RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 RSPO3Q9BXY4 272 aaPredicted RBP2.79□□□□□ -1.96
TDP1-207ENST00000553617 ABCG5Q9H222 651 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 SRMSQ9H3Y6 488 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 FBXL15Q9H469 300 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 OR12D3Q9UGF7 316 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.79□□□□□ -1.96
TDP1-207ENST00000553617 CROCCQ5TZA2 2017 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 COL22A1Q8NFW1 1626 aaPredicted RBP2.79□□□□□ -1.96
TDP1-207ENST00000553617 RB1CC1Q8TDY2 1594 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 VPS8Q8N3P4 1428 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 RIMS2Q9UQ26 1411 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 A0A1W2PP64 1363 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 MTCL1Q9Y4B5 1905 aaKnown RBP2.78□□□□□ -1.96
TDP1-207ENST00000553617 ASTN1O14525 1302 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 VIRMAQ69YN4 1812 aaKnown RBP2.78□□□□□ -1.96
TDP1-207ENST00000553617 IGKV1D-13A0A0B4J2D9 117 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 MAP1LC3B2A6NCE7 125 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 OR5H14A6NHG9 310 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 ZFP92A6NM28 416 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 ZNF726A6NNF4 738 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 IGF2P01344 180 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 CRYGDP07320 174 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 CSF3P09919 207 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 TSPAN19P0C672 248 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 IGKV1-13P0DP09 117 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 SPI1P17947 270 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 FMO3P31513 532 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 BTCP35070 178 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 CDKN2BP42772 138 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 OR1E2P47887 323 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 REG1BP48304 166 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 FABP6P51161 128 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 RORCP51449 518 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 ZNF133P52736 654 aaPredicted RBP2.78□□□□□ -1.96
TDP1-207ENST00000553617 SUB1P53999 127 aaKnown RBP eCLIP2.78□□□□□ -1.96
TDP1-207ENST00000553617 APOC4P55056 127 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 WNT4P56705 351 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 PIGPP57054 158 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 TAS2R43P59537 309 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 TAS2R19P59542 299 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 RRAS2P62070 204 aaPredicted RBP2.78□□□□□ -1.96
TDP1-207ENST00000553617 RPL18AQ02543 176 aaKnown RBP2.78□□□□□ -1.96
TDP1-207ENST00000553617 ZNF92Q03936 586 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 TCP10Q12799 353 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 BIKQ13323 160 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 PMVKQ15126 192 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 ZNF630Q2M218 657 aaPredicted RBP2.78□□□□□ -1.96
TDP1-207ENST00000553617 TFDP3Q5H9I0 405 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 SFXN4Q6P4A7 337 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 DCUN1D2Q6PH85 259 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 TOMM20LQ6UXN7 152 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 TMPPEQ6ZT21 453 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 TMEM150AQ86TG1 271 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 RAB43Q86YS6 212 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 DAW1Q8N136 415 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 SLC35F6Q8N357 371 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 TMEM86BQ8N661 226 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 CD177Q8N6Q3 437 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 UBAC2Q8NBM4 344 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 OR4D11Q8NGI4 311 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 OR13C4Q8NGS5 318 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 NEIL3Q8TAT5 605 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 GNPDA2Q8TDQ7 276 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 SLC37A2Q8TED4 501 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 ARPC1AQ92747 370 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 CLDN23Q96B33 292 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 PPCDCQ96CD2 204 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 DCUN1D1Q96GG9 259 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 DIRAS2Q96HU8 199 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 FCRL1Q96LA6 429 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 PPP3R2Q96LZ3 170 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 COL21A1Q96P44 957 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 ZNF382Q96SR6 550 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 SLC25A39Q9BZJ4 359 aaPredicted RBP2.78□□□□□ -1.96
TDP1-207ENST00000553617 TBL1XR1Q9BZK7 514 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 MAP1LC3BQ9GZQ8 125 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 COA1Q9GZY4 146 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 VSIRQ9H7M9 311 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 KCNJ16Q9NPI9 418 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 IDI2-AS1Q9NZ38 188 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 GLS2Q9UI32 602 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 CARHSP1Q9Y2V2 147 aaKnown RBP2.78□□□□□ -1.96
TDP1-207ENST00000553617 WSB1Q9Y6I7 421 aa2.78□□□□□ -1.96
TDP1-207ENST00000553617 MYH3P11055 1940 aa2.78□□□□□ -1.97
TDP1-207ENST00000553617 ZNFX1Q9P2E3 1918 aaKnown RBP2.78□□□□□ -1.97
TDP1-207ENST00000553617 A2MP01023 1474 aa2.77□□□□□ -1.97
TDP1-207ENST00000553617 NCOA1Q15788 1441 aa2.77□□□□□ -1.97
TDP1-207ENST00000553617 SETD5Q9C0A6 1442 aa2.77□□□□□ -1.97
TDP1-207ENST00000553617 IGHV2OR16-5A0A0B4J2B6 119 aa2.77□□□□□ -1.97
TDP1-207ENST00000553617 A0A0J9YXY3 114 aa2.77□□□□□ -1.97
TDP1-207ENST00000553617 A0A1W2PRE2 83 aa2.77□□□□□ -1.97
TDP1-207ENST00000553617 K7ERU9 68 aa2.77□□□□□ -1.97
TDP1-207ENST00000553617 FAAHO00519 579 aa2.77□□□□□ -1.97
TDP1-207ENST00000553617 TP53I11O14683 189 aa2.77□□□□□ -1.97
TDP1-207ENST00000553617 HMGB3O15347 200 aaKnown RBP2.77□□□□□ -1.97
TDP1-207ENST00000553617 TCF21O43680 179 aa2.77□□□□□ -1.97
TDP1-207ENST00000553617 MFSD11O43934 449 aa2.77□□□□□ -1.97
TDP1-207ENST00000553617 ICOSLGO75144 302 aa2.77□□□□□ -1.97
TDP1-207ENST00000553617 GGCTO75223 188 aaKnown RBP2.77□□□□□ -1.97
TDP1-207ENST00000553617 STK16O75716 305 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms