RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Nmnat3Q99JR6 245 aa8.45□□□□□ -1.06
Col6a5-201ENSMUST00000165165 GpnmbQ99P91 574 aa8.45□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Dusp6Q9DBB1 381 aa8.45□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Aurkaip1Q9DCJ7 200 aa8.45□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Aloxe3Q9WV07 711 aa8.45□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Nwd2Q6P5U7 1742 aa8.45□□□□□ -1.06
Col6a5-201ENSMUST00000165165 RictorQ6QI06 1708 aa8.45□□□□□ -1.06
Col6a5-201ENSMUST00000165165 D3Ertd254eA0A0G2JEM5 796 aa8.45□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Trav23A0A0G2JG17 115 aa8.45□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Vmn1r224E9PWK2 298 aa8.45□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Igsf6P0C6B7 237 aa8.45□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Gm10840Q3V2K9 103 aa8.45□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Gramd2bQ6PEM6 445 aa8.45□□□□□ -1.06
Col6a5-201ENSMUST00000165165 FevQ8QZW2 237 aa8.45□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Pcolce2Q8R4W6 414 aa8.45□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Psat1Q99K85 370 aa8.45□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Ufc1Q9CR09 167 aa8.45□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Senp8Q9D2Z4 221 aa8.45□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Znf346Q9R0B7 294 aa8.45□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Gm45861A0A1B0GRY3 1923 aa8.45□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Dock6Q8VDR9 2080 aa8.45□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Isoc2aP85094 206 aa8.45□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Ascl1Q02067 231 aa8.45□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Defa26Q3L180 93 aa8.45□□□□□ -1.06
Col6a5-201ENSMUST00000165165 C1qtnf6Q6IR41 264 aa8.45□□□□□ -1.06
Col6a5-201ENSMUST00000165165 H2-M10.5Q85ZW7 330 aa8.45□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Sirt4Q8R216 333 aa8.45□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Vmn1r234Q8R298 329 aa8.45□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Isyna1Q9JHU9 557 aa8.45□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Cpn1Q9JJN5 457 aa8.45□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Myo16Q5DU14 1919 aa8.45□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Med1Q925J9 1575 aa8.45□□□□□ -1.06
Col6a5-201ENSMUST00000165165 TectbO08524 329 aa8.45□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Igk-V19-17P01633 149 aa8.45□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Col19a1Q0VF58 1136 aa8.45□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Tas2r39Q7TQA5 319 aa8.45□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Fbxw26Q8BI58 466 aa8.45□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Jag1Q9QXX0 1218 aa8.45□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Mfap5Q9QZJ6 164 aa8.45□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Alpk3Q924C5 1678 aa8.45□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Defa2P28309 93 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Gsx1P31315 261 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Spata6Q3U6K5 488 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Klri2Q5DT36 248 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Fzd8Q61091 685 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 SheQ8BSD5 492 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Gucd1Q8BZI6 239 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 SdhaQ8K2B3 664 aaKnown RBP8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Rbmxl2Q9DAE2 385 aaKnown RBP8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Calhm1D3Z291 348 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 MgllO35678 303 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 MgpP19788 104 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Tnfsf8P32972 239 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 IfnkQ7TSL0 199 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Fbll1Q80WS3 314 aaKnown RBP8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Olfr1020Q8VFK7 317 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Sval1Q9D2X6 151 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Jam3Q9D8B7 310 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Hapln1Q9QUP5 356 aaKnown RBP8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 St6galnac4Q9R2B6 360 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 F13bQ07968 669 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Grxcr2Q3TYR5 254 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Spata22Q5SV06 358 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Gm10334Q792Y8 246 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Aqp11Q8BHH1 271 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Olfr803Q8VFI3 308 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Tmem123Q91Z22 195 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Mrpl54Q9CPW3 135 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Vmn1r47Q9EQ51 310 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Abca3Q8R420 1704 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Nrxn3Q6P9K9 1571 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Olfr485A0A140LJF5 317 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Slc25a34A2ADF7 318 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 ZxdbA2CE44 873 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Mtatp6P00848 226 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Rab24P35290 203 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Dph3Q8K0W9 82 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Wfikkn1Q8R0S6 552 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Ntmt1Q8R2U4 223 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Nit1Q8VDK1 323 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Znf281Q99LI5 893 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Isl2Q9CXV0 359 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Ascl3Q9JJR7 174 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Fam90a1aA2A4E2 429 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 EdaO54693 391 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Irs1P35569 1233 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Hoxd1Q01822 328 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 NotoQ5TIS6 240 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Metap1Q8BP48 386 aaKnown RBP8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Stbd1Q8C7E7 338 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Dync2li1Q8K0T2 351 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Lin28aQ8K3Y3 209 aaKnown RBP8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Tm4sf5Q91XF2 196 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Glrx2Q923X4 156 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Tm7sf3Q9CRG1 565 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Aifm1Q9Z0X1 612 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Trbc2A0A075B5J4 173 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Trbc1A0A0A6YWV4 173 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Il17dA0A0B4J1G4 205 aa8.44□□□□□ -1.06
Col6a5-201ENSMUST00000165165 Olfr548-ps1A0A1B0GSG0 314 aa8.44□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 64 ms