RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 C11orf91Q3C1V1 193 aa10.44□□□□□ -0.74
LINC00339-202ENST00000416769 GLT8D1Q68CQ7 371 aa10.44□□□□□ -0.74
LINC00339-202ENST00000416769 CCBE1Q6UXH8 406 aaPredicted RBP10.44□□□□□ -0.74
LINC00339-202ENST00000416769 ZNF573Q86YE8 665 aa10.44□□□□□ -0.74
LINC00339-202ENST00000416769 FAM185AQ8N0U4 392 aa10.44□□□□□ -0.74
LINC00339-202ENST00000416769 OR52N4Q8NGI2 321 aa10.44□□□□□ -0.74
LINC00339-202ENST00000416769 OR51A2Q8NGJ7 313 aa10.44□□□□□ -0.74
LINC00339-202ENST00000416769 OR4C13Q8NGP0 309 aa10.44□□□□□ -0.74
LINC00339-202ENST00000416769 C12orf43Q96C57 262 aaKnown RBP10.44□□□□□ -0.74
LINC00339-202ENST00000416769 FOXRED1Q96CU9 486 aaPredicted RBP10.44□□□□□ -0.74
LINC00339-202ENST00000416769 CPNE2Q96FN4 548 aaPredicted RBP10.44□□□□□ -0.74
LINC00339-202ENST00000416769 NAA50Q9GZZ1 169 aaKnown RBP10.44□□□□□ -0.74
LINC00339-202ENST00000416769 OR51I2Q9H344 312 aa10.44□□□□□ -0.74
LINC00339-202ENST00000416769 RNF167Q9H6Y7 350 aa10.44□□□□□ -0.74
LINC00339-202ENST00000416769 METTL8Q9H825 291 aaKnown RBP10.44□□□□□ -0.74
LINC00339-202ENST00000416769 ZNF222Q9UK12 451 aa10.44□□□□□ -0.74
LINC00339-202ENST00000416769 CEPT1Q9Y6K0 416 aa10.44□□□□□ -0.74
LINC00339-202ENST00000416769 NKX6-3A6NJ46 265 aa10.43□□□□□ -0.74
LINC00339-202ENST00000416769 M0R1W7 72 aa10.43□□□□□ -0.74
LINC00339-202ENST00000416769 CCL3L1P16619 93 aa10.43□□□□□ -0.74
LINC00339-202ENST00000416769 GABRA2P47869 451 aa10.43□□□□□ -0.74
LINC00339-202ENST00000416769 MTCP1P56278 107 aa10.43□□□□□ -0.74
LINC00339-202ENST00000416769 LSM3P62310 102 aaKnown RBP10.43□□□□□ -0.74
LINC00339-202ENST00000416769 KISS1Q15726 138 aa10.43□□□□□ -0.74
LINC00339-202ENST00000416769 CTF1Q16619 201 aa10.43□□□□□ -0.74
LINC00339-202ENST00000416769 LDLRAD2Q5SZI1 272 aa10.43□□□□□ -0.74
LINC00339-202ENST00000416769 TMEM219Q86XT9 240 aa10.43□□□□□ -0.74
LINC00339-202ENST00000416769 LYPD6Q86Y78 171 aa10.43□□□□□ -0.74
LINC00339-202ENST00000416769 BATF2Q8N1L9 274 aa10.43□□□□□ -0.74
LINC00339-202ENST00000416769 C11orf42Q8N5U0 333 aa10.43□□□□□ -0.74
LINC00339-202ENST00000416769 NKAIN3Q8N8D7 197 aa10.43□□□□□ -0.74
LINC00339-202ENST00000416769 TMEM185AQ8NFB2 350 aa10.43□□□□□ -0.74
LINC00339-202ENST00000416769 OR2T6Q8NHC8 308 aa10.43□□□□□ -0.74
LINC00339-202ENST00000416769 TRMT10AQ8TBZ6 339 aaKnown RBP10.43□□□□□ -0.74
LINC00339-202ENST00000416769 RAB2BQ8WUD1 216 aa10.43□□□□□ -0.74
LINC00339-202ENST00000416769 ZNF488Q96MN9 340 aa10.43□□□□□ -0.74
LINC00339-202ENST00000416769 CITED2Q99967 270 aaPredicted RBP10.43□□□□□ -0.74
LINC00339-202ENST00000416769 NLKQ9UBE8 527 aa10.43□□□□□ -0.74
LINC00339-202ENST00000416769 COL7A1Q02388 2944 aa10.43□□□□□ -0.74
LINC00339-202ENST00000416769 IGKV1-27A0A075B6S5 117 aa10.42□□□□□ -0.74
LINC00339-202ENST00000416769 SMIM31A0A1B0GVY4 71 aa10.42□□□□□ -0.74
LINC00339-202ENST00000416769 SHISA3A0PJX4 238 aa10.42□□□□□ -0.74
LINC00339-202ENST00000416769 DPPA5A6NC42 116 aa10.42□□□□□ -0.74
LINC00339-202ENST00000416769 OR2AT4A6NND4 320 aa10.42□□□□□ -0.74
LINC00339-202ENST00000416769 ACAA1P09110 424 aaPredicted RBP10.42□□□□□ -0.74
LINC00339-202ENST00000416769 VSIG8P0DPA2 414 aa10.42□□□□□ -0.74
LINC00339-202ENST00000416769 PSG2P11465 335 aa10.42□□□□□ -0.74
LINC00339-202ENST00000416769 IGLL1P15814 213 aa10.42□□□□□ -0.74
LINC00339-202ENST00000416769 RAB3BP20337 219 aa10.42□□□□□ -0.74
LINC00339-202ENST00000416769 SDC2P34741 201 aa10.42□□□□□ -0.74
LINC00339-202ENST00000416769 ZNF93P35789 620 aaPredicted RBP10.42□□□□□ -0.74
LINC00339-202ENST00000416769 RANBP1P43487 201 aa10.42□□□□□ -0.74
LINC00339-202ENST00000416769 HAAOP46952 286 aa10.42□□□□□ -0.74
LINC00339-202ENST00000416769 VBP1P61758 197 aa10.42□□□□□ -0.74
LINC00339-202ENST00000416769 DDI2Q5TDH0 399 aa10.42□□□□□ -0.74
LINC00339-202ENST00000416769 FOXB2Q5VYV0 432 aa10.42□□□□□ -0.74
LINC00339-202ENST00000416769 NCR3LG1Q68D85 454 aa10.42□□□□□ -0.74
LINC00339-202ENST00000416769 ZNF782Q6ZMW2 699 aaPredicted RBP10.42□□□□□ -0.74
LINC00339-202ENST00000416769 ZNF671Q8TAW3 534 aa10.42□□□□□ -0.74
LINC00339-202ENST00000416769 WIPF2Q8TF74 440 aaPredicted RBP10.42□□□□□ -0.74
LINC00339-202ENST00000416769 R3HDM4Q96D70 268 aa10.42□□□□□ -0.74
LINC00339-202ENST00000416769 UQCC2Q9BRT2 126 aa10.42□□□□□ -0.74
LINC00339-202ENST00000416769 PKIBQ9C010 78 aa10.42□□□□□ -0.74
LINC00339-202ENST00000416769 NECAP2Q9NVZ3 263 aa10.42□□□□□ -0.74
LINC00339-202ENST00000416769 AK6Q9Y3D8 172 aaKnown RBP10.42□□□□□ -0.74
LINC00339-202ENST00000416769 V9GY05 133 aa10.42□□□□□ -0.74
LINC00339-202ENST00000416769 A0A1W2PRX2 142 aa10.41□□□□□ -0.74
LINC00339-202ENST00000416769 K7EIL1 84 aa10.41□□□□□ -0.74
LINC00339-202ENST00000416769 ZNF701M0R085 212 aaPredicted RBP10.41□□□□□ -0.74
LINC00339-202ENST00000416769 FBXO24O75426 580 aa10.41□□□□□ -0.74
LINC00339-202ENST00000416769 CDRT1O95170 752 aa10.41□□□□□ -0.74
LINC00339-202ENST00000416769 MPIG6BO95866 241 aa10.41□□□□□ -0.74
LINC00339-202ENST00000416769 IL1AP01583 271 aa10.41□□□□□ -0.74
LINC00339-202ENST00000416769 MPZP25189 248 aa10.41□□□□□ -0.74
LINC00339-202ENST00000416769 CAV3P56539 151 aa10.41□□□□□ -0.74
LINC00339-202ENST00000416769 NCS1P62166 190 aa10.41□□□□□ -0.74
LINC00339-202ENST00000416769 IL24Q13007 206 aa10.41□□□□□ -0.74
LINC00339-202ENST00000416769 PDZK1IP1Q13113 114 aa10.41□□□□□ -0.74
LINC00339-202ENST00000416769 ZNF273Q14593 569 aa10.41□□□□□ -0.74
LINC00339-202ENST00000416769 C1orf100Q5SVJ3 147 aa10.41□□□□□ -0.74
LINC00339-202ENST00000416769 RNF144BQ7Z419 303 aa10.41□□□□□ -0.74
LINC00339-202ENST00000416769 ANGPTL5Q86XS5 388 aa10.41□□□□□ -0.74
LINC00339-202ENST00000416769 CD177Q8N6Q3 437 aa10.41□□□□□ -0.74
LINC00339-202ENST00000416769 OR4M1Q8NGD0 313 aa10.41□□□□□ -0.74
LINC00339-202ENST00000416769 OR10Z1Q8NGY1 313 aa10.41□□□□□ -0.74
LINC00339-202ENST00000416769 AQP3Q92482 292 aa10.41□□□□□ -0.74
LINC00339-202ENST00000416769 DGCR14Q96DF8 476 aaKnown RBP10.41□□□□□ -0.74
LINC00339-202ENST00000416769 SPACA5Q96QH8 159 aa10.41□□□□□ -0.74
LINC00339-202ENST00000416769 GPER1Q99527 375 aa10.41□□□□□ -0.74
LINC00339-202ENST00000416769 GFI1Q99684 422 aa10.41□□□□□ -0.74
LINC00339-202ENST00000416769 RBM38Q9H0Z9 239 aaKnown RBP10.41□□□□□ -0.74
LINC00339-202ENST00000416769 MEGF9Q9H1U4 602 aa10.41□□□□□ -0.74
LINC00339-202ENST00000416769 BATF3Q9NR55 127 aa10.41□□□□□ -0.74
LINC00339-202ENST00000416769 A6NHS1 94 aa10.4□□□□□ -0.74
LINC00339-202ENST00000416769 J3QT63 122 aa10.4□□□□□ -0.74
LINC00339-202ENST00000416769 SLC22A1O15245 554 aa10.4□□□□□ -0.74
LINC00339-202ENST00000416769 NOL3O60936 208 aaKnown RBP10.4□□□□□ -0.74
LINC00339-202ENST00000416769 TMEM127O75204 238 aa10.4□□□□□ -0.74
LINC00339-202ENST00000416769 GLRA1P23415 457 aa10.4□□□□□ -0.74
LINC00339-202ENST00000416769 TGFBR1P36897 503 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms