RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 PPIL3Q9H2H8 161 aaKnown RBP7.36□□□□□ -1.23
SMC1A-203ENST00000428014 ZNF580Q9UK33 172 aa7.36□□□□□ -1.23
SMC1A-203ENST00000428014 JPT1Q9UK76 154 aa7.36□□□□□ -1.23
SMC1A-203ENST00000428014 AIPO00170 330 aa7.35□□□□□ -1.23
SMC1A-203ENST00000428014 LDLRAD4O15165 306 aa7.35□□□□□ -1.23
SMC1A-203ENST00000428014 FGF16O43320 207 aa7.35□□□□□ -1.23
SMC1A-203ENST00000428014 CRTAPO75718 401 aaPredicted RBP7.35□□□□□ -1.23
SMC1A-203ENST00000428014 MMP23AO75900 390 aa7.35□□□□□ -1.23
SMC1A-203ENST00000428014 SCGNO76038 276 aa7.35□□□□□ -1.23
SMC1A-203ENST00000428014 RGS11O94810 467 aa7.35□□□□□ -1.23
SMC1A-203ENST00000428014 OR2F2O95006 317 aa7.35□□□□□ -1.23
SMC1A-203ENST00000428014 ARSBP15848 533 aa7.35□□□□□ -1.23
SMC1A-203ENST00000428014 RAB6AP20340 208 aa7.35□□□□□ -1.23
SMC1A-203ENST00000428014 MDKP21741 143 aaPredicted RBP7.35□□□□□ -1.23
SMC1A-203ENST00000428014 COX7A1P24310 79 aa7.35□□□□□ -1.23
SMC1A-203ENST00000428014 IL3RAP26951 378 aa7.35□□□□□ -1.23
SMC1A-203ENST00000428014 CHATP28329 748 aa7.35□□□□□ -1.23
SMC1A-203ENST00000428014 SCN1BQ07699 218 aa7.35□□□□□ -1.23
SMC1A-203ENST00000428014 P2RY14Q15391 338 aa7.35□□□□□ -1.23
SMC1A-203ENST00000428014 SSX2Q16385 188 aa7.35□□□□□ -1.23
SMC1A-203ENST00000428014 LDLRAD2Q5SZI1 272 aa7.35□□□□□ -1.23
SMC1A-203ENST00000428014 TPTE2P1Q5T6R2 138 aa7.35□□□□□ -1.23
SMC1A-203ENST00000428014 SYT6Q5T7P8 510 aaPredicted RBP7.35□□□□□ -1.23
SMC1A-203ENST00000428014 SIGIRRQ6IA17 410 aa7.35□□□□□ -1.23
SMC1A-203ENST00000428014 ZNF880Q6PDB4 577 aa7.35□□□□□ -1.23
SMC1A-203ENST00000428014 ZNF773Q6PK81 442 aa7.35□□□□□ -1.23
SMC1A-203ENST00000428014 SLC25A48Q6ZT89 311 aaKnown RBP7.35□□□□□ -1.23
SMC1A-203ENST00000428014 LHFPL4Q7Z7J7 247 aa7.35□□□□□ -1.23
SMC1A-203ENST00000428014 PDZD9Q8IXQ8 264 aa7.35□□□□□ -1.23
SMC1A-203ENST00000428014 SPARTQ8N0X7 666 aa7.35□□□□□ -1.23
SMC1A-203ENST00000428014 BATF2Q8N1L9 274 aa7.35□□□□□ -1.23
SMC1A-203ENST00000428014 TMEM104Q8NE00 496 aa7.35□□□□□ -1.23
SMC1A-203ENST00000428014 OR10K1Q8NGX5 313 aa7.35□□□□□ -1.23
SMC1A-203ENST00000428014 NDNFQ8TB73 568 aa7.35□□□□□ -1.23
SMC1A-203ENST00000428014 WIPF2Q8TF74 440 aaPredicted RBP7.35□□□□□ -1.23
SMC1A-203ENST00000428014 ST6GALNAC6Q969X2 333 aa7.35□□□□□ -1.23
SMC1A-203ENST00000428014 DUX5Q96PT3 197 aa7.35□□□□□ -1.23
SMC1A-203ENST00000428014 NEDD4LQ96PU5 975 aa7.35□□□□□ -1.23
SMC1A-203ENST00000428014 NR1H4Q96RI1 486 aaPredicted RBP7.35□□□□□ -1.23
SMC1A-203ENST00000428014 SELENOIQ9C0D9 397 aa7.35□□□□□ -1.23
SMC1A-203ENST00000428014 PRSS22Q9GZN4 317 aa7.35□□□□□ -1.23
SMC1A-203ENST00000428014 CCDC90BQ9GZT6 254 aa7.35□□□□□ -1.23
SMC1A-203ENST00000428014 TOLLIPQ9H0E2 274 aa7.35□□□□□ -1.23
SMC1A-203ENST00000428014 ZNF286AQ9HBT8 521 aa7.35□□□□□ -1.23
SMC1A-203ENST00000428014 GFOD1Q9NXC2 390 aa7.35□□□□□ -1.23
SMC1A-203ENST00000428014 ETAA1Q9NY74 926 aa7.35□□□□□ -1.23
SMC1A-203ENST00000428014 PSG11Q9UQ72 335 aa7.35□□□□□ -1.23
SMC1A-203ENST00000428014 PEX16Q9Y5Y5 336 aa7.35□□□□□ -1.23
SMC1A-203ENST00000428014 V9GY05 133 aa7.35□□□□□ -1.23
SMC1A-203ENST00000428014 PNMA8CA0A1B0GUJ8 204 aa7.34□□□□□ -1.23
SMC1A-203ENST00000428014 FOXI3A8MTJ6 420 aaPredicted RBP7.34□□□□□ -1.23
SMC1A-203ENST00000428014 M0QZ24 198 aa7.34□□□□□ -1.23
SMC1A-203ENST00000428014 YPEL1O60688 119 aa7.34□□□□□ -1.23
SMC1A-203ENST00000428014 GAPDHP04406 335 aaKnown RBP7.34□□□□□ -1.23
SMC1A-203ENST00000428014 FAM106CPP0CH98 169 aa7.34□□□□□ -1.23
SMC1A-203ENST00000428014 HSMCR30P0CW71 290 aa7.34□□□□□ -1.23
SMC1A-203ENST00000428014 JUNBP17275 347 aaPredicted RBP7.34□□□□□ -1.23
SMC1A-203ENST00000428014 SNU13P55769 128 aaKnown RBP7.34□□□□□ -1.23
SMC1A-203ENST00000428014 FABP5Q01469 135 aa7.34□□□□□ -1.23
SMC1A-203ENST00000428014 DYNC1I2Q13409 638 aaKnown RBP7.34□□□□□ -1.23
SMC1A-203ENST00000428014 SSX1Q16384 188 aa7.34□□□□□ -1.23
SMC1A-203ENST00000428014 TIMM50Q3ZCQ8 353 aa7.34□□□□□ -1.23
SMC1A-203ENST00000428014 ATAD3CQ5T2N8 411 aa7.34□□□□□ -1.23
SMC1A-203ENST00000428014 PRAMEF5Q5TYX0 476 aa7.34□□□□□ -1.23
SMC1A-203ENST00000428014 IZUMO1Q8IYV9 350 aa7.34□□□□□ -1.23
SMC1A-203ENST00000428014 OR56B1Q8NGI3 324 aa7.34□□□□□ -1.23
SMC1A-203ENST00000428014 C17orf50Q8WW18 174 aa7.34□□□□□ -1.23
SMC1A-203ENST00000428014 SGCDQ92629 289 aa7.34□□□□□ -1.23
SMC1A-203ENST00000428014 ARL11Q969Q4 196 aa7.34□□□□□ -1.23
SMC1A-203ENST00000428014 RPEQ96AT9 228 aa7.34□□□□□ -1.23
SMC1A-203ENST00000428014 ORAI1Q96D31 301 aa7.34□□□□□ -1.23
SMC1A-203ENST00000428014 RBM14Q96PK6 669 aaKnown RBP7.34□□□□□ -1.23
SMC1A-203ENST00000428014 YPEL2Q96QA6 119 aa7.34□□□□□ -1.23
SMC1A-203ENST00000428014 CHCHD6Q9BRQ6 235 aa7.34□□□□□ -1.23
SMC1A-203ENST00000428014 WNT10AQ9GZT5 417 aa7.34□□□□□ -1.23
SMC1A-203ENST00000428014 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.34□□□□□ -1.23
SMC1A-203ENST00000428014 KCNIP1Q9NZI2 227 aa7.34□□□□□ -1.23
SMC1A-203ENST00000428014 STEAP1Q9UHE8 339 aa7.34□□□□□ -1.23
SMC1A-203ENST00000428014 RAB22AQ9UL26 194 aa7.34□□□□□ -1.23
SMC1A-203ENST00000428014 A0A1W2PP11 408 aa7.33□□□□□ -1.24
SMC1A-203ENST00000428014 A0A1W2PPI3 338 aa7.33□□□□□ -1.24
SMC1A-203ENST00000428014 A0A1W2PPK0 400 aa7.33□□□□□ -1.24
SMC1A-203ENST00000428014 IFITM5A6NNB3 132 aa7.33□□□□□ -1.24
SMC1A-203ENST00000428014 SERPINE3A8MV23 424 aa7.33□□□□□ -1.24
SMC1A-203ENST00000428014 C12orf77C9JDV5 145 aa7.33□□□□□ -1.24
SMC1A-203ENST00000428014 EREGO14944 169 aa7.33□□□□□ -1.24
SMC1A-203ENST00000428014 LANCL1O43813 399 aa7.33□□□□□ -1.24
SMC1A-203ENST00000428014 TNFAIP8O95379 198 aa7.33□□□□□ -1.24
SMC1A-203ENST00000428014 CALCBP10092 127 aa7.33□□□□□ -1.24
SMC1A-203ENST00000428014 MYL9P24844 172 aa7.33□□□□□ -1.24
SMC1A-203ENST00000428014 CALRP27797 417 aaKnown RBP7.33□□□□□ -1.24
SMC1A-203ENST00000428014 CD1BP29016 333 aa7.33□□□□□ -1.24
SMC1A-203ENST00000428014 SLC6A1P30531 599 aa7.33□□□□□ -1.24
SMC1A-203ENST00000428014 SSTR5P35346 364 aa7.33□□□□□ -1.24
SMC1A-203ENST00000428014 DLX1P56177 255 aa7.33□□□□□ -1.24
SMC1A-203ENST00000428014 RPS25P62851 125 aaKnown RBP7.33□□□□□ -1.24
SMC1A-203ENST00000428014 UNC119Q13432 240 aa7.33□□□□□ -1.24
SMC1A-203ENST00000428014 HERPUD1Q15011 391 aa7.33□□□□□ -1.24
SMC1A-203ENST00000428014 HMGN3Q15651 99 aa7.33□□□□□ -1.24
SMC1A-203ENST00000428014 RAB11BQ15907 218 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms