RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 PXT1Q8NFP0 134 aa10.52□□□□□ -0.73
TSC2-220ENST00000568238 OR13F1Q8NGS4 319 aa10.52□□□□□ -0.73
TSC2-220ENST00000568238 OR5R1Q8NH85 324 aa10.52□□□□□ -0.73
TSC2-220ENST00000568238 LINC01006Q8NI28 216 aa10.52□□□□□ -0.73
TSC2-220ENST00000568238 CITED1Q99966 193 aa10.52□□□□□ -0.73
TSC2-220ENST00000568238 UQCC2Q9BRT2 126 aa10.52□□□□□ -0.73
TSC2-220ENST00000568238 METTL9Q9H1A3 318 aa10.52□□□□□ -0.73
TSC2-220ENST00000568238 HMG20AQ9NP66 347 aa10.52□□□□□ -0.73
TSC2-220ENST00000568238 C19orf12Q9NSK7 152 aa10.52□□□□□ -0.73
TSC2-220ENST00000568238 GSTK1Q9Y2Q3 226 aa10.52□□□□□ -0.73
TSC2-220ENST00000568238 TRAV1-2A0A0B4J238 106 aa10.51□□□□□ -0.73
TSC2-220ENST00000568238 A0A1W2PPH5 198 aa10.51□□□□□ -0.73
TSC2-220ENST00000568238 AIREO43918 545 aa10.51□□□□□ -0.73
TSC2-220ENST00000568238 HAND1O96004 215 aa10.51□□□□□ -0.73
TSC2-220ENST00000568238 SERPINA2P20848 420 aa10.51□□□□□ -0.73
TSC2-220ENST00000568238 FGF9P31371 208 aaPredicted RBP10.51□□□□□ -0.73
TSC2-220ENST00000568238 MTNR1BP49286 362 aa10.51□□□□□ -0.73
TSC2-220ENST00000568238 OR10A3P58181 314 aa10.51□□□□□ -0.73
TSC2-220ENST00000568238 LSM3P62310 102 aaKnown RBP10.51□□□□□ -0.73
TSC2-220ENST00000568238 RPL31P62899 125 aaKnown RBP10.51□□□□□ -0.73
TSC2-220ENST00000568238 P2RY14Q15391 338 aa10.51□□□□□ -0.73
TSC2-220ENST00000568238 TIMM50Q3ZCQ8 353 aa10.51□□□□□ -0.73
TSC2-220ENST00000568238 ASCL4Q6XD76 172 aa10.51□□□□□ -0.73
TSC2-220ENST00000568238 FOXRED1Q96CU9 486 aaPredicted RBP10.51□□□□□ -0.73
TSC2-220ENST00000568238 CENPOQ9BU64 300 aa10.51□□□□□ -0.73
TSC2-220ENST00000568238 PLGRKTQ9HBL7 147 aa10.51□□□□□ -0.73
TSC2-220ENST00000568238 A0A1W2PP11 408 aa10.5□□□□□ -0.73
TSC2-220ENST00000568238 M0QZ24 198 aa10.5□□□□□ -0.73
TSC2-220ENST00000568238 SIRPB1O00241 398 aa10.5□□□□□ -0.73
TSC2-220ENST00000568238 PDCD5O14737 125 aa10.5□□□□□ -0.73
TSC2-220ENST00000568238 CSTBP04080 98 aaKnown RBP10.5□□□□□ -0.73
TSC2-220ENST00000568238 TFAP2AP05549 437 aa10.5□□□□□ -0.73
TSC2-220ENST00000568238 HTR2CP28335 458 aa10.5□□□□□ -0.73
TSC2-220ENST00000568238 ALDH3B2P48448 385 aa10.5□□□□□ -0.73
TSC2-220ENST00000568238 BMXP51813 675 aa10.5□□□□□ -0.73
TSC2-220ENST00000568238 PROK1P58294 105 aa10.5□□□□□ -0.73
TSC2-220ENST00000568238 COL10A1Q03692 680 aa10.5□□□□□ -0.73
TSC2-220ENST00000568238 SCN1BQ07699 218 aa10.5□□□□□ -0.73
TSC2-220ENST00000568238 RAB11BQ15907 218 aa10.5□□□□□ -0.73
TSC2-220ENST00000568238 PIGYQ3MUY2 71 aa10.5□□□□□ -0.73
TSC2-220ENST00000568238 MIDNQ504T8 468 aa10.5□□□□□ -0.73
TSC2-220ENST00000568238 SPIN3Q5JUX0 258 aa10.5□□□□□ -0.73
TSC2-220ENST00000568238 C1orf100Q5SVJ3 147 aa10.5□□□□□ -0.73
TSC2-220ENST00000568238 HCP5Q6MZN7 132 aa10.5□□□□□ -0.73
TSC2-220ENST00000568238 Q6ZSV7 163 aa10.5□□□□□ -0.73
TSC2-220ENST00000568238 GPR141Q7Z602 305 aa10.5□□□□□ -0.73
TSC2-220ENST00000568238 ASCC1Q8N9N2 400 aaKnown RBP10.5□□□□□ -0.73
TSC2-220ENST00000568238 BEND2Q8NDZ0 799 aa10.5□□□□□ -0.73
TSC2-220ENST00000568238 OR6M1Q8NGM8 313 aa10.5□□□□□ -0.73
TSC2-220ENST00000568238 FAM46BQ96A09 425 aa10.5□□□□□ -0.73
TSC2-220ENST00000568238 KCTD7Q96MP8 289 aa10.5□□□□□ -0.73
TSC2-220ENST00000568238 FUNDC2Q9BWH2 189 aa10.5□□□□□ -0.73
TSC2-220ENST00000568238 KCNK15Q9H427 330 aa10.5□□□□□ -0.73
TSC2-220ENST00000568238 RHOFQ9HBH0 211 aa10.5□□□□□ -0.73
TSC2-220ENST00000568238 IL36GQ9NZH8 169 aa10.5□□□□□ -0.73
TSC2-220ENST00000568238 hCG_1809904A0A1W2PP81 198 aa10.49□□□□□ -0.73
TSC2-220ENST00000568238 A0A1W2PPE2 198 aa10.49□□□□□ -0.73
TSC2-220ENST00000568238 A0A1W2PR64 198 aa10.49□□□□□ -0.73
TSC2-220ENST00000568238 A0A1W2PRV1 198 aa10.49□□□□□ -0.73
TSC2-220ENST00000568238 H3BUX3 64 aa10.49□□□□□ -0.73
TSC2-220ENST00000568238 SLC17A2O00624 439 aa10.49□□□□□ -0.73
TSC2-220ENST00000568238 TIMM23O14925 209 aa10.49□□□□□ -0.73
TSC2-220ENST00000568238 SLC22A1O15245 554 aa10.49□□□□□ -0.73
TSC2-220ENST00000568238 CRTAPO75718 401 aaPredicted RBP10.49□□□□□ -0.73
TSC2-220ENST00000568238 CLPXO76031 633 aa10.49□□□□□ -0.73
TSC2-220ENST00000568238 RAB3BP20337 219 aa10.49□□□□□ -0.73
TSC2-220ENST00000568238 GABRR1P24046 479 aa10.49□□□□□ -0.73
TSC2-220ENST00000568238 SDC2P34741 201 aa10.49□□□□□ -0.73
TSC2-220ENST00000568238 TGFBR1P36897 503 aa10.49□□□□□ -0.73
TSC2-220ENST00000568238 CLDN12P56749 244 aa10.49□□□□□ -0.73
TSC2-220ENST00000568238 MXD1Q05195 221 aa10.49□□□□□ -0.73
TSC2-220ENST00000568238 ZNF146Q15072 292 aa10.49□□□□□ -0.73
TSC2-220ENST00000568238 HES5Q5TA89 166 aa10.49□□□□□ -0.73
TSC2-220ENST00000568238 ELP2Q6IA86 826 aa10.49□□□□□ -0.73
TSC2-220ENST00000568238 NR2C2APQ86WQ0 139 aa10.49□□□□□ -0.73
TSC2-220ENST00000568238 OSR2Q8N2R0 312 aa10.49□□□□□ -0.73
TSC2-220ENST00000568238 TMEM104Q8NE00 496 aa10.49□□□□□ -0.73
TSC2-220ENST00000568238 OR4M1Q8NGD0 313 aa10.49□□□□□ -0.73
TSC2-220ENST00000568238 FAM234AQ9H0X4 552 aa10.49□□□□□ -0.73
TSC2-220ENST00000568238 BANF2Q9H503 90 aa10.49□□□□□ -0.73
TSC2-220ENST00000568238 C16orf95Q9H693 158 aa10.49□□□□□ -0.73
TSC2-220ENST00000568238 GLS2Q9UI32 602 aa10.49□□□□□ -0.73
TSC2-220ENST00000568238 SCOCQ9UIL1 159 aa10.49□□□□□ -0.73
TSC2-220ENST00000568238 V9GY05 133 aa10.49□□□□□ -0.73
TSC2-220ENST00000568238 TET2Q6N021 2002 aaPredicted RBP10.48□□□□□ -0.73
TSC2-220ENST00000568238 HSPB6O14558 160 aa10.48□□□□□ -0.73
TSC2-220ENST00000568238 SH2D1BO14796 132 aa10.48□□□□□ -0.73
TSC2-220ENST00000568238 KCNAB3O43448 404 aa10.48□□□□□ -0.73
TSC2-220ENST00000568238 ZNF780AO75290 641 aaPredicted RBP10.48□□□□□ -0.73
TSC2-220ENST00000568238 OR2H2O95918 312 aa10.48□□□□□ -0.73
TSC2-220ENST00000568238 TK1P04183 234 aa10.48□□□□□ -0.73
TSC2-220ENST00000568238 CHRM2P08172 466 aa10.48□□□□□ -0.73
TSC2-220ENST00000568238 CLEC2LP0C7M8 214 aa10.48□□□□□ -0.73
TSC2-220ENST00000568238 UBBP0CG47 229 aa10.48□□□□□ -0.73
TSC2-220ENST00000568238 GTF2F2P13984 249 aa10.48□□□□□ -0.73
TSC2-220ENST00000568238 ZNF44P15621 663 aa10.48□□□□□ -0.73
TSC2-220ENST00000568238 RBM11P57052 281 aaKnown RBP10.48□□□□□ -0.73
TSC2-220ENST00000568238 KRTAP10-3P60369 221 aa10.48□□□□□ -0.73
TSC2-220ENST00000568238 GPR176Q14439 515 aa10.48□□□□□ -0.73
TSC2-220ENST00000568238 LRRC75BQ2VPJ9 315 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms