RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 TRAV8-6A0A0B4J262 113 aa4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 FAM220BPB1ANY3 271 aa4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 EEF1E1-BLOC1S5C9J1V9 151 aa4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 D6RAR5 112 aa4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 K7EQS6 105 aa4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 FAAHO00519 579 aa4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 MYL12BO14950 172 aa4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 EEF1E1O43324 174 aaKnown RBP4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 MFSD11O43934 449 aa4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 PFDN1O60925 122 aa4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 ARL6IP5O75915 188 aa4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 BPGMP07738 259 aa4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 IGLL1P15814 213 aa4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 SDC4P31431 198 aa4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 CA5AP35218 305 aa4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 CTRLP40313 264 aa4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 H2BFSP57053 126 aa4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 SRPXP78539 464 aa4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 PRR3P79522 188 aaKnown RBP4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 GTF2BQ00403 316 aa4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 RUNX1Q01196 453 aa4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 LAMTOR4Q0VGL1 99 aa4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 SLC10A1Q14973 349 aa4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 ZNF718Q3SXZ3 478 aa4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 FAM162BQ5T6X4 162 aa4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 DCUN1D2Q6PH85 259 aa4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 C17orf82Q86X59 251 aaPredicted RBP4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 MUC15Q8N387 334 aa4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 FAM71E2Q8N5Q1 922 aa4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 L3HYPDHQ96EM0 354 aa4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 MRPL48Q96GC5 212 aaKnown RBP4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 AURKBQ96GD4 344 aaPredicted RBP4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 LINC00477Q96M19 166 aa4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 FOPNLQ96NB1 174 aa4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 C12orf57Q99622 126 aa4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 CDX2Q99626 313 aaPredicted RBP4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 ZNF747Q9BV97 191 aa4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 ULBP3Q9BZM4 244 aa4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 OR51I2Q9H344 312 aa4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 GNB4Q9HAV0 340 aa4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 RRAGDQ9NQL2 400 aaPredicted RBP4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 JPT1Q9UK76 154 aa4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 ZNF780BQ9Y6R6 833 aa4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 PHF3Q92576 2039 aaKnown RBP4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 SZT2Q5T011 3432 aa4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 ZNF609O15014 1411 aa4.61□□□□□ -1.67
CBX1P3-201ENST00000413296 COL11A2P13942 1736 aaPredicted RBP4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 SAA2-SAA4A0A096LPE2 208 aa4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 A0A1B0GXF2 115 aa4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 FOXI3A8MTJ6 420 aaPredicted RBP4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 H0Y9J4 135 aa4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 C16orf97H3BN30 126 aa4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 EDIL3O43854 480 aa4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 NDUFS5O43920 106 aa4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 TTRP02766 147 aa4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 IGHV1-2P23083 117 aa4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 S100A7P31151 101 aa4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 NDUFA8P51970 172 aa4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 DEFA6Q01524 100 aa4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 INCA1Q0VD86 236 aa4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 PMAIP1Q13794 54 aa4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 C1DQ13901 141 aaKnown RBP4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 BATFQ16520 125 aa4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 C17orf58Q2M2W7 97 aa4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 TCTEX1D4Q5JR98 221 aa4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 SPATA31B1PQ5VZV4 182 aa4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 TMPPEQ6ZT21 453 aa4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 YTHDF3Q7Z739 585 aaKnown RBP4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 TRPT1Q86TN4 253 aaKnown RBP4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 TGIF2LYQ8IUE0 185 aa4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 UBAC2Q8NBM4 344 aa4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 OR1N2Q8NGR9 330 aa4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 OR5J2Q8NH18 312 aa4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 OR9G1Q8NH87 305 aa4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 OR1S1Q8NH92 325 aa4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 DNAJC9Q8WXX5 260 aa4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 RNF185Q96GF1 192 aa4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 PPP1R2P1Q96PQ5 205 aa4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 VPS25Q9BRG1 176 aa4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 RSPO3Q9BXY4 272 aaPredicted RBP4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 SLC17A9Q9BYT1 436 aa4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 PLSCR3Q9NRY6 295 aa4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 ZNF629Q9UEG4 869 aaPredicted RBP4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 NEU3Q9UQ49 428 aa4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 PKIGQ9Y2B9 76 aa4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 ASTN1O14525 1302 aa4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 CLUHO75153 1309 aa4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 MKI67P46013 3256 aaKnown RBP4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 SCN7AQ01118 1682 aa4.6□□□□□ -1.67
CBX1P3-201ENST00000413296 HMGB3O15347 200 aaKnown RBP4.59□□□□□ -1.67
CBX1P3-201ENST00000413296 DLEU1O43261 78 aa4.59□□□□□ -1.67
CBX1P3-201ENST00000413296 CCDC22O60826 627 aa4.59□□□□□ -1.67
CBX1P3-201ENST00000413296 PDCD6O75340 191 aa4.59□□□□□ -1.67
CBX1P3-201ENST00000413296 PROP1O75360 226 aa4.59□□□□□ -1.67
CBX1P3-201ENST00000413296 SPAG7O75391 227 aa4.59□□□□□ -1.67
CBX1P3-201ENST00000413296 SERPINB7O75635 380 aa4.59□□□□□ -1.67
CBX1P3-201ENST00000413296 PFN1P07737 140 aaKnown RBP4.59□□□□□ -1.67
CBX1P3-201ENST00000413296 OR4A8P0C604 315 aa4.59□□□□□ -1.67
CBX1P3-201ENST00000413296 OR56A5P0C7T3 313 aa4.59□□□□□ -1.67
CBX1P3-201ENST00000413296 RAB3BP20337 219 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms