RNA–Protein interactions for RNA: YPL116W

HOS3, Transcript of Trichostatin A-insensitive homodimeric histone deacetylase (HDAC), yeast

Gene HOS3, Length 2,094 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HOS3	YPL116W	AIM9	P40053	627 aa	Known RBP	4.22	□□□□□ -1.73
HOS3	YPL116W	POL31	P46957	487 aa		4.22	□□□□□ -1.73
HOS3	YPL116W	HSH155	P49955	971 aa	Known RBP	4.22	□□□□□ -1.73
HOS3	YPL116W	YGL117W	P53133	265 aa		4.22	□□□□□ -1.73
HOS3	YPL116W	YBP2	P53169	641 aa		4.22	□□□□□ -1.73
HOS3	YPL116W	KRE33	P53914	1056 aa	Known RBP	4.22	□□□□□ -1.73
HOS3	YPL116W	KAP120	Q02932	1032 aa		4.22	□□□□□ -1.73
HOS3	YPL116W	PRP42	Q03776	544 aa	Known RBP	4.22	□□□□□ -1.73
HOS3	YPL116W	UTP14	Q04500	899 aa	Known RBP	4.22	□□□□□ -1.73
HOS3	YPL116W	YCG1	Q06680	1035 aa		4.22	□□□□□ -1.73
HOS3	YPL116W	NDE2	Q07500	545 aa		4.22	□□□□□ -1.73
HOS3	YPL116W	RSA1	Q08932	381 aa		4.22	□□□□□ -1.73
HOS3	YPL116W	THP3	Q12049	470 aa	Known RBP	4.22	□□□□□ -1.73
HOS3	YPL116W	SET6	Q12529	373 aa		4.22	□□□□□ -1.73
HOS3	YPL116W	TMA7	Q3E764	64 aa	Known RBP	4.22	□□□□□ -1.73
HOS3	YPL116W	VAS1	P07806	1104 aa	Known RBP	4.21	□□□□□ -1.74
HOS3	YPL116W	MIS1	P09440	975 aa	Known RBP	4.21	□□□□□ -1.74
HOS3	YPL116W	KIN2	P13186	1147 aa	Known RBP	4.21	□□□□□ -1.74
HOS3	YPL116W	SPO16	P17122	198 aa		4.21	□□□□□ -1.74
HOS3	YPL116W	UBA1	P22515	1024 aa	Known RBP	4.21	□□□□□ -1.74
HOS3	YPL116W	PRP28	P23394	588 aa		4.21	□□□□□ -1.74
HOS3	YPL116W	KCC4	P25389	1037 aa		4.21	□□□□□ -1.74
HOS3	YPL116W	ZIP1	P31111	875 aa		4.21	□□□□□ -1.74
HOS3	YPL116W	PRP19	P32523	503 aa	Known RBP	4.21	□□□□□ -1.74
HOS3	YPL116W	RAD5	P32849	1169 aa	Predicted RBP	4.21	□□□□□ -1.74
HOS3	YPL116W	YKL069W	P36088	180 aa		4.21	□□□□□ -1.74
HOS3	YPL116W	RDH54	P38086	958 aa		4.21	□□□□□ -1.74
HOS3	YPL116W	TDP1	P38319	544 aa		4.21	□□□□□ -1.74
HOS3	YPL116W	YHL050C	P38721	697 aa		4.21	□□□□□ -1.74
HOS3	YPL116W	SEC31	P38968	1273 aa	Known RBP	4.21	□□□□□ -1.74
HOS3	YPL116W	SHQ1	P40486	507 aa	Predicted RBP	4.21	□□□□□ -1.74
HOS3	YPL116W	CIT3	P43635	486 aa		4.21	□□□□□ -1.74
HOS3	YPL116W	STB2	P46679	850 aa		4.21	□□□□□ -1.74
HOS3	YPL116W	BNA3	P47039	444 aa	Known RBP	4.21	□□□□□ -1.74
HOS3	YPL116W	POL32	P47110	350 aa		4.21	□□□□□ -1.74
HOS3	YPL116W	STR2	P47164	639 aa		4.21	□□□□□ -1.74
HOS3	YPL116W	MNT2	P53059	558 aa		4.21	□□□□□ -1.74
HOS3	YPL116W	MNT4	P53745	580 aa		4.21	□□□□□ -1.74
HOS3	YPL116W	ORC4	P54791	529 aa		4.21	□□□□□ -1.74
HOS3	YPL116W	GTR1	Q00582	310 aa		4.21	□□□□□ -1.74
HOS3	YPL116W	SWP1	Q02795	286 aa		4.21	□□□□□ -1.74
HOS3	YPL116W	GSF2	Q04697	403 aa	Known RBP	4.21	□□□□□ -1.74
HOS3	YPL116W	CUE5	Q08412	411 aa	Known RBP	4.21	□□□□□ -1.74
HOS3	YPL116W	NCR1	Q12200	1170 aa		4.21	□□□□□ -1.74
HOS3	YPL116W	CMC2	Q3E7A4	109 aa		4.21	□□□□□ -1.74
HOS3	YPL116W	SCC2	Q04002	1493 aa		4.21	□□□□□ -1.74
HOS3	YPL116W	BNI1	P41832	1953 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	HIS4	P00815	799 aa	Known RBP	4.2	□□□□□ -1.74
HOS3	YPL116W	RPP2B	P02400	110 aa	Known RBP	4.2	□□□□□ -1.74
HOS3	YPL116W	STE12	P13574	688 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	RPL8A	P17076	256 aa	Known RBP	4.2	□□□□□ -1.74
HOS3	YPL116W	MSB1	P21339	1137 aa	Known RBP	4.2	□□□□□ -1.74
HOS3	YPL116W	KIN3	P22209	435 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	RPL8B	P29453	256 aa	Known RBP	4.2	□□□□□ -1.74
HOS3	YPL116W	HMX1	P32339	317 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	YBL010C	P32788	280 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	PHO11	P35842	467 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	KES1	P35844	434 aa	Known RBP	4.2	□□□□□ -1.74
HOS3	YPL116W	CAF4	P36130	643 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	POL12	P38121	705 aa	Predicted RBP	4.2	□□□□□ -1.74
HOS3	YPL116W	FTH1	P38310	465 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	PHO12	P38693	467 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	VPS45	P38932	577 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	PIK1	P39104	1066 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	FRT2	P39734	528 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	MKT1	P40850	830 aa	Known RBP	4.2	□□□□□ -1.74
HOS3	YPL116W	SKP2	P42843	763 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	ENT3	P47160	408 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	YNR063W	P53749	607 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	SAM50	P53969	484 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	UBX4	P54730	416 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	MAK10	Q02197	733 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	SRL4	Q03085	281 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	RSM24	Q03976	319 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	SSL1	Q04673	461 aa	Predicted RBP	4.2	□□□□□ -1.74
HOS3	YPL116W	REH1	Q06709	432 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	GRS2	Q06817	618 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	SNA4	Q07549	140 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	YLR031W	Q07978	186 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	YPR022C	Q12139	1133 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	TAH18	Q12181	623 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	YOR131C	Q12486	218 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	LAG2	Q92325	660 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	YOS9	Q99220	542 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	SEY1	Q99287	776 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	ADE6	P38972	1358 aa	Known RBP	4.2	□□□□□ -1.74
HOS3	YPL116W	ROM2	P51862	1356 aa	Known RBP	4.2	□□□□□ -1.74
HOS3	YPL116W	SES1	P07284	462 aa	Known RBP	4.2	□□□□□ -1.74
HOS3	YPL116W	MET3	P08536	511 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	GPA2	P10823	449 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	PMR1	P13586	950 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	RVS161	P25343	265 aa	Known RBP	4.2	□□□□□ -1.74
HOS3	YPL116W	RRP43	P25359	394 aa	Predicted RBP	4.2	□□□□□ -1.74
HOS3	YPL116W	RPS7A	P26786	190 aa	Known RBP	4.2	□□□□□ -1.74
HOS3	YPL116W	CDC15	P27636	974 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	NAM9	P27929	486 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	BCD1	P38772	366 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	EMP65	P40085	556 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	DLD2	P46681	530 aa	Known RBP	4.2	□□□□□ -1.74
HOS3	YPL116W	TAF4	P50105	388 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms