RNA–Protein interactions for RNA: ENST00000409958.6

VSX1-204, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-204ENST00000409958 HTR1DP28221 377 aa16.79■□□□□ 0.28
VSX1-204ENST00000409958 RAG2P55895 527 aa16.79■□□□□ 0.28
VSX1-204ENST00000409958 RPS27AP62979 156 aaKnown RBP16.79■□□□□ 0.28
VSX1-204ENST00000409958 RELBQ01201 579 aa16.79■□□□□ 0.28
VSX1-204ENST00000409958 UNC119Q13432 240 aa16.79■□□□□ 0.28
VSX1-204ENST00000409958 RAB11BQ15907 218 aa16.79■□□□□ 0.28
VSX1-204ENST00000409958 SSX2Q16385 188 aa16.79■□□□□ 0.28
VSX1-204ENST00000409958 GAPTQ8N292 157 aa16.79■□□□□ 0.28
VSX1-204ENST00000409958 OR4F5Q8NH21 305 aa16.79■□□□□ 0.28
VSX1-204ENST00000409958 NDNFQ8TB73 568 aa16.79■□□□□ 0.28
VSX1-204ENST00000409958 TM2D1Q9BX74 207 aa16.79■□□□□ 0.28
VSX1-204ENST00000409958 MMP24Q9Y5R2 645 aa16.79■□□□□ 0.28
VSX1-204ENST00000409958 V9GY05 133 aa16.79■□□□□ 0.28
VSX1-204ENST00000409958 A0A1B0GUS0 222 aa16.78■□□□□ 0.28
VSX1-204ENST00000409958 FAM172BPA6NC97 362 aa16.78■□□□□ 0.28
VSX1-204ENST00000409958 AIPO00170 330 aa16.78■□□□□ 0.28
VSX1-204ENST00000409958 PDCD5O14737 125 aa16.78■□□□□ 0.28
VSX1-204ENST00000409958 ARSBP15848 533 aa16.78■□□□□ 0.28
VSX1-204ENST00000409958 MYL9P24844 172 aa16.78■□□□□ 0.28
VSX1-204ENST00000409958 NFYBP25208 207 aa16.78■□□□□ 0.28
VSX1-204ENST00000409958 CFPP27918 469 aa16.78■□□□□ 0.28
VSX1-204ENST00000409958 SSTR5P35346 364 aa16.78■□□□□ 0.28
VSX1-204ENST00000409958 PRRX1P54821 245 aa16.78■□□□□ 0.28
VSX1-204ENST00000409958 OR2W3Q7Z3T1 314 aa16.78■□□□□ 0.28
VSX1-204ENST00000409958 PIFOQ8TCI5 191 aa16.78■□□□□ 0.28
VSX1-204ENST00000409958 KCNK15Q9H427 330 aa16.78■□□□□ 0.28
VSX1-204ENST00000409958 DPM3Q9P2X0 92 aa16.78■□□□□ 0.28
VSX1-204ENST00000409958 TOR1AO14656 332 aa16.77■□□□□ 0.28
VSX1-204ENST00000409958 P2RY14Q15391 338 aa16.77■□□□□ 0.28
VSX1-204ENST00000409958 FAM189A2Q15884 450 aa16.77■□□□□ 0.28
VSX1-204ENST00000409958 DHRS7BQ6IAN0 325 aaPredicted RBP16.77■□□□□ 0.28
VSX1-204ENST00000409958 OR9G1Q8NH87 305 aa16.77■□□□□ 0.28
VSX1-204ENST00000409958 RFESDQ8TAC1 157 aa16.77■□□□□ 0.28
VSX1-204ENST00000409958 CCDC107Q8WV48 283 aa16.77■□□□□ 0.28
VSX1-204ENST00000409958 CREB3L1Q96BA8 519 aa16.77■□□□□ 0.28
VSX1-204ENST00000409958 NEDD4LQ96PU5 975 aa16.77■□□□□ 0.28
VSX1-204ENST00000409958 HILPDAQ9Y5L2 63 aa16.77■□□□□ 0.28
VSX1-204ENST00000409958 SHISA3A0PJX4 238 aa16.76■□□□□ 0.27
VSX1-204ENST00000409958 POM121CA8CG34 1229 aa16.76■□□□□ 0.27
VSX1-204ENST00000409958 C15orf65H3BRN8 121 aa16.76■□□□□ 0.27
VSX1-204ENST00000409958 RRP9O43818 475 aaKnown RBP16.76■□□□□ 0.27
VSX1-204ENST00000409958 ORC5O43913 435 aa16.76■□□□□ 0.27
VSX1-204ENST00000409958 MDKP21741 143 aaPredicted RBP16.76■□□□□ 0.27
VSX1-204ENST00000409958 CHATP28329 748 aa16.76■□□□□ 0.27
VSX1-204ENST00000409958 FGF9P31371 208 aaPredicted RBP16.76■□□□□ 0.27
VSX1-204ENST00000409958 DYNLT3P51808 116 aa16.76■□□□□ 0.27
VSX1-204ENST00000409958 LY6EQ16553 131 aa16.76■□□□□ 0.27
VSX1-204ENST00000409958 HLA-DRB5Q30154 266 aa16.76■□□□□ 0.27
VSX1-204ENST00000409958 PLA1AQ53H76 456 aa16.76■□□□□ 0.27
VSX1-204ENST00000409958 SYT6Q5T7P8 510 aaPredicted RBP16.76■□□□□ 0.27
VSX1-204ENST00000409958 C22orf42Q6IC83 251 aa16.76■□□□□ 0.27
VSX1-204ENST00000409958 LIAT1Q6ZQX7 453 aa16.76■□□□□ 0.27
VSX1-204ENST00000409958 SLC16A12Q6ZSM3 486 aa16.76■□□□□ 0.27
VSX1-204ENST00000409958 ARL11Q969Q4 196 aa16.76■□□□□ 0.27
VSX1-204ENST00000409958 URM1Q9BTM9 101 aaKnown RBP16.76■□□□□ 0.27
VSX1-204ENST00000409958 BEX1Q9HBH7 125 aa16.76■□□□□ 0.27
VSX1-204ENST00000409958 ABCB10Q9NRK6 738 aa16.76■□□□□ 0.27
VSX1-204ENST00000409958 FBLN5Q9UBX5 448 aa16.76■□□□□ 0.27
VSX1-204ENST00000409958 TRAPPC2LQ9UL33 140 aa16.76■□□□□ 0.27
VSX1-204ENST00000409958 STUB1Q9UNE7 303 aa16.76■□□□□ 0.27
VSX1-204ENST00000409958 UBE2QL1A1L167 161 aa16.75■□□□□ 0.27
VSX1-204ENST00000409958 LEUTXA8MZ59 168 aa16.75■□□□□ 0.27
VSX1-204ENST00000409958 BUB1B-PAK6H3BSN5 160 aa16.75■□□□□ 0.27
VSX1-204ENST00000409958 LTC4SQ16873 150 aa16.75■□□□□ 0.27
VSX1-204ENST00000409958 NKAPLQ5M9Q1 402 aa16.75■□□□□ 0.27
VSX1-204ENST00000409958 UTF1Q5T230 341 aa16.75■□□□□ 0.27
VSX1-204ENST00000409958 OR51D1Q8NGF3 324 aa16.75■□□□□ 0.27
VSX1-204ENST00000409958 FAM3DQ96BQ1 224 aa16.75■□□□□ 0.27
VSX1-204ENST00000409958 NICN1Q9BSH3 213 aa16.75■□□□□ 0.27
VSX1-204ENST00000409958 ZNF747Q9BV97 191 aa16.75■□□□□ 0.27
VSX1-204ENST00000409958 LPAR5Q9H1C0 372 aa16.75■□□□□ 0.27
VSX1-204ENST00000409958 RAB18Q9NP72 206 aa16.75■□□□□ 0.27
VSX1-204ENST00000409958 STEAP1Q9UHE8 339 aa16.75■□□□□ 0.27
VSX1-204ENST00000409958 RAB3BP20337 219 aa16.74■□□□□ 0.27
VSX1-204ENST00000409958 CEACAM3P40198 252 aa16.74■□□□□ 0.27
VSX1-204ENST00000409958 CLDN12P56749 244 aa16.74■□□□□ 0.27
VSX1-204ENST00000409958 C6orf183Q5T699 404 aa16.74■□□□□ 0.27
VSX1-204ENST00000409958 TRAT1Q6PIZ9 186 aa16.74■□□□□ 0.27
VSX1-204ENST00000409958 OR52M1Q8NGK5 317 aa16.74■□□□□ 0.27
VSX1-204ENST00000409958 OR4K15Q8NH41 348 aa16.74■□□□□ 0.27
VSX1-204ENST00000409958 MMP28Q9H239 520 aa16.74■□□□□ 0.27
VSX1-204ENST00000409958 RAB9BQ9NP90 201 aa16.74■□□□□ 0.27
VSX1-204ENST00000409958 TXNL4BQ9NX01 149 aaKnown RBP16.74■□□□□ 0.27
VSX1-204ENST00000409958 PSG11Q9UQ72 335 aa16.74■□□□□ 0.27
VSX1-204ENST00000409958 TCF19Q9Y242 345 aa16.74■□□□□ 0.27
VSX1-204ENST00000409958 CLPSL1A2RUU4 121 aa16.73■□□□□ 0.27
VSX1-204ENST00000409958 J3QR06 171 aa16.73■□□□□ 0.27
VSX1-204ENST00000409958 TSPAN9O75954 239 aa16.73■□□□□ 0.27
VSX1-204ENST00000409958 TNFAIP8O95379 198 aa16.73■□□□□ 0.27
VSX1-204ENST00000409958 BLVRBP30043 206 aaPredicted RBP16.73■□□□□ 0.27
VSX1-204ENST00000409958 RAB13P51153 203 aa16.73■□□□□ 0.27
VSX1-204ENST00000409958 OR10A3P58181 314 aa16.73■□□□□ 0.27
VSX1-204ENST00000409958 NEDD8Q15843 81 aa16.73■□□□□ 0.27
VSX1-204ENST00000409958 C2orf76Q3KRA6 126 aa16.73■□□□□ 0.27
VSX1-204ENST00000409958 HES5Q5TA89 166 aa16.73■□□□□ 0.27
VSX1-204ENST00000409958 Q6ZSV7 163 aa16.73■□□□□ 0.27
VSX1-204ENST00000409958 C6orf201Q7Z4U5 140 aa16.73■□□□□ 0.27
VSX1-204ENST00000409958 FAM89BQ8N5H3 189 aa16.73■□□□□ 0.27
VSX1-204ENST00000409958 LEAP2Q969E1 77 aa16.73■□□□□ 0.27
VSX1-204ENST00000409958 CYYR1Q96J86 154 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms