RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 TMEM59Q9BXS4 323 aa13.41□□□□□ -0.26
CDT1-202ENST00000562747 PEX16Q9Y5Y5 336 aa13.41□□□□□ -0.26
CDT1-202ENST00000562747 V9GY05 133 aa13.41□□□□□ -0.26
CDT1-202ENST00000562747 TMEM14DPA8MWL7 114 aa13.4□□□□□ -0.26
CDT1-202ENST00000562747 NPIPB11E5RHQ5 1161 aa13.4□□□□□ -0.26
CDT1-202ENST00000562747 PDCD5O14737 125 aa13.4□□□□□ -0.26
CDT1-202ENST00000562747 GPR137BO60478 399 aa13.4□□□□□ -0.26
CDT1-202ENST00000562747 PDCD6O75340 191 aa13.4□□□□□ -0.26
CDT1-202ENST00000562747 CA11O75493 328 aa13.4□□□□□ -0.26
CDT1-202ENST00000562747 GZMHP20718 246 aa13.4□□□□□ -0.26
CDT1-202ENST00000562747 MYL9P24844 172 aa13.4□□□□□ -0.26
CDT1-202ENST00000562747 GDNFP39905 211 aa13.4□□□□□ -0.26
CDT1-202ENST00000562747 RELBQ01201 579 aa13.4□□□□□ -0.26
CDT1-202ENST00000562747 SIGIRRQ6IA17 410 aa13.4□□□□□ -0.26
CDT1-202ENST00000562747 OR2W3Q7Z3T1 314 aa13.4□□□□□ -0.26
CDT1-202ENST00000562747 OR10A7Q8NGE5 316 aa13.4□□□□□ -0.26
CDT1-202ENST00000562747 KIRREL1Q96J84 757 aa13.4□□□□□ -0.26
CDT1-202ENST00000562747 TM2D1Q9BX74 207 aa13.4□□□□□ -0.26
CDT1-202ENST00000562747 IDI2-AS1Q9NZ38 188 aa13.4□□□□□ -0.26
CDT1-202ENST00000562747 VGLL3A8MV65 326 aa13.39□□□□□ -0.27
CDT1-202ENST00000562747 H3BUX3 64 aa13.39□□□□□ -0.27
CDT1-202ENST00000562747 MT-ND4P03905 459 aa13.39□□□□□ -0.27
CDT1-202ENST00000562747 ARSBP15848 533 aa13.39□□□□□ -0.27
CDT1-202ENST00000562747 KRTAP10-3P60369 221 aa13.39□□□□□ -0.27
CDT1-202ENST00000562747 QRFPP83859 136 aa13.39□□□□□ -0.27
CDT1-202ENST00000562747 UNC119Q13432 240 aa13.39□□□□□ -0.27
CDT1-202ENST00000562747 RAB11BQ15907 218 aa13.39□□□□□ -0.27
CDT1-202ENST00000562747 LDLRAD2Q5SZI1 272 aa13.39□□□□□ -0.27
CDT1-202ENST00000562747 SYT6Q5T7P8 510 aaPredicted RBP13.39□□□□□ -0.27
CDT1-202ENST00000562747 OR10K2Q6IF99 312 aa13.39□□□□□ -0.27
CDT1-202ENST00000562747 BAIAP2L2Q6UXY1 529 aa13.39□□□□□ -0.27
CDT1-202ENST00000562747 GAPTQ8N292 157 aa13.39□□□□□ -0.27
CDT1-202ENST00000562747 OR4P4Q8NGL7 312 aa13.39□□□□□ -0.27
CDT1-202ENST00000562747 ETAA1Q9NY74 926 aa13.39□□□□□ -0.27
CDT1-202ENST00000562747 WNK1Q9H4A3 2382 aa13.38□□□□□ -0.27
CDT1-202ENST00000562747 AIPO00170 330 aa13.38□□□□□ -0.27
CDT1-202ENST00000562747 ORC5O43913 435 aa13.38□□□□□ -0.27
CDT1-202ENST00000562747 NDUFA7O95182 113 aa13.38□□□□□ -0.27
CDT1-202ENST00000562747 TNFAIP8O95379 198 aa13.38□□□□□ -0.27
CDT1-202ENST00000562747 IGLV1-47P01700 117 aa13.38□□□□□ -0.27
CDT1-202ENST00000562747 NFYBP25208 207 aa13.38□□□□□ -0.27
CDT1-202ENST00000562747 HTR1DP28221 377 aa13.38□□□□□ -0.27
CDT1-202ENST00000562747 FGF9P31371 208 aaPredicted RBP13.38□□□□□ -0.27
CDT1-202ENST00000562747 PRRX1P54821 245 aa13.38□□□□□ -0.27
CDT1-202ENST00000562747 P2RY14Q15391 338 aa13.38□□□□□ -0.27
CDT1-202ENST00000562747 SSX2Q16385 188 aa13.38□□□□□ -0.27
CDT1-202ENST00000562747 C22orf42Q6IC83 251 aa13.38□□□□□ -0.27
CDT1-202ENST00000562747 SLC16A12Q6ZSM3 486 aa13.38□□□□□ -0.27
CDT1-202ENST00000562747 DYNAPQ8N1N2 210 aa13.38□□□□□ -0.27
CDT1-202ENST00000562747 NDNFQ8TB73 568 aa13.38□□□□□ -0.27
CDT1-202ENST00000562747 CREB3L1Q96BA8 519 aa13.38□□□□□ -0.27
CDT1-202ENST00000562747 NEDD4LQ96PU5 975 aa13.38□□□□□ -0.27
CDT1-202ENST00000562747 URM1Q9BTM9 101 aaKnown RBP13.38□□□□□ -0.27
CDT1-202ENST00000562747 ZNF286AQ9HBT8 521 aa13.38□□□□□ -0.27
CDT1-202ENST00000562747 C1RLQ9NZP8 487 aa13.38□□□□□ -0.27
CDT1-202ENST00000562747 STUB1Q9UNE7 303 aa13.38□□□□□ -0.27
CDT1-202ENST00000562747 TRAV39A0A0B4J263 110 aa13.37□□□□□ -0.27
CDT1-202ENST00000562747 A0A1B0GUS0 222 aa13.37□□□□□ -0.27
CDT1-202ENST00000562747 SHISA3A0PJX4 238 aa13.37□□□□□ -0.27
CDT1-202ENST00000562747 FAM172BPA6NC97 362 aa13.37□□□□□ -0.27
CDT1-202ENST00000562747 TOR1AO14656 332 aa13.37□□□□□ -0.27
CDT1-202ENST00000562747 PAX6P26367 422 aa13.37□□□□□ -0.27
CDT1-202ENST00000562747 CHATP28329 748 aa13.37□□□□□ -0.27
CDT1-202ENST00000562747 SSTR5P35346 364 aa13.37□□□□□ -0.27
CDT1-202ENST00000562747 DYNLT3P51808 116 aa13.37□□□□□ -0.27
CDT1-202ENST00000562747 RAG2P55895 527 aa13.37□□□□□ -0.27
CDT1-202ENST00000562747 FAM189A2Q15884 450 aa13.37□□□□□ -0.27
CDT1-202ENST00000562747 HLA-DRB5Q30154 266 aa13.37□□□□□ -0.27
CDT1-202ENST00000562747 OR4F5Q8NH21 305 aa13.37□□□□□ -0.27
CDT1-202ENST00000562747 OR9G1Q8NH87 305 aa13.37□□□□□ -0.27
CDT1-202ENST00000562747 CCDC107Q8WV48 283 aa13.37□□□□□ -0.27
CDT1-202ENST00000562747 CITED1Q99966 193 aa13.37□□□□□ -0.27
CDT1-202ENST00000562747 KCNK15Q9H427 330 aa13.37□□□□□ -0.27
CDT1-202ENST00000562747 RAB9BQ9NP90 201 aa13.37□□□□□ -0.27
CDT1-202ENST00000562747 DPM3Q9P2X0 92 aa13.37□□□□□ -0.27
CDT1-202ENST00000562747 FBLN5Q9UBX5 448 aa13.37□□□□□ -0.27
CDT1-202ENST00000562747 STEAP1Q9UHE8 339 aa13.37□□□□□ -0.27
CDT1-202ENST00000562747 TRAPPC2LQ9UL33 140 aa13.37□□□□□ -0.27
CDT1-202ENST00000562747 LEUTXA8MZ59 168 aa13.36□□□□□ -0.27
CDT1-202ENST00000562747 C15orf65H3BRN8 121 aa13.36□□□□□ -0.27
CDT1-202ENST00000562747 RAB3BP20337 219 aa13.36□□□□□ -0.27
CDT1-202ENST00000562747 NEDD8Q15843 81 aa13.36□□□□□ -0.27
CDT1-202ENST00000562747 NKAPLQ5M9Q1 402 aa13.36□□□□□ -0.27
CDT1-202ENST00000562747 C6orf183Q5T699 404 aa13.36□□□□□ -0.27
CDT1-202ENST00000562747 DHRS7BQ6IAN0 325 aaPredicted RBP13.36□□□□□ -0.27
CDT1-202ENST00000562747 TRAT1Q6PIZ9 186 aa13.36□□□□□ -0.27
CDT1-202ENST00000562747 LIAT1Q6ZQX7 453 aa13.36□□□□□ -0.27
CDT1-202ENST00000562747 OR51D1Q8NGF3 324 aa13.36□□□□□ -0.27
CDT1-202ENST00000562747 OR52M1Q8NGK5 317 aa13.36□□□□□ -0.27
CDT1-202ENST00000562747 RFESDQ8TAC1 157 aa13.36□□□□□ -0.27
CDT1-202ENST00000562747 PIFOQ8TCI5 191 aa13.36□□□□□ -0.27
CDT1-202ENST00000562747 ARL11Q969Q4 196 aa13.36□□□□□ -0.27
CDT1-202ENST00000562747 FAM3DQ96BQ1 224 aa13.36□□□□□ -0.27
CDT1-202ENST00000562747 NICN1Q9BSH3 213 aa13.36□□□□□ -0.27
CDT1-202ENST00000562747 LPAR5Q9H1C0 372 aa13.36□□□□□ -0.27
CDT1-202ENST00000562747 RAB18Q9NP72 206 aa13.36□□□□□ -0.27
CDT1-202ENST00000562747 ABCB10Q9NRK6 738 aa13.36□□□□□ -0.27
CDT1-202ENST00000562747 TXNL4BQ9NX01 149 aaKnown RBP13.36□□□□□ -0.27
CDT1-202ENST00000562747 SSR3Q9UNL2 185 aa13.36□□□□□ -0.27
CDT1-202ENST00000562747 HILPDAQ9Y5L2 63 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms