 306 aaPredicted RBP0.55□□□□□ -2.32
RNU1-117P-201ENST00000517041 EBNA1BP2Q99848 306 aaKnown RBP0.55□□□□□ -2.32
RNU1-117P-201ENST00000517041 BCL7BQ9BQE9 202 aa0.55□□□□□ -2.32
RNU1-117P-201ENST00000517041 ZNF426Q9BUY5 554 aa0.55□□□□□ -2.32
RNU1-117P-201ENST00000517041 UGT2B28Q9BY64 529 aa0.55□□□□□ -2.32
RNU1-117P-201ENST00000517041 RABL2AQ9UBK7 228 aaPredicted RBP0.55□□□□□ -2.32
RNU1-117P-201ENST00000517041 FAM215AQ9Y5M1 114 aa0.55□□□□□ -2.32
RNU1-117P-201ENST00000517041 ADAMTS7Q9UKP4 1686 aa0.55□□□□□ -2.32
RNU1-117P-201ENST00000517041 RP1L1Q8IWN7 2480 aaPredicted RBP0.55□□□□□ -2.32
RNU1-117P-201ENST00000517041 TRGV2A0A075B6R0 118 aa0.54□□□□□ -2.32
RNU1-117P-201ENST00000517041 IGHV3-15A0A0B4J1V0 119 aa0.54□□□□□ -2.32
RNU1-117P-201ENST00000517041 A0A0G2JQZ4 141 aa0.54□□□□□ -2.32
RNU1-117P-201ENST00000517041 ARRDC5A6NEK1 342 aa0.54□□□□□ -2.32
RNU1-117P-201ENST00000517041 UBFD1O14562 309 aaKnown RBP0.54□□□□□ -2.32
RNU1-117P-201ENST00000517041 LY6HO94772 140 aa0.54□□□□□ -2.32
RNU1-117P-201ENST00000517041 IGKV5-2P06315 115 aa0.54□□□□□ -2.32
RNU1-117P-201ENST00000517041 NQO2P16083 231 aa0.54□□□□□ -2.32
RNU1-117P-201ENST00000517041 SLC25A16P16260 332 aa0.54□□□□□ -2.32
RNU1-117P-201ENST00000517041 PTNP21246 168 aa0.54□□□□□ -2.32
RNU1-117P-201ENST00000517041 OPRM1P35372 400 aa0.54□□□□□ -2.32
RNU1-117P-201ENST00000517041 CD200P41217 278 aa0.54□□□□□ -2.32
RNU1-117P-201ENST00000517041 OR2B6P58173 313 aa0.54□□□□□ -2.32
RNU1-117P-201ENST00000517041 GABARAPL2P60520 117 aa0.54□□□□□ -2.32
RNU1-117P-201ENST00000517041 TSPAN31Q12999 210 aa0.54□□□□□ -2.32
RNU1-117P-201ENST00000517041 SKP2Q13309 424 aa0.54□□□□□ -2.32
RNU1-117P-201ENST00000517041 PDK2Q15119 407 aa0.54□□□□□ -2.32
RNU1-117P-201ENST00000517041 EXOC3L4Q17RC7 722 aa0.54□□□□□ -2.32
RNU1-117P-201ENST00000517041 C18orf21Q32NC0 220 aaPredicted RBP0.54□□□□□ -2.32
RNU1-117P-201ENST00000517041 PABPC1L2AQ5JQF8 200 aa0.54□□□□□ -2.32
RNU1-117P-201ENST00000517041 TIMM23BQ5SRD1 257 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms