RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 PWWP2BQ6NUJ5 590 aa9.9□□□□□ -0.82
SCN4A-201ENST00000435607 ZG16BQ96DA0 208 aa9.9□□□□□ -0.82
SCN4A-201ENST00000435607 OR2A7Q96R45 310 aa9.9□□□□□ -0.82
SCN4A-201ENST00000435607 LAMB4A4D0S4 1761 aa9.9□□□□□ -0.82
SCN4A-201ENST00000435607 CST2P09228 141 aa9.9□□□□□ -0.83
SCN4A-201ENST00000435607 INHBBP09529 407 aa9.9□□□□□ -0.83
SCN4A-201ENST00000435607 SLC37A1P57057 533 aa9.9□□□□□ -0.83
SCN4A-201ENST00000435607 SPINK9Q5DT21 86 aa9.9□□□□□ -0.83
SCN4A-201ENST00000435607 UQCC3Q6UW78 93 aa9.9□□□□□ -0.83
SCN4A-201ENST00000435607 PTX4Q96A99 478 aa9.9□□□□□ -0.83
SCN4A-201ENST00000435607 MMP25Q9NPA2 562 aa9.9□□□□□ -0.83
SCN4A-201ENST00000435607 A0A0A6YYJ9 748 aa9.9□□□□□ -0.83
SCN4A-201ENST00000435607 NDUFA2O43678 99 aa9.9□□□□□ -0.83
SCN4A-201ENST00000435607 B4GALT3O60512 393 aa9.9□□□□□ -0.83
SCN4A-201ENST00000435607 MMP15P51511 669 aa9.9□□□□□ -0.83
SCN4A-201ENST00000435607 MIDNQ504T8 468 aa9.9□□□□□ -0.83
SCN4A-201ENST00000435607 Q6ZNB5 142 aa9.9□□□□□ -0.83
SCN4A-201ENST00000435607 ANAPC16Q96DE5 110 aa9.9□□□□□ -0.83
SCN4A-201ENST00000435607 SNX22Q96L94 193 aa9.9□□□□□ -0.83
SCN4A-201ENST00000435607 NUP214P35658 2090 aaPredicted RBP9.89□□□□□ -0.83
SCN4A-201ENST00000435607 CHST1O43916 411 aa9.89□□□□□ -0.83
SCN4A-201ENST00000435607 IGHV3-13P01766 116 aa9.89□□□□□ -0.83
SCN4A-201ENST00000435607 IGHV3-7P01780 117 aa9.89□□□□□ -0.83
SCN4A-201ENST00000435607 MC5RP33032 325 aa9.89□□□□□ -0.83
SCN4A-201ENST00000435607 NKG7Q16617 165 aa9.89□□□□□ -0.83
SCN4A-201ENST00000435607 ZNF383Q8NA42 475 aa9.89□□□□□ -0.83
SCN4A-201ENST00000435607 C20orf27Q9GZN8 174 aa9.89□□□□□ -0.83
SCN4A-201ENST00000435607 CSN3P07498 182 aa9.89□□□□□ -0.83
SCN4A-201ENST00000435607 CCL2P13500 99 aa9.89□□□□□ -0.83
SCN4A-201ENST00000435607 WNT5AP41221 380 aa9.89□□□□□ -0.83
SCN4A-201ENST00000435607 SNRPD3P62318 126 aaKnown RBP9.89□□□□□ -0.83
SCN4A-201ENST00000435607 PSG5Q15238 335 aa9.89□□□□□ -0.83
SCN4A-201ENST00000435607 FGF20Q9NP95 211 aaPredicted RBP9.89□□□□□ -0.83
SCN4A-201ENST00000435607 CCL27Q9Y4X3 112 aa9.89□□□□□ -0.83
SCN4A-201ENST00000435607 TMEM262E9PQX1 116 aa9.89□□□□□ -0.83
SCN4A-201ENST00000435607 IGLV3-27P01718 113 aa9.89□□□□□ -0.83
SCN4A-201ENST00000435607 TTRP02766 147 aa9.89□□□□□ -0.83
SCN4A-201ENST00000435607 CEBPDP49716 269 aaPredicted RBP9.89□□□□□ -0.83
SCN4A-201ENST00000435607 TNFSF10P50591 281 aa9.89□□□□□ -0.83
SCN4A-201ENST00000435607 PRSS12P56730 875 aa9.89□□□□□ -0.83
SCN4A-201ENST00000435607 CACNG7P62955 275 aa9.89□□□□□ -0.83
SCN4A-201ENST00000435607 MRPL58Q14197 206 aaKnown RBP9.89□□□□□ -0.83
SCN4A-201ENST00000435607 SP6Q3SY56 376 aa9.89□□□□□ -0.83
SCN4A-201ENST00000435607 CELF2-AS1Q8N7Q2 184 aa9.89□□□□□ -0.83
SCN4A-201ENST00000435607 GATA6Q92908 595 aa9.89□□□□□ -0.83
SCN4A-201ENST00000435607 GABRB1P18505 474 aa9.89□□□□□ -0.83
SCN4A-201ENST00000435607 GFRA1P56159 465 aa9.89□□□□□ -0.83
SCN4A-201ENST00000435607 TWIST1Q15672 202 aa9.89□□□□□ -0.83
SCN4A-201ENST00000435607 COL13A1Q5TAT6 717 aaPredicted RBP9.89□□□□□ -0.83
SCN4A-201ENST00000435607 C2CD4CQ8TF44 421 aa9.89□□□□□ -0.83
SCN4A-201ENST00000435607 WSB1Q9Y6I7 421 aa9.89□□□□□ -0.83
SCN4A-201ENST00000435607 CLDN34H7C241 214 aa9.89□□□□□ -0.83
SCN4A-201ENST00000435607 CA11O75493 328 aa9.89□□□□□ -0.83
SCN4A-201ENST00000435607 NKX2-2O95096 273 aa9.89□□□□□ -0.83
SCN4A-201ENST00000435607 IL9P15248 144 aa9.89□□□□□ -0.83
SCN4A-201ENST00000435607 LSM6P62312 80 aaKnown RBP9.89□□□□□ -0.83
SCN4A-201ENST00000435607 IL24Q13007 206 aa9.89□□□□□ -0.83
SCN4A-201ENST00000435607 B3GNT9Q6UX72 402 aa9.89□□□□□ -0.83
SCN4A-201ENST00000435607 TMEM37Q8WXS4 190 aa9.89□□□□□ -0.83
SCN4A-201ENST00000435607 K7N7A8 449 aa9.89□□□□□ -0.83
SCN4A-201ENST00000435607 MBPP02686 304 aaPredicted RBP9.89□□□□□ -0.83
SCN4A-201ENST00000435607 JUNBP17275 347 aaPredicted RBP9.89□□□□□ -0.83
SCN4A-201ENST00000435607 GABRA6Q16445 453 aa9.89□□□□□ -0.83
SCN4A-201ENST00000435607 HIST3H3Q16695 136 aa9.89□□□□□ -0.83
SCN4A-201ENST00000435607 MRPL30Q8TCC3 161 aaKnown RBP9.89□□□□□ -0.83
SCN4A-201ENST00000435607 ZNF714Q96N38 554 aa9.89□□□□□ -0.83
SCN4A-201ENST00000435607 RAXQ9Y2V3 346 aa9.89□□□□□ -0.83
SCN4A-201ENST00000435607 CACNA1SQ13698 1873 aa9.89□□□□□ -0.83
SCN4A-201ENST00000435607 INPP5JQ15735 1006 aaPredicted RBP9.88□□□□□ -0.83
SCN4A-201ENST00000435607 C11orf87Q6NUJ2 197 aa9.88□□□□□ -0.83
SCN4A-201ENST00000435607 TMEM38BQ9NVV0 291 aa9.88□□□□□ -0.83
SCN4A-201ENST00000435607 PDFQ9HBH1 243 aa9.88□□□□□ -0.83
SCN4A-201ENST00000435607 EVX1P49640 407 aa9.88□□□□□ -0.83
SCN4A-201ENST00000435607 COMPP49747 757 aaPredicted RBP9.88□□□□□ -0.83
SCN4A-201ENST00000435607 SCAND1P57086 179 aa9.88□□□□□ -0.83
SCN4A-201ENST00000435607 FAM78BQ5VT40 261 aa9.88□□□□□ -0.83
SCN4A-201ENST00000435607 MAMSTRQ6ZN01 415 aa9.88□□□□□ -0.83
SCN4A-201ENST00000435607 TP53I13Q8NBR0 393 aaPredicted RBP9.88□□□□□ -0.83
SCN4A-201ENST00000435607 TDRD6O60522 2096 aaKnown RBP9.88□□□□□ -0.83
SCN4A-201ENST00000435607 SSC5DA1L4H1 1573 aa9.88□□□□□ -0.83
SCN4A-201ENST00000435607 RAB29O14966 203 aa9.88□□□□□ -0.83
SCN4A-201ENST00000435607 GHRHP01286 108 aa9.88□□□□□ -0.83
SCN4A-201ENST00000435607 Q7L0L9 218 aa9.88□□□□□ -0.83
SCN4A-201ENST00000435607 SHPRHQ149N8 1683 aa9.88□□□□□ -0.83
SCN4A-201ENST00000435607 PDCD1Q15116 288 aa9.88□□□□□ -0.83
SCN4A-201ENST00000435607 CLEC9AQ6UXN8 241 aa9.88□□□□□ -0.83
SCN4A-201ENST00000435607 TMEM179BQ7Z7N9 219 aa9.88□□□□□ -0.83
SCN4A-201ENST00000435607 MS4A10Q96PG2 267 aa9.88□□□□□ -0.83
SCN4A-201ENST00000435607 KCNE1BA0A087WTH5 132 aa9.88□□□□□ -0.83
SCN4A-201ENST00000435607 PLPP3O14495 311 aa9.88□□□□□ -0.83
SCN4A-201ENST00000435607 SYNGR1O43759 233 aa9.88□□□□□ -0.83
SCN4A-201ENST00000435607 C6orf201Q7Z4U5 140 aa9.88□□□□□ -0.83
SCN4A-201ENST00000435607 TMEM101Q96IK0 257 aa9.88□□□□□ -0.83
SCN4A-201ENST00000435607 MMP26Q9NRE1 261 aa9.88□□□□□ -0.83
SCN4A-201ENST00000435607 GPR27Q9NS67 375 aa9.88□□□□□ -0.83
SCN4A-201ENST00000435607 MIOXQ9UGB7 285 aa9.88□□□□□ -0.83
SCN4A-201ENST00000435607 MYOM1P52179 1685 aa9.88□□□□□ -0.83
SCN4A-201ENST00000435607 AHRRA9YTQ3 701 aa9.87□□□□□ -0.83
SCN4A-201ENST00000435607 ADRA2AP08913 450 aa9.87□□□□□ -0.83
SCN4A-201ENST00000435607 PGA4P0DJD7 388 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms