RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 SYT4Q9H2B2 425 aa2.15□□□□□ -2.07
VPS41-206ENST00000418457 LINC00597Q9H2U6 94 aa2.15□□□□□ -2.07
VPS41-206ENST00000418457 NCOR1P1Q9H4R4 102 aa2.15□□□□□ -2.07
VPS41-206ENST00000418457 XKR8Q9H6D3 395 aa2.15□□□□□ -2.07
VPS41-206ENST00000418457 KIR3DX1Q9H7L2 352 aa2.15□□□□□ -2.07
VPS41-206ENST00000418457 WDR76Q9H967 626 aa2.15□□□□□ -2.07
VPS41-206ENST00000418457 RHOFQ9HBH0 211 aa2.15□□□□□ -2.07
VPS41-206ENST00000418457 RAB18Q9NP72 206 aa2.15□□□□□ -2.07
VPS41-206ENST00000418457 ADAP2Q9NPF8 381 aa2.15□□□□□ -2.07
VPS41-206ENST00000418457 NIT2Q9NQR4 276 aa2.15□□□□□ -2.07
VPS41-206ENST00000418457 PARP11Q9NR21 331 aa2.15□□□□□ -2.07
VPS41-206ENST00000418457 CTSZQ9UBR2 303 aa2.15□□□□□ -2.07
VPS41-206ENST00000418457 LAMP5Q9UJQ1 280 aa2.15□□□□□ -2.07
VPS41-206ENST00000418457 PILRAQ9UKJ1 303 aa2.15□□□□□ -2.07
VPS41-206ENST00000418457 KLK13Q9UKR3 277 aa2.15□□□□□ -2.07
VPS41-206ENST00000418457 STRAPQ9Y3F4 350 aaKnown RBP2.15□□□□□ -2.07
VPS41-206ENST00000418457 IER3IP1Q9Y5U9 82 aa2.15□□□□□ -2.07
VPS41-206ENST00000418457 KCNE3Q9Y6H6 103 aa2.15□□□□□ -2.07
VPS41-206ENST00000418457 LTBP2Q14767 1821 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 A0A0C4DFX4 3053 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 MUC3AQ02505 3323 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 SCN3AQ9NY46 2000 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 BORCS7-ASMTA0A0B4J1R7 106 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 IGKV1-8A0A0C4DH67 115 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 A0A0G2JN53 185 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.14□□□□□ -2.07
VPS41-206ENST00000418457 A0A1B0GW64 132 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.14□□□□□ -2.07
VPS41-206ENST00000418457 TMEM72A0PK05 275 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 C5orf51A6NDU8 294 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 BTBD17A6NE02 478 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 SERINC4A6NH21 518 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 COLCA2A8K830 154 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 CYSRT1A8MQ03 144 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 ZNF705EA8MWA4 302 aaPredicted RBP2.14□□□□□ -2.07
VPS41-206ENST00000418457 LINC00587B1AMM8 73 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 IDSB3KWA1 339 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 C4orf51C9J302 202 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 H0YIG0 161 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 RNASEK-C17orf49H0YIS7 233 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 MBTPS2O43462 519 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 GMFGO60234 142 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 STK17BO94768 372 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 RPP14O95059 124 aaKnown RBP2.14□□□□□ -2.07
VPS41-206ENST00000418457 GOSR1O95249 250 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 SFT2D2O95562 160 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 GPR75O95800 540 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 ACTL6AO96019 429 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 CST4P01036 141 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 IGHV3-13P01766 116 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 IGHV2-5P01817 119 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 MAS1P04201 325 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 IFNA6P05013 189 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 ISG15P05161 165 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 GYPBP06028 91 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 CD5P06127 495 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 DCNP07585 359 aaKnown RBP2.14□□□□□ -2.07
VPS41-206ENST00000418457 ERCC1P07992 297 aaPredicted RBP2.14□□□□□ -2.07
VPS41-206ENST00000418457 FCGR3AP08637 254 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 SFTA3P0C7M3 94 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 SEC11BP0C7V7 166 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 ZNF735P0CB33 412 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 SLC35E2P0CK97 266 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 OR8G3PP0DMU2 310 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 SMIM10L1P0DMW3 83 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 PGAM2P15259 253 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 IGFBP3P17936 291 aaPredicted RBP2.14□□□□□ -2.07
VPS41-206ENST00000418457 FUT1P19526 365 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 ALOX5APP20292 161 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 CXCR1P25024 350 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 S100A2P29034 98 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 MAS1LP35410 378 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 ACAA2P42765 397 aaKnown RBP2.14□□□□□ -2.07
VPS41-206ENST00000418457 SLC6A8P48029 635 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 KCNJ3P48549 501 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 SULT1A2P50226 295 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 SUCLG1P53597 346 aaKnown RBP2.14□□□□□ -2.07
VPS41-206ENST00000418457 ATP1B3P54709 279 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 NDUFV3P56181 108 aaKnown RBP2.14□□□□□ -2.07
VPS41-206ENST00000418457 CLDN12P56749 244 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 KRTAP10-7P60409 375 aaPredicted RBP2.14□□□□□ -2.07
VPS41-206ENST00000418457 RPS15P62841 145 aaKnown RBP2.14□□□□□ -2.07
VPS41-206ENST00000418457 SKP1P63208 163 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 BTN3A2P78410 334 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 FAM3AP98173 230 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 DEFA6Q01524 100 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 SRSF5Q13243 272 aaKnown RBP2.14□□□□□ -2.07
VPS41-206ENST00000418457 EIF3IQ13347 325 aaKnown RBP2.14□□□□□ -2.07
VPS41-206ENST00000418457 TOMM34Q15785 309 aaPredicted RBP2.14□□□□□ -2.07
VPS41-206ENST00000418457 C3AR1Q16581 482 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 ZNF674Q2M3X9 581 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 HNRNPA1L2Q32P51 320 aaKnown RBP2.14□□□□□ -2.07
VPS41-206ENST00000418457 C2orf76Q3KRA6 126 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 Q3ZCU0 254 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 SCGB2B2Q4G0G5 96 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 TMEM128Q5BJH2 165 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 VAX1Q5SQQ9 334 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 C1orf100Q5SVJ3 147 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 LINC01590Q5TEZ4 76 aa2.14□□□□□ -2.07
VPS41-206ENST00000418457 TMEM215Q68D42 235 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms