RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 RELBQ01201 579 aa13.54□□□□□ -0.24
UBE3D-208ENST00000626828 LDLRAD2Q5SZI1 272 aa13.54□□□□□ -0.24
UBE3D-208ENST00000626828 DHRS7BQ6IAN0 325 aaPredicted RBP13.54□□□□□ -0.24
UBE3D-208ENST00000626828 ZNF773Q6PK81 442 aa13.54□□□□□ -0.24
UBE3D-208ENST00000626828 CD200R1LQ6Q8B3 271 aa13.54□□□□□ -0.24
UBE3D-208ENST00000626828 BAIAP2L2Q6UXY1 529 aa13.54□□□□□ -0.24
UBE3D-208ENST00000626828 DYNAPQ8N1N2 210 aa13.54□□□□□ -0.24
UBE3D-208ENST00000626828 OR9G1Q8NH87 305 aa13.54□□□□□ -0.24
UBE3D-208ENST00000626828 PIFOQ8TCI5 191 aa13.54□□□□□ -0.24
UBE3D-208ENST00000626828 FAM46BQ96A09 425 aa13.54□□□□□ -0.24
UBE3D-208ENST00000626828 NEDD4LQ96PU5 975 aa13.54□□□□□ -0.24
UBE3D-208ENST00000626828 RAB18Q9NP72 206 aa13.54□□□□□ -0.24
UBE3D-208ENST00000626828 ETAA1Q9NY74 926 aa13.54□□□□□ -0.24
UBE3D-208ENST00000626828 HILPDAQ9Y5L2 63 aa13.54□□□□□ -0.24
UBE3D-208ENST00000626828 V9GY05 133 aa13.54□□□□□ -0.24
UBE3D-208ENST00000626828 TRAV1-2A0A0B4J238 106 aa13.53□□□□□ -0.24
UBE3D-208ENST00000626828 TRAV39A0A0B4J263 110 aa13.53□□□□□ -0.24
UBE3D-208ENST00000626828 CLPSL1A2RUU4 121 aa13.53□□□□□ -0.24
UBE3D-208ENST00000626828 PDCD5O14737 125 aa13.53□□□□□ -0.24
UBE3D-208ENST00000626828 PDCD6O75340 191 aa13.53□□□□□ -0.24
UBE3D-208ENST00000626828 ARSBP15848 533 aa13.53□□□□□ -0.24
UBE3D-208ENST00000626828 MDKP21741 143 aaPredicted RBP13.53□□□□□ -0.24
UBE3D-208ENST00000626828 CEACAM3P40198 252 aa13.53□□□□□ -0.24
UBE3D-208ENST00000626828 DYNLT3P51808 116 aa13.53□□□□□ -0.24
UBE3D-208ENST00000626828 RPS27AP62979 156 aaKnown RBP13.53□□□□□ -0.24
UBE3D-208ENST00000626828 LY6EQ16553 131 aa13.53□□□□□ -0.24
UBE3D-208ENST00000626828 SIGIRRQ6IA17 410 aa13.53□□□□□ -0.24
UBE3D-208ENST00000626828 OR10K2Q6IF99 312 aa13.53□□□□□ -0.24
UBE3D-208ENST00000626828 LIAT1Q6ZQX7 453 aa13.53□□□□□ -0.24
UBE3D-208ENST00000626828 DTX3Q8N9I9 347 aa13.53□□□□□ -0.24
UBE3D-208ENST00000626828 OR4P4Q8NGL7 312 aa13.53□□□□□ -0.24
UBE3D-208ENST00000626828 CCDC107Q8WV48 283 aa13.53□□□□□ -0.24
UBE3D-208ENST00000626828 ARL11Q969Q4 196 aa13.53□□□□□ -0.24
UBE3D-208ENST00000626828 GFI1Q99684 422 aa13.53□□□□□ -0.24
UBE3D-208ENST00000626828 TMEM59Q9BXS4 323 aa13.53□□□□□ -0.24
UBE3D-208ENST00000626828 ZNF286AQ9HBT8 521 aa13.53□□□□□ -0.24
UBE3D-208ENST00000626828 RAB9BQ9NP90 201 aa13.53□□□□□ -0.24
UBE3D-208ENST00000626828 TRAPPC2LQ9UL33 140 aa13.53□□□□□ -0.24
UBE3D-208ENST00000626828 UBE2QL1A1L167 161 aa13.52□□□□□ -0.25
UBE3D-208ENST00000626828 TMEM14DPA8MWL7 114 aa13.52□□□□□ -0.25
UBE3D-208ENST00000626828 BUB1B-PAK6H3BSN5 160 aa13.52□□□□□ -0.25
UBE3D-208ENST00000626828 AIPO00170 330 aa13.52□□□□□ -0.25
UBE3D-208ENST00000626828 TSPAN9O75954 239 aa13.52□□□□□ -0.25
UBE3D-208ENST00000626828 PSMB9P28065 219 aa13.52□□□□□ -0.25
UBE3D-208ENST00000626828 RAB13P51153 203 aa13.52□□□□□ -0.25
UBE3D-208ENST00000626828 QRFPP83859 136 aa13.52□□□□□ -0.25
UBE3D-208ENST00000626828 RAB11BQ15907 218 aa13.52□□□□□ -0.25
UBE3D-208ENST00000626828 SYT6Q5T7P8 510 aaPredicted RBP13.52□□□□□ -0.25
UBE3D-208ENST00000626828 OLFML2AQ68BL7 652 aa13.52□□□□□ -0.25
UBE3D-208ENST00000626828 SHISA2Q6UWI4 295 aa13.52□□□□□ -0.25
UBE3D-208ENST00000626828 OR2W3Q7Z3T1 314 aa13.52□□□□□ -0.25
UBE3D-208ENST00000626828 GAPTQ8N292 157 aa13.52□□□□□ -0.25
UBE3D-208ENST00000626828 OR52M1Q8NGK5 317 aa13.52□□□□□ -0.25
UBE3D-208ENST00000626828 URM1Q9BTM9 101 aaKnown RBP13.52□□□□□ -0.25
UBE3D-208ENST00000626828 TM2D1Q9BX74 207 aa13.52□□□□□ -0.25
UBE3D-208ENST00000626828 C16orf95Q9H693 158 aa13.52□□□□□ -0.25
UBE3D-208ENST00000626828 PITPNC1Q9UKF7 332 aa13.52□□□□□ -0.25
UBE3D-208ENST00000626828 FAM172BPA6NC97 362 aa13.51□□□□□ -0.25
UBE3D-208ENST00000626828 C15orf65H3BRN8 121 aa13.51□□□□□ -0.25
UBE3D-208ENST00000626828 J3QR06 171 aa13.51□□□□□ -0.25
UBE3D-208ENST00000626828 BRS3P32247 399 aa13.51□□□□□ -0.25
UBE3D-208ENST00000626828 P2RY14Q15391 338 aa13.51□□□□□ -0.25
UBE3D-208ENST00000626828 HLA-DRB5Q30154 266 aa13.51□□□□□ -0.25
UBE3D-208ENST00000626828 KCTD21Q4G0X4 260 aa13.51□□□□□ -0.25
UBE3D-208ENST00000626828 PLA1AQ53H76 456 aa13.51□□□□□ -0.25
UBE3D-208ENST00000626828 TRAT1Q6PIZ9 186 aa13.51□□□□□ -0.25
UBE3D-208ENST00000626828 Q6ZSV7 163 aa13.51□□□□□ -0.25
UBE3D-208ENST00000626828 LINC01006Q8NI28 216 aa13.51□□□□□ -0.25
UBE3D-208ENST00000626828 PSG11Q9UQ72 335 aa13.51□□□□□ -0.25
UBE3D-208ENST00000626828 OOSP1A8MZH6 123 aa13.5□□□□□ -0.25
UBE3D-208ENST00000626828 SPINT2O43291 252 aa13.5□□□□□ -0.25
UBE3D-208ENST00000626828 MYL9P24844 172 aa13.5□□□□□ -0.25
UBE3D-208ENST00000626828 BLVRBP30043 206 aaPredicted RBP13.5□□□□□ -0.25
UBE3D-208ENST00000626828 FGF9P31371 208 aaPredicted RBP13.5□□□□□ -0.25
UBE3D-208ENST00000626828 SSTR5P35346 364 aa13.5□□□□□ -0.25
UBE3D-208ENST00000626828 ARHGDIBP52566 201 aa13.5□□□□□ -0.25
UBE3D-208ENST00000626828 UNC119Q13432 240 aa13.5□□□□□ -0.25
UBE3D-208ENST00000626828 LTC4SQ16873 150 aa13.5□□□□□ -0.25
UBE3D-208ENST00000626828 C2orf76Q3KRA6 126 aa13.5□□□□□ -0.25
UBE3D-208ENST00000626828 C6orf183Q5T699 404 aa13.5□□□□□ -0.25
UBE3D-208ENST00000626828 OR51D1Q8NGF3 324 aa13.5□□□□□ -0.25
UBE3D-208ENST00000626828 OR4K15Q8NH41 348 aa13.5□□□□□ -0.25
UBE3D-208ENST00000626828 FAM3DQ96BQ1 224 aa13.5□□□□□ -0.25
UBE3D-208ENST00000626828 MMP28Q9H239 520 aa13.5□□□□□ -0.25
UBE3D-208ENST00000626828 KCNIP1Q9NZI2 227 aa13.5□□□□□ -0.25
UBE3D-208ENST00000626828 FBLN5Q9UBX5 448 aa13.5□□□□□ -0.25
UBE3D-208ENST00000626828 TCF19Q9Y242 345 aa13.5□□□□□ -0.25
UBE3D-208ENST00000626828 AMMECR1Q9Y4X0 333 aaPredicted RBP13.5□□□□□ -0.25
UBE3D-208ENST00000626828 RNF114Q9Y508 228 aa13.5□□□□□ -0.25
UBE3D-208ENST00000626828 A6NDX4 124 aa13.49□□□□□ -0.25
UBE3D-208ENST00000626828 LY6LH3BQJ8 138 aa13.49□□□□□ -0.25
UBE3D-208ENST00000626828 F2RL2O00254 374 aa13.49□□□□□ -0.25
UBE3D-208ENST00000626828 RAB3BP20337 219 aa13.49□□□□□ -0.25
UBE3D-208ENST00000626828 CHATP28329 748 aa13.49□□□□□ -0.25
UBE3D-208ENST00000626828 KIR2DS4P43632 304 aa13.49□□□□□ -0.25
UBE3D-208ENST00000626828 NKAPLQ5M9Q1 402 aa13.49□□□□□ -0.25
UBE3D-208ENST00000626828 C22orf42Q6IC83 251 aa13.49□□□□□ -0.25
UBE3D-208ENST00000626828 CCDC144NLQ6NUI1 221 aa13.49□□□□□ -0.25
UBE3D-208ENST00000626828 ZNF554Q86TJ5 538 aa13.49□□□□□ -0.25
UBE3D-208ENST00000626828 FAM89BQ8N5H3 189 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms