RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 UBE2UQ5VVX9 321 aa16.43■□□□□ 0.22
FOXA1-203ENST00000553751 OR10K2Q6IF99 312 aa16.43■□□□□ 0.22
FOXA1-203ENST00000553751 SHISA2Q6UWI4 295 aa16.43■□□□□ 0.22
FOXA1-203ENST00000553751 LIAT1Q6ZQX7 453 aa16.43■□□□□ 0.22
FOXA1-203ENST00000553751 SPARTQ8N0X7 666 aa16.43■□□□□ 0.22
FOXA1-203ENST00000553751 OR6M1Q8NGM8 313 aa16.43■□□□□ 0.22
FOXA1-203ENST00000553751 RFESDQ8TAC1 157 aa16.43■□□□□ 0.22
FOXA1-203ENST00000553751 WFDC12Q8WWY7 111 aa16.43■□□□□ 0.22
FOXA1-203ENST00000553751 C16orf95Q9H693 158 aa16.43■□□□□ 0.22
FOXA1-203ENST00000553751 TCF19Q9Y242 345 aa16.43■□□□□ 0.22
FOXA1-203ENST00000553751 MCRIP1C9JLW8 97 aa16.42■□□□□ 0.22
FOXA1-203ENST00000553751 AIPO00170 330 aa16.42■□□□□ 0.22
FOXA1-203ENST00000553751 TSPAN9O75954 239 aa16.42■□□□□ 0.22
FOXA1-203ENST00000553751 MT-ND4P03905 459 aa16.42■□□□□ 0.22
FOXA1-203ENST00000553751 QRFPP83859 136 aa16.42■□□□□ 0.22
FOXA1-203ENST00000553751 UNC119Q13432 240 aa16.42■□□□□ 0.22
FOXA1-203ENST00000553751 CD200R1LQ6Q8B3 271 aa16.42■□□□□ 0.22
FOXA1-203ENST00000553751 GAPTQ8N292 157 aa16.42■□□□□ 0.22
FOXA1-203ENST00000553751 OR10A7Q8NGE5 316 aa16.42■□□□□ 0.22
FOXA1-203ENST00000553751 ETAA1Q9NY74 926 aa16.42■□□□□ 0.22
FOXA1-203ENST00000553751 DPM3Q9P2X0 92 aa16.42■□□□□ 0.22
FOXA1-203ENST00000553751 AK6Q9Y3D8 172 aaKnown RBP16.42■□□□□ 0.22
FOXA1-203ENST00000553751 PEX16Q9Y5Y5 336 aa16.42■□□□□ 0.22
FOXA1-203ENST00000553751 TMEM14DPA8MWL7 114 aa16.41■□□□□ 0.22
FOXA1-203ENST00000553751 C15orf65H3BRN8 121 aa16.41■□□□□ 0.22
FOXA1-203ENST00000553751 BUB1B-PAK6H3BSN5 160 aa16.41■□□□□ 0.22
FOXA1-203ENST00000553751 SLC17A2O00624 439 aa16.41■□□□□ 0.22
FOXA1-203ENST00000553751 PDCD6O75340 191 aa16.41■□□□□ 0.22
FOXA1-203ENST00000553751 BPNT1O95861 308 aa16.41■□□□□ 0.22
FOXA1-203ENST00000553751 GLAP06280 429 aa16.41■□□□□ 0.22
FOXA1-203ENST00000553751 GZMHP20718 246 aa16.41■□□□□ 0.22
FOXA1-203ENST00000553751 FUT3P21217 361 aa16.41■□□□□ 0.22
FOXA1-203ENST00000553751 RPS27AP62979 156 aaKnown RBP16.41■□□□□ 0.22
FOXA1-203ENST00000553751 LTC4SQ16873 150 aa16.41■□□□□ 0.22
FOXA1-203ENST00000553751 CCBE1Q6UXH8 406 aaPredicted RBP16.41■□□□□ 0.22
FOXA1-203ENST00000553751 OR9G1Q8NH87 305 aa16.41■□□□□ 0.22
FOXA1-203ENST00000553751 KCNG3Q8TAE7 436 aa16.41■□□□□ 0.22
FOXA1-203ENST00000553751 CCDC107Q8WV48 283 aa16.41■□□□□ 0.22
FOXA1-203ENST00000553751 LEAP2Q969E1 77 aa16.41■□□□□ 0.22
FOXA1-203ENST00000553751 TMEM59Q9BXS4 323 aa16.41■□□□□ 0.22
FOXA1-203ENST00000553751 RAB18Q9NP72 206 aa16.41■□□□□ 0.22
FOXA1-203ENST00000553751 ABCB10Q9NRK6 738 aa16.41■□□□□ 0.22
FOXA1-203ENST00000553751 LRRC42Q9Y546 428 aa16.41■□□□□ 0.22
FOXA1-203ENST00000553751 A6NDX4 124 aa16.4■□□□□ 0.22
FOXA1-203ENST00000553751 LEUTXA8MZ59 168 aa16.4■□□□□ 0.22
FOXA1-203ENST00000553751 LY6LH3BQJ8 138 aa16.4■□□□□ 0.22
FOXA1-203ENST00000553751 TOR1AO14656 332 aa16.4■□□□□ 0.22
FOXA1-203ENST00000553751 PRRX1P54821 245 aa16.4■□□□□ 0.22
FOXA1-203ENST00000553751 P2RY14Q15391 338 aa16.4■□□□□ 0.22
FOXA1-203ENST00000553751 NICN1Q9BSH3 213 aa16.4■□□□□ 0.22
FOXA1-203ENST00000553751 TM2D1Q9BX74 207 aa16.4■□□□□ 0.22
FOXA1-203ENST00000553751 MMP28Q9H239 520 aa16.4■□□□□ 0.22
FOXA1-203ENST00000553751 PLGRKTQ9HBL7 147 aa16.4■□□□□ 0.22
FOXA1-203ENST00000553751 RNF114Q9Y508 228 aa16.4■□□□□ 0.22
FOXA1-203ENST00000553751 NBEAL1Q6ZS30 2694 aa16.39■□□□□ 0.21
FOXA1-203ENST00000553751 SHISA3A0PJX4 238 aa16.39■□□□□ 0.21
FOXA1-203ENST00000553751 UBE2QL1A1L167 161 aa16.39■□□□□ 0.21
FOXA1-203ENST00000553751 H3BUI4 141 aa16.39■□□□□ 0.21
FOXA1-203ENST00000553751 J3QR06 171 aa16.39■□□□□ 0.21
FOXA1-203ENST00000553751 F2RL2O00254 374 aa16.39■□□□□ 0.21
FOXA1-203ENST00000553751 CCRL2O00421 344 aa16.39■□□□□ 0.21
FOXA1-203ENST00000553751 ORC5O43913 435 aa16.39■□□□□ 0.21
FOXA1-203ENST00000553751 CA11O75493 328 aa16.39■□□□□ 0.21
FOXA1-203ENST00000553751 IGHV3-7P01780 117 aa16.39■□□□□ 0.21
FOXA1-203ENST00000553751 CHATP28329 748 aa16.39■□□□□ 0.21
FOXA1-203ENST00000553751 PROK1P58294 105 aa16.39■□□□□ 0.21
FOXA1-203ENST00000553751 NKAPLQ5M9Q1 402 aa16.39■□□□□ 0.21
FOXA1-203ENST00000553751 TPTE2P1Q5T6R2 138 aa16.39■□□□□ 0.21
FOXA1-203ENST00000553751 ZNF773Q6PK81 442 aa16.39■□□□□ 0.21
FOXA1-203ENST00000553751 UBALD1Q8TB05 177 aa16.39■□□□□ 0.21
FOXA1-203ENST00000553751 FCGR1BQ92637 280 aa16.39■□□□□ 0.21
FOXA1-203ENST00000553751 ARL11Q969Q4 196 aa16.39■□□□□ 0.21
FOXA1-203ENST00000553751 CREB3L1Q96BA8 519 aa16.39■□□□□ 0.21
FOXA1-203ENST00000553751 PSG11Q9UQ72 335 aa16.39■□□□□ 0.21
FOXA1-203ENST00000553751 TRRAPQ9Y4A5 3859 aa16.38■□□□□ 0.21
FOXA1-203ENST00000553751 TRDV1A0A1B0GX56 115 aa16.38■□□□□ 0.21
FOXA1-203ENST00000553751 ARSBP15848 533 aa16.38■□□□□ 0.21
FOXA1-203ENST00000553751 PSMB9P28065 219 aa16.38■□□□□ 0.21
FOXA1-203ENST00000553751 CEACAM3P40198 252 aa16.38■□□□□ 0.21
FOXA1-203ENST00000553751 SRSF4Q08170 494 aaKnown RBP16.38■□□□□ 0.21
FOXA1-203ENST00000553751 RAB11BQ15907 218 aa16.38■□□□□ 0.21
FOXA1-203ENST00000553751 SYT6Q5T7P8 510 aaPredicted RBP16.38■□□□□ 0.21
FOXA1-203ENST00000553751 SLC16A12Q6ZSM3 486 aa16.38■□□□□ 0.21
FOXA1-203ENST00000553751 OR2W3Q7Z3T1 314 aa16.38■□□□□ 0.21
FOXA1-203ENST00000553751 TMEM219Q86XT9 240 aa16.38■□□□□ 0.21
FOXA1-203ENST00000553751 OR4K15Q8NH41 348 aa16.38■□□□□ 0.21
FOXA1-203ENST00000553751 RANBP3Q9H6Z4 567 aaPredicted RBP16.38■□□□□ 0.21
FOXA1-203ENST00000553751 PITPNC1Q9UKF7 332 aa16.38■□□□□ 0.21
FOXA1-203ENST00000553751 TRAPPC2LQ9UL33 140 aa16.38■□□□□ 0.21
FOXA1-203ENST00000553751 A0A0A6YYD4 124 aa16.37■□□□□ 0.21
FOXA1-203ENST00000553751 TRAV1-2A0A0B4J238 106 aa16.37■□□□□ 0.21
FOXA1-203ENST00000553751 C12orf77C9JDV5 145 aa16.37■□□□□ 0.21
FOXA1-203ENST00000553751 GALP22466 123 aa16.37■□□□□ 0.21
FOXA1-203ENST00000553751 GNG10P50151 68 aa16.37■□□□□ 0.21
FOXA1-203ENST00000553751 LOXL3P58215 753 aa16.37■□□□□ 0.21
FOXA1-203ENST00000553751 KRTAP10-3P60369 221 aa16.37■□□□□ 0.21
FOXA1-203ENST00000553751 OR52M1Q8NGK5 317 aa16.37■□□□□ 0.21
FOXA1-203ENST00000553751 OR4C13Q8NGP0 309 aa16.37■□□□□ 0.21
FOXA1-203ENST00000553751 SGMS2Q8NHU3 365 aa16.37■□□□□ 0.21
FOXA1-203ENST00000553751 NEDD4LQ96PU5 975 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms