RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 IFT22Q9H7X7 185 aa9.59□□□□□ -0.87
HLA-DQB3-203ENST00000425319 TMEM138Q9NPI0 162 aa9.59□□□□□ -0.87
HLA-DQB3-203ENST00000425319 CKLFQ9UBR5 152 aa9.59□□□□□ -0.87
HLA-DQB3-203ENST00000425319 LRRC42Q9Y546 428 aa9.59□□□□□ -0.87
HLA-DQB3-203ENST00000425319 RGS11O94810 467 aa9.58□□□□□ -0.88
HLA-DQB3-203ENST00000425319 ZNF93P35789 620 aaPredicted RBP9.58□□□□□ -0.88
HLA-DQB3-203ENST00000425319 POLR2IP36954 125 aaKnown RBP9.58□□□□□ -0.88
HLA-DQB3-203ENST00000425319 SNRPGP62308 76 aaKnown RBP9.58□□□□□ -0.88
HLA-DQB3-203ENST00000425319 RUNX1Q01196 453 aa9.58□□□□□ -0.88
HLA-DQB3-203ENST00000425319 PIGYQ3MUY2 71 aa9.58□□□□□ -0.88
HLA-DQB3-203ENST00000425319 NHLRC3Q5JS37 347 aa9.58□□□□□ -0.88
HLA-DQB3-203ENST00000425319 LIN54Q6MZP7 749 aa9.58□□□□□ -0.88
HLA-DQB3-203ENST00000425319 SLC25A48Q6ZT89 311 aaKnown RBP9.58□□□□□ -0.88
HLA-DQB3-203ENST00000425319 Q8N6K4 173 aa9.58□□□□□ -0.88
HLA-DQB3-203ENST00000425319 ZNF491Q8N8L2 437 aa9.58□□□□□ -0.88
HLA-DQB3-203ENST00000425319 OR10K1Q8NGX5 313 aa9.58□□□□□ -0.88
HLA-DQB3-203ENST00000425319 OR10AC1Q8NH08 325 aa9.58□□□□□ -0.88
HLA-DQB3-203ENST00000425319 ISOC1Q96CN7 298 aa9.58□□□□□ -0.88
HLA-DQB3-203ENST00000425319 EXOGQ9Y2C4 368 aaKnown RBP9.58□□□□□ -0.88
HLA-DQB3-203ENST00000425319 IGHV3-43A0A0B4J1X8 118 aa9.57□□□□□ -0.88
HLA-DQB3-203ENST00000425319 TRAV39A0A0B4J263 110 aa9.57□□□□□ -0.88
HLA-DQB3-203ENST00000425319 TRAV41A0A0B4J266 112 aa9.57□□□□□ -0.88
HLA-DQB3-203ENST00000425319 LINC01619G3V211 115 aa9.57□□□□□ -0.88
HLA-DQB3-203ENST00000425319 GABRPO00591 440 aa9.57□□□□□ -0.88
HLA-DQB3-203ENST00000425319 LDLRAD4O15165 306 aa9.57□□□□□ -0.88
HLA-DQB3-203ENST00000425319 CA11O75493 328 aa9.57□□□□□ -0.88
HLA-DQB3-203ENST00000425319 CIB2O75838 187 aa9.57□□□□□ -0.88
HLA-DQB3-203ENST00000425319 ATP5HO75947 161 aa9.57□□□□□ -0.88
HLA-DQB3-203ENST00000425319 IFNA6P05013 189 aa9.57□□□□□ -0.88
HLA-DQB3-203ENST00000425319 OR8U9P0C7N5 309 aa9.57□□□□□ -0.88
HLA-DQB3-203ENST00000425319 IGHV3-43DP0DP04 118 aa9.57□□□□□ -0.88
HLA-DQB3-203ENST00000425319 SERPINA2P20848 420 aa9.57□□□□□ -0.88
HLA-DQB3-203ENST00000425319 RAB9AP51151 201 aa9.57□□□□□ -0.88
HLA-DQB3-203ENST00000425319 RBM11P57052 281 aaKnown RBP9.57□□□□□ -0.88
HLA-DQB3-203ENST00000425319 PITPNAQ00169 270 aa9.57□□□□□ -0.88
HLA-DQB3-203ENST00000425319 MED21Q13503 144 aa9.57□□□□□ -0.88
HLA-DQB3-203ENST00000425319 FHL3Q13643 280 aa9.57□□□□□ -0.88
HLA-DQB3-203ENST00000425319 ASCL4Q6XD76 172 aa9.57□□□□□ -0.88
HLA-DQB3-203ENST00000425319 TMPRSS11AQ6ZMR5 421 aa9.57□□□□□ -0.88
HLA-DQB3-203ENST00000425319 SBSPONQ8IVN8 264 aa9.57□□□□□ -0.88
HLA-DQB3-203ENST00000425319 SGPP2Q8IWX5 399 aa9.57□□□□□ -0.88
HLA-DQB3-203ENST00000425319 C10orf67Q8IYJ2 551 aa9.57□□□□□ -0.88
HLA-DQB3-203ENST00000425319 PRR18Q8N4B5 295 aa9.57□□□□□ -0.88
HLA-DQB3-203ENST00000425319 IL17DQ8TAD2 202 aa9.57□□□□□ -0.88
HLA-DQB3-203ENST00000425319 DCUN1D4Q92564 292 aa9.57□□□□□ -0.88
HLA-DQB3-203ENST00000425319 RNF166Q96A37 237 aaPredicted RBP9.57□□□□□ -0.88
HLA-DQB3-203ENST00000425319 MRPS24Q96EL2 167 aaKnown RBP9.57□□□□□ -0.88
HLA-DQB3-203ENST00000425319 ISYNA1Q9NPH2 558 aa9.57□□□□□ -0.88
HLA-DQB3-203ENST00000425319 OR2S2Q9NQN1 319 aa9.57□□□□□ -0.88
HLA-DQB3-203ENST00000425319 PARP11Q9NR21 331 aa9.57□□□□□ -0.88
HLA-DQB3-203ENST00000425319 PLSCR3Q9NRY6 295 aa9.57□□□□□ -0.88
HLA-DQB3-203ENST00000425319 IL36GQ9NZH8 169 aa9.57□□□□□ -0.88
HLA-DQB3-203ENST00000425319 OAZ3Q9UMX2 235 aa9.57□□□□□ -0.88
HLA-DQB3-203ENST00000425319 WSB1Q9Y6I7 421 aa9.57□□□□□ -0.88
HLA-DQB3-203ENST00000425319 LANCL1O43813 399 aa9.56□□□□□ -0.88
HLA-DQB3-203ENST00000425319 CDRT1O95170 752 aa9.56□□□□□ -0.88
HLA-DQB3-203ENST00000425319 MT-ND4P03905 459 aa9.56□□□□□ -0.88
HLA-DQB3-203ENST00000425319 SLC2A2P11168 524 aaPredicted RBP9.56□□□□□ -0.88
HLA-DQB3-203ENST00000425319 GP9P14770 177 aa9.56□□□□□ -0.88
HLA-DQB3-203ENST00000425319 MYF6P23409 242 aa9.56□□□□□ -0.88
HLA-DQB3-203ENST00000425319 BDKRB2P30411 391 aa9.56□□□□□ -0.88
HLA-DQB3-203ENST00000425319 SOX2P48431 317 aa9.56□□□□□ -0.88
HLA-DQB3-203ENST00000425319 F2RL1P55085 397 aa9.56□□□□□ -0.88
HLA-DQB3-203ENST00000425319 RAB40BQ12829 278 aa9.56□□□□□ -0.88
HLA-DQB3-203ENST00000425319 PLGLAQ15195 96 aa9.56□□□□□ -0.88
HLA-DQB3-203ENST00000425319 CCDC58Q4VC31 144 aa9.56□□□□□ -0.88
HLA-DQB3-203ENST00000425319 UTF1Q5T230 341 aa9.56□□□□□ -0.88
HLA-DQB3-203ENST00000425319 SYT6Q5T7P8 510 aaPredicted RBP9.56□□□□□ -0.88
HLA-DQB3-203ENST00000425319 DDI2Q5TDH0 399 aa9.56□□□□□ -0.88
HLA-DQB3-203ENST00000425319 PYHIN1Q6K0P9 492 aa9.56□□□□□ -0.88
HLA-DQB3-203ENST00000425319 RPL22L1Q6P5R6 122 aaKnown RBP9.56□□□□□ -0.88
HLA-DQB3-203ENST00000425319 OVCH2Q7RTZ1 564 aa9.56□□□□□ -0.88
HLA-DQB3-203ENST00000425319 FAM71E2Q8N5Q1 922 aa9.56□□□□□ -0.88
HLA-DQB3-203ENST00000425319 TCTEX1D1Q8N7M0 179 aa9.56□□□□□ -0.88
HLA-DQB3-203ENST00000425319 ABHD5Q8WTS1 349 aa9.56□□□□□ -0.88
HLA-DQB3-203ENST00000425319 ST6GALNAC6Q969X2 333 aa9.56□□□□□ -0.88
HLA-DQB3-203ENST00000425319 OR5B12Q96R08 314 aa9.56□□□□□ -0.88
HLA-DQB3-203ENST00000425319 CITED4Q96RK1 184 aa9.56□□□□□ -0.88
HLA-DQB3-203ENST00000425319 ETAA1Q9NY74 926 aa9.56□□□□□ -0.88
HLA-DQB3-203ENST00000425319 RPL36Q9Y3U8 105 aaKnown RBP9.56□□□□□ -0.88
HLA-DQB3-203ENST00000425319 GMPPBQ9Y5P6 360 aa9.56□□□□□ -0.88
HLA-DQB3-203ENST00000425319 I3L521 148 aa9.55□□□□□ -0.88
HLA-DQB3-203ENST00000425319 J3QRE1 110 aa9.55□□□□□ -0.88
HLA-DQB3-203ENST00000425319 GEMIN2O14893 280 aaKnown RBP9.55□□□□□ -0.88
HLA-DQB3-203ENST00000425319 FRMD6-AS1P0C7T7 363 aa9.55□□□□□ -0.88
HLA-DQB3-203ENST00000425319 CFHR3Q02985 330 aa9.55□□□□□ -0.88
HLA-DQB3-203ENST00000425319 TATDN3Q17R31 274 aa9.55□□□□□ -0.88
HLA-DQB3-203ENST00000425319 ZNF497Q6ZNH5 498 aa9.55□□□□□ -0.88
HLA-DQB3-203ENST00000425319 ANKRD13BQ86YJ7 626 aa9.55□□□□□ -0.88
HLA-DQB3-203ENST00000425319 TMEM104Q8NE00 496 aa9.55□□□□□ -0.88
HLA-DQB3-203ENST00000425319 TMEM106AQ96A25 262 aa9.55□□□□□ -0.88
HLA-DQB3-203ENST00000425319 PDCD1LG2Q9BQ51 273 aa9.55□□□□□ -0.88
HLA-DQB3-203ENST00000425319 HSPB9Q9BQS6 159 aa9.55□□□□□ -0.88
HLA-DQB3-203ENST00000425319 TAS2R4Q9NYW5 299 aa9.55□□□□□ -0.88
HLA-DQB3-203ENST00000425319 LCE6AA0A183 80 aa9.54□□□□□ -0.88
HLA-DQB3-203ENST00000425319 IRGMA1A4Y4 181 aa9.54□□□□□ -0.88
HLA-DQB3-203ENST00000425319 SAC3D1A6NKF1 404 aa9.54□□□□□ -0.88
HLA-DQB3-203ENST00000425319 C15orf65H3BRN8 121 aa9.54□□□□□ -0.88
HLA-DQB3-203ENST00000425319 DYNC1I1O14576 645 aa9.54□□□□□ -0.88
HLA-DQB3-203ENST00000425319 NBR2O15453 112 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms