RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 MED14OSP0DP75 135 aa4.62□□□□□ -1.67
GYPB-204ENST00000504951 TMEM11P17152 192 aa4.62□□□□□ -1.67
GYPB-204ENST00000504951 RBP2P50120 134 aa4.62□□□□□ -1.67
GYPB-204ENST00000504951 MTCP1P56278 107 aa4.62□□□□□ -1.67
GYPB-204ENST00000504951 NANOS3P60323 173 aaKnown RBP4.62□□□□□ -1.67
GYPB-204ENST00000504951 PAX5Q02548 391 aa4.62□□□□□ -1.67
GYPB-204ENST00000504951 ZNF85Q03923 595 aa4.62□□□□□ -1.67
GYPB-204ENST00000504951 SCN1BQ07699 218 aa4.62□□□□□ -1.67
GYPB-204ENST00000504951 ZNF816Q0VGE8 651 aaPredicted RBP4.62□□□□□ -1.67
GYPB-204ENST00000504951 PDZK1IP1Q13113 114 aa4.62□□□□□ -1.67
GYPB-204ENST00000504951 FLOT2Q14254 428 aa4.62□□□□□ -1.67
GYPB-204ENST00000504951 RBM39Q14498 530 aaKnown RBP4.62□□□□□ -1.67
GYPB-204ENST00000504951 CDK5R1Q15078 307 aa4.62□□□□□ -1.67
GYPB-204ENST00000504951 TP53I3Q53FA7 332 aa4.62□□□□□ -1.67
GYPB-204ENST00000504951 SPIN3Q5JUX0 258 aa4.62□□□□□ -1.67
GYPB-204ENST00000504951 Q6P435 159 aa4.62□□□□□ -1.67
GYPB-204ENST00000504951 IZUMO1Q8IYV9 350 aa4.62□□□□□ -1.67
GYPB-204ENST00000504951 Q8N9W7 124 aa4.62□□□□□ -1.67
GYPB-204ENST00000504951 OR10H4Q8NGA5 316 aa4.62□□□□□ -1.67
GYPB-204ENST00000504951 OR10A7Q8NGE5 316 aa4.62□□□□□ -1.67
GYPB-204ENST00000504951 OR51A4Q8NGJ6 313 aa4.62□□□□□ -1.67
GYPB-204ENST00000504951 OR5D18Q8NGL1 313 aa4.62□□□□□ -1.67
GYPB-204ENST00000504951 OR56B4Q8NH76 319 aa4.62□□□□□ -1.67
GYPB-204ENST00000504951 DCUN1D4Q92564 292 aa4.62□□□□□ -1.67
GYPB-204ENST00000504951 RPEQ96AT9 228 aa4.62□□□□□ -1.67
GYPB-204ENST00000504951 FGGYQ96C11 551 aa4.62□□□□□ -1.67
GYPB-204ENST00000504951 MNTQ99583 582 aa4.62□□□□□ -1.67
GYPB-204ENST00000504951 THAP7Q9BT49 309 aaPredicted RBP4.62□□□□□ -1.67
GYPB-204ENST00000504951 TEX12Q9BXU0 123 aa4.62□□□□□ -1.67
GYPB-204ENST00000504951 HIPK2Q9H2X6 1198 aa4.62□□□□□ -1.67
GYPB-204ENST00000504951 RHOFQ9HBH0 211 aa4.62□□□□□ -1.67
GYPB-204ENST00000504951 HMG20AQ9NP66 347 aa4.62□□□□□ -1.67
GYPB-204ENST00000504951 KRT84Q9NSB2 600 aa4.62□□□□□ -1.67
GYPB-204ENST00000504951 POMPQ9Y244 141 aa4.62□□□□□ -1.67
GYPB-204ENST00000504951 GSTK1Q9Y2Q3 226 aa4.62□□□□□ -1.67
GYPB-204ENST00000504951 TRGV10A0A0A0MS01 117 aa4.61□□□□□ -1.67
GYPB-204ENST00000504951 TRAV39A0A0B4J263 110 aa4.61□□□□□ -1.67
GYPB-204ENST00000504951 A0A1W2PPE3 182 aa4.61□□□□□ -1.67
GYPB-204ENST00000504951 ZNF729A6NN14 1252 aaPredicted RBP4.61□□□□□ -1.67
GYPB-204ENST00000504951 J3QR06 171 aa4.61□□□□□ -1.67
GYPB-204ENST00000504951 SLC33A1O00400 549 aaPredicted RBP4.61□□□□□ -1.67
GYPB-204ENST00000504951 ATP8B1O43520 1251 aa4.61□□□□□ -1.67
GYPB-204ENST00000504951 SAP30O75446 220 aa4.61□□□□□ -1.67
GYPB-204ENST00000504951 GATBO75879 557 aaKnown RBP4.61□□□□□ -1.67
GYPB-204ENST00000504951 KDM4BO94953 1096 aa4.61□□□□□ -1.67
GYPB-204ENST00000504951 OR2T7P0C7T2 308 aa4.61□□□□□ -1.67
GYPB-204ENST00000504951 ATF1P18846 271 aa4.61□□□□□ -1.67
GYPB-204ENST00000504951 VDAC1P21796 283 aa4.61□□□□□ -1.67
GYPB-204ENST00000504951 NFYBP25208 207 aa4.61□□□□□ -1.67
GYPB-204ENST00000504951 CD1BP29016 333 aa4.61□□□□□ -1.67
GYPB-204ENST00000504951 ATP1B3P54709 279 aa4.61□□□□□ -1.67
GYPB-204ENST00000504951 ZP1P60852 638 aa4.61□□□□□ -1.67
GYPB-204ENST00000504951 ACTR3P61158 418 aa4.61□□□□□ -1.67
GYPB-204ENST00000504951 MADCAM1Q13477 382 aa4.61□□□□□ -1.67
GYPB-204ENST00000504951 HNF4GQ14541 408 aa4.61□□□□□ -1.67
GYPB-204ENST00000504951 ATXN7L3Q14CW9 347 aaPredicted RBP4.61□□□□□ -1.67
GYPB-204ENST00000504951 KRBOX4Q5JUW0 171 aa4.61□□□□□ -1.67
GYPB-204ENST00000504951 KDM4DQ6B0I6 523 aa4.61□□□□□ -1.67
GYPB-204ENST00000504951 LGALS9CQ6DKI2 356 aa4.61□□□□□ -1.67
GYPB-204ENST00000504951 FAM53AQ6NSI3 398 aaPredicted RBP4.61□□□□□ -1.67
GYPB-204ENST00000504951 C8orf31Q8N9H6 132 aa4.61□□□□□ -1.67
GYPB-204ENST00000504951 DNAAF1Q8NEP3 725 aa4.61□□□□□ -1.67
GYPB-204ENST00000504951 OR4D6Q8NGJ1 314 aa4.61□□□□□ -1.67
GYPB-204ENST00000504951 OR13A1Q8NGR1 328 aa4.61□□□□□ -1.67
GYPB-204ENST00000504951 DNAJC9Q8WXX5 260 aa4.61□□□□□ -1.67
GYPB-204ENST00000504951 DLX4Q92988 240 aaPredicted RBP4.61□□□□□ -1.67
GYPB-204ENST00000504951 SLC7A6OSQ96CW6 309 aaPredicted RBP4.61□□□□□ -1.67
GYPB-204ENST00000504951 NRBF2Q96F24 287 aa4.61□□□□□ -1.67
GYPB-204ENST00000504951 EAF1Q96JC9 268 aaPredicted RBP4.61□□□□□ -1.67
GYPB-204ENST00000504951 OPALINQ96PE5 141 aa4.61□□□□□ -1.67
GYPB-204ENST00000504951 CIB1Q99828 191 aa4.61□□□□□ -1.67
GYPB-204ENST00000504951 ADI1Q9BV57 179 aa4.61□□□□□ -1.67
GYPB-204ENST00000504951 COMMD4Q9H0A8 199 aa4.61□□□□□ -1.67
GYPB-204ENST00000504951 EXOSC4Q9NPD3 245 aaKnown RBP4.61□□□□□ -1.67
GYPB-204ENST00000504951 SIGLEC8Q9NYZ4 499 aa4.61□□□□□ -1.67
GYPB-204ENST00000504951 H2AFY2Q9P0M6 372 aaPredicted RBP4.61□□□□□ -1.67
GYPB-204ENST00000504951 ZNF581Q9P0T4 197 aa4.61□□□□□ -1.67
GYPB-204ENST00000504951 GNG8Q9UK08 70 aa4.61□□□□□ -1.67
GYPB-204ENST00000504951 MRPS28Q9Y2Q9 187 aaKnown RBP4.61□□□□□ -1.67
GYPB-204ENST00000504951 MUC4Q99102 2169 aa4.61□□□□□ -1.67
GYPB-204ENST00000504951 TRAV24A0A0B4J272 114 aa4.6□□□□□ -1.67
GYPB-204ENST00000504951 KBTBD11-OT1A0A1B0GTJ5 212 aa4.6□□□□□ -1.67
GYPB-204ENST00000504951 NPIPB11E5RHQ5 1161 aa4.6□□□□□ -1.67
GYPB-204ENST00000504951 LINC01619G3V211 115 aa4.6□□□□□ -1.67
GYPB-204ENST00000504951 G3V2T6 193 aa4.6□□□□□ -1.67
GYPB-204ENST00000504951 H0Y980 276 aa4.6□□□□□ -1.67
GYPB-204ENST00000504951 HSPB6O14558 160 aa4.6□□□□□ -1.67
GYPB-204ENST00000504951 SH2D1BO14796 132 aa4.6□□□□□ -1.67
GYPB-204ENST00000504951 SULT1C4O75897 302 aa4.6□□□□□ -1.67
GYPB-204ENST00000504951 LY6G6CO95867 125 aa4.6□□□□□ -1.67
GYPB-204ENST00000504951 SERPINA3P01011 423 aa4.6□□□□□ -1.67
GYPB-204ENST00000504951 UBCP0CG48 685 aaKnown RBP4.6□□□□□ -1.67
GYPB-204ENST00000504951 ZNF44P15621 663 aa4.6□□□□□ -1.67
GYPB-204ENST00000504951 HTR1FP30939 366 aa4.6□□□□□ -1.67
GYPB-204ENST00000504951 PTGFRP43088 359 aa4.6□□□□□ -1.67
GYPB-204ENST00000504951 RAB9AP51151 201 aa4.6□□□□□ -1.67
GYPB-204ENST00000504951 CRIP2P52943 208 aaPredicted RBP4.6□□□□□ -1.67
GYPB-204ENST00000504951 GNB1P62873 340 aa4.6□□□□□ -1.67
GYPB-204ENST00000504951 LTC4SQ16873 150 aa4.6□□□□□ -1.67
GYPB-204ENST00000504951 Q3ZCU0 254 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms