RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 UBE2KP61086 200 aa0.53□□□□□ -2.32
SNORA28-201ENST00000606769 PDGFRLQ15198 375 aa0.53□□□□□ -2.32
SNORA28-201ENST00000606769 TRIP13Q15645 432 aaPredicted RBP0.53□□□□□ -2.32
SNORA28-201ENST00000606769 GOLGA7BQ2TAP0 167 aa0.53□□□□□ -2.32
SNORA28-201ENST00000606769 PYCR3Q53H96 274 aa0.53□□□□□ -2.32
SNORA28-201ENST00000606769 TTMPQ5BVD1 217 aa0.53□□□□□ -2.32
SNORA28-201ENST00000606769 NIPAL1Q6NVV3 410 aa0.53□□□□□ -2.32
SNORA28-201ENST00000606769 TMPPEQ6ZT21 453 aa0.53□□□□□ -2.32
SNORA28-201ENST00000606769 AHSA2Q719I0 299 aa0.53□□□□□ -2.32
SNORA28-201ENST00000606769 COPS6Q7L5N1 327 aa0.53□□□□□ -2.32
SNORA28-201ENST00000606769 ST13P4Q8IZP2 240 aaPredicted RBP0.53□□□□□ -2.32
SNORA28-201ENST00000606769 MUC15Q8N387 334 aa0.53□□□□□ -2.32
SNORA28-201ENST00000606769 OR10P1Q8NGE3 313 aa0.53□□□□□ -2.32
SNORA28-201ENST00000606769 OR9I1Q8NGQ6 314 aa0.53□□□□□ -2.32
SNORA28-201ENST00000606769 ANGPTL6Q8NI99 470 aa0.53□□□□□ -2.32
SNORA28-201ENST00000606769 PDCD6IPQ8WUM4 868 aaKnown RBP0.53□□□□□ -2.32
SNORA28-201ENST00000606769 PITX2Q99697 317 aa0.53□□□□□ -2.32
SNORA28-201ENST00000606769 UPK3BQ9BT76 320 aa0.53□□□□□ -2.32
SNORA28-201ENST00000606769 TAPBPLQ9BX59 468 aa0.53□□□□□ -2.32
SNORA28-201ENST00000606769 KRTAP4-1Q9BYQ7 146 aa0.53□□□□□ -2.32
SNORA28-201ENST00000606769 VCX3AQ9NNX9 186 aa0.53□□□□□ -2.32
SNORA28-201ENST00000606769 MRPL16Q9NX20 251 aaKnown RBP0.53□□□□□ -2.32
SNORA28-201ENST00000606769 SLIT2O94813 1529 aa0.53□□□□□ -2.33
SNORA28-201ENST00000606769 OTOGLQ3ZCN5 2332 aa0.53□□□□□ -2.33
SNORA28-201ENST00000606769 RAB19A4D1S5 217 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 C19orf71A6NCJ1 209 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 RNASEK-C17orf49H0YIS7 233 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 J3QKU1 62 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 GPR171O14626 319 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 OVOL1O14753 267 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 SLC25A20O43772 301 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 SPOPO43791 374 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 GIMD1P0DJR0 217 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 P0DMU3 169 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 FAM231AP0DMU4 169 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 FAM231CP0DMU5 169 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 BLVRBP30043 206 aaPredicted RBP0.52□□□□□ -2.33
SNORA28-201ENST00000606769 GABRA4P48169 554 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 INPP1P49441 399 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 HADHBP55084 474 aaKnown RBP0.52□□□□□ -2.33
SNORA28-201ENST00000606769 DSTNP60981 165 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 DYNLL1P63167 89 aaKnown RBP0.52□□□□□ -2.33
SNORA28-201ENST00000606769 TNNC1P63316 161 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 BSPH1Q075Z2 132 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 STX3Q13277 289 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 WDR43Q15061 677 aaKnown RBP eCLIP0.52□□□□□ -2.33
SNORA28-201ENST00000606769 CST6Q15828 149 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 TPRXLQ17RH7 258 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 BSXQ3C1V8 233 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 AADACL4Q5VUY2 407 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 EBLN2Q6P2I7 272 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 XKRXQ6PP77 449 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 SDIM1Q6ZPB5 146 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 VN1R4Q7Z5H5 301 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 C10orf107Q8IVU9 208 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 C2orf73Q8N5S3 287 aaPredicted RBP0.52□□□□□ -2.33
SNORA28-201ENST00000606769 FER1L6-AS1Q8NA97 138 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 OR11L1Q8NGX0 322 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 FAM45AQ8TCE6 357 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 TMEM239Q8WW34 195 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 RORBQ92753 470 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 CLDN23Q96B33 292 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 MSANTD3Q96H12 275 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 FAM210AQ96ND0 272 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 SIKE1Q9BRV8 207 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 FAAP24Q9BTP7 215 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 C1QTNF6Q9BXI9 259 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 POTEKPQ9BYX7 375 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 CHST5Q9GZS9 411 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 AICDAQ9GZX7 198 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 AGPAT3Q9NRZ7 376 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 NAGKQ9UJ70 344 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 VPREB3Q9UKI3 123 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 STRCP1A6NGW2 1772 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 ATAD5Q96QE3 1844 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 PLXNA3P51805 1871 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 TRPM6Q9BX84 2022 aa0.52□□□□□ -2.33
SNORA28-201ENST00000606769 TRAV8-2A0A0B4J237 113 aa0.51□□□□□ -2.33
SNORA28-201ENST00000606769 TRGV4A0A0C4DH28 118 aa0.51□□□□□ -2.33
SNORA28-201ENST00000606769 LOC100506127A0A0U1RQW1 187 aa0.51□□□□□ -2.33
SNORA28-201ENST00000606769 ABCB11O95342 1321 aa0.51□□□□□ -2.33
SNORA28-201ENST00000606769 LDOC1O95751 146 aaPredicted RBP0.51□□□□□ -2.33
SNORA28-201ENST00000606769 GYPCP04921 128 aa0.51□□□□□ -2.33
SNORA28-201ENST00000606769 MLNP12872 115 aa0.51□□□□□ -2.33
SNORA28-201ENST00000606769 GZMHP20718 246 aa0.51□□□□□ -2.33
SNORA28-201ENST00000606769 PYCR1P32322 319 aa0.51□□□□□ -2.33
SNORA28-201ENST00000606769 NUP62P37198 522 aaPredicted RBP0.51□□□□□ -2.33
SNORA28-201ENST00000606769 ETV1P50549 477 aa0.51□□□□□ -2.33
SNORA28-201ENST00000606769 RAB25P57735 213 aa0.51□□□□□ -2.33
SNORA28-201ENST00000606769 LINC00313P59037 77 aa0.51□□□□□ -2.33
SNORA28-201ENST00000606769 TSPAN5P62079 268 aa0.51□□□□□ -2.33
SNORA28-201ENST00000606769 VSNL1P62760 191 aa0.51□□□□□ -2.33
SNORA28-201ENST00000606769 DEFA6Q01524 100 aa0.51□□□□□ -2.33
SNORA28-201ENST00000606769 Q3ZCU0 254 aa0.51□□□□□ -2.33
SNORA28-201ENST00000606769 OLIG3Q7RTU3 272 aa0.51□□□□□ -2.33
SNORA28-201ENST00000606769 NIT1Q86X76 327 aa0.51□□□□□ -2.33
SNORA28-201ENST00000606769 OR5C1Q8NGR4 320 aa0.51□□□□□ -2.33
SNORA28-201ENST00000606769 MFSD8Q8NHS3 518 aa0.51□□□□□ -2.33
SNORA28-201ENST00000606769 LRRC20Q8TCA0 184 aa0.51□□□□□ -2.33
SNORA28-201ENST00000606769 HIST1H2BAQ96A08 127 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms