RNA–Protein interactions for RNA: YOR322C

LDB19, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene LDB19, Length 2,457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB19YOR322C CET1O13297 549 aaPredicted RBP6.16□□□□□ -1.42
LDB19YOR322C BI4P03879 638 aa6.16□□□□□ -1.42
LDB19YOR322C FUR4P05316 633 aaKnown RBP6.16□□□□□ -1.42
LDB19YOR322C RPS24AP0CX31 135 aaKnown RBP6.16□□□□□ -1.42
LDB19YOR322C RPS24BP0CX32 135 aaKnown RBP6.16□□□□□ -1.42
LDB19YOR322C CAD1P24813 409 aaKnown RBP6.16□□□□□ -1.42
LDB19YOR322C NAM9P27929 486 aa6.16□□□□□ -1.42
LDB19YOR322C LOS1P33418 1100 aaPredicted RBP6.16□□□□□ -1.42
LDB19YOR322C PHO11P35842 467 aa6.16□□□□□ -1.42
LDB19YOR322C TPO5P36029 618 aa6.16□□□□□ -1.42
LDB19YOR322C NUP133P36161 1157 aa6.16□□□□□ -1.42
LDB19YOR322C SOH1P38633 127 aa6.16□□□□□ -1.42
LDB19YOR322C PHO12P38693 467 aa6.16□□□□□ -1.42
LDB19YOR322C RPN10P38886 268 aaKnown RBP6.16□□□□□ -1.42
LDB19YOR322C STL1P39932 569 aa6.16□□□□□ -1.42
LDB19YOR322C UPF3P48412 387 aaKnown RBP6.16□□□□□ -1.42
LDB19YOR322C INA17Q02888 182 aa6.16□□□□□ -1.42
LDB19YOR322C DPB4Q04603 196 aaKnown RBP6.16□□□□□ -1.42
LDB19YOR322C THI3Q07471 609 aa6.16□□□□□ -1.42
LDB19YOR322C YPD1Q07688 167 aa6.16□□□□□ -1.42
LDB19YOR322C MST1P07236 462 aa6.16□□□□□ -1.42
LDB19YOR322C BIK1P11709 440 aa6.16□□□□□ -1.42
LDB19YOR322C FUN30P31380 1131 aa6.16□□□□□ -1.42
LDB19YOR322C MDJ1P35191 511 aa6.16□□□□□ -1.42
LDB19YOR322C BMT2P38278 337 aa6.16□□□□□ -1.42
LDB19YOR322C BSD2P38356 321 aa6.16□□□□□ -1.42
LDB19YOR322C KEL1P38853 1164 aaKnown RBP6.16□□□□□ -1.42
LDB19YOR322C NIT1P40447 199 aa6.16□□□□□ -1.42
LDB19YOR322C TED1P40533 473 aa6.16□□□□□ -1.42
LDB19YOR322C STB1P42845 420 aa6.16□□□□□ -1.42
LDB19YOR322C BRE2P43132 505 aa6.16□□□□□ -1.42
LDB19YOR322C RBL2P48606 106 aaKnown RBP6.16□□□□□ -1.42
LDB19YOR322C ECM38Q05902 660 aaPredicted RBP6.16□□□□□ -1.42
LDB19YOR322C YFT2Q06676 274 aa6.16□□□□□ -1.42
LDB19YOR322C YEH2Q07950 538 aa6.16□□□□□ -1.42
LDB19YOR322C AEP3Q12089 606 aa6.16□□□□□ -1.42
LDB19YOR322C GPR1Q12361 961 aa6.16□□□□□ -1.42
LDB19YOR322C SPO21Q12411 609 aa6.16□□□□□ -1.42
LDB19YOR322C YRF1-1P0CX20 1796 aa6.15□□□□□ -1.42
LDB19YOR322C YRF1-5P0CX21 1796 aa6.15□□□□□ -1.42
LDB19YOR322C YRF1-8P0CX22 1796 aa6.15□□□□□ -1.42
LDB19YOR322C HIS4P00815 799 aaKnown RBP6.15□□□□□ -1.42
LDB19YOR322C HOM2P13663 365 aaKnown RBP6.15□□□□□ -1.42
LDB19YOR322C RPL8AP17076 256 aaKnown RBP6.15□□□□□ -1.42
LDB19YOR322C FTH1P38310 465 aa6.15□□□□□ -1.42
LDB19YOR322C TIF4631P39935 952 aaKnown RBP6.15□□□□□ -1.42
LDB19YOR322C FMS1P50264 508 aa6.15□□□□□ -1.42
LDB19YOR322C TOF2Q02208 771 aa6.15□□□□□ -1.42
LDB19YOR322C RVB1Q03940 463 aaKnown RBP6.15□□□□□ -1.42
LDB19YOR322C VPS64Q03944 604 aa6.15□□□□□ -1.42
LDB19YOR322C MCM21Q06675 368 aa6.15□□□□□ -1.42
LDB19YOR322C VIK1Q12045 647 aa6.15□□□□□ -1.42
LDB19YOR322C YDL109CQ12103 647 aa6.15□□□□□ -1.42
LDB19YOR322C APC11Q12157 165 aa6.15□□□□□ -1.42
LDB19YOR322C DBP1P24784 617 aaKnown RBP6.15□□□□□ -1.43
LDB19YOR322C RPL8BP29453 256 aaKnown RBP6.15□□□□□ -1.43
LDB19YOR322C YBR138CP38277 524 aa6.15□□□□□ -1.43
LDB19YOR322C NTC20P38302 140 aaPredicted RBP6.15□□□□□ -1.43
LDB19YOR322C SDH8P38345 138 aa6.15□□□□□ -1.43
LDB19YOR322C RAD55P38953 406 aa6.15□□□□□ -1.43
LDB19YOR322C FRT2P39734 528 aa6.15□□□□□ -1.43
LDB19YOR322C FYV10P40492 516 aa6.15□□□□□ -1.43
LDB19YOR322C SPO74P45819 413 aa6.15□□□□□ -1.43
LDB19YOR322C YNR068CP53754 272 aa6.15□□□□□ -1.43
LDB19YOR322C DAK1P54838 584 aaKnown RBP6.15□□□□□ -1.43
LDB19YOR322C GYL1Q04322 720 aa6.15□□□□□ -1.43
LDB19YOR322C RGA2Q06407 1009 aa6.15□□□□□ -1.43
LDB19YOR322C VHS3Q08438 674 aa6.15□□□□□ -1.43
LDB19YOR322C YPR022CQ12139 1133 aa6.15□□□□□ -1.43
LDB19YOR322C SED4P25365 1065 aa6.14□□□□□ -1.43
LDB19YOR322C CDC15P27636 974 aa6.14□□□□□ -1.43
LDB19YOR322C VPS45P38932 577 aa6.14□□□□□ -1.43
LDB19YOR322C SSO2P39926 295 aa6.14□□□□□ -1.43
LDB19YOR322C LSM5P40089 93 aaKnown RBP6.14□□□□□ -1.43
LDB19YOR322C JLP2P40206 208 aa6.14□□□□□ -1.43
LDB19YOR322C SHQ1P40486 507 aaPredicted RBP6.14□□□□□ -1.43
LDB19YOR322C ASE1P50275 885 aa6.14□□□□□ -1.43
LDB19YOR322C PCL10P53124 433 aa6.14□□□□□ -1.43
LDB19YOR322C GPG1P53130 126 aa6.14□□□□□ -1.43
LDB19YOR322C ARA2Q04212 335 aa6.14□□□□□ -1.43
LDB19YOR322C EMI2Q04409 500 aaKnown RBP6.14□□□□□ -1.43
LDB19YOR322C BSC2Q05611 235 aa6.14□□□□□ -1.43
LDB19YOR322C CHS3P29465 1165 aa6.14□□□□□ -1.43
LDB19YOR322C ZIP1P31111 875 aa6.14□□□□□ -1.43
LDB19YOR322C SEC31P38968 1273 aaKnown RBP6.14□□□□□ -1.43
LDB19YOR322C CEP3P40969 608 aa6.14□□□□□ -1.43
LDB19YOR322C GUS1P46655 708 aaKnown RBP RIP-Chip data6.14□□□□□ -1.43not detected
LDB19YOR322C MET14Q02196 202 aa6.14□□□□□ -1.43
LDB19YOR322C CUS1Q02554 436 aaPredicted RBP6.14□□□□□ -1.43
LDB19YOR322C PSF3Q12146 194 aa6.14□□□□□ -1.43
LDB19YOR322C TRM732Q03496 1420 aa6.13□□□□□ -1.43
LDB19YOR322C SMC4Q12267 1418 aa6.13□□□□□ -1.43
LDB19YOR322C PHO8P11491 566 aa6.13□□□□□ -1.43
LDB19YOR322C RAD53P22216 821 aa6.13□□□□□ -1.43
LDB19YOR322C RAM2P29703 316 aa6.13□□□□□ -1.43
LDB19YOR322C MSN4P33749 630 aa6.13□□□□□ -1.43
LDB19YOR322C GND1P38720 489 aaKnown RBP6.13□□□□□ -1.43
LDB19YOR322C AXL1P40851 1208 aa6.13□□□□□ -1.43
LDB19YOR322C DLD2P46681 530 aaKnown RBP6.13□□□□□ -1.43
LDB19YOR322C POL31P46957 487 aa6.13□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 39.5 ms