RNA–Protein interactions for RNA: YOR261C

RPN8, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN8, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN8YOR261C YEN1P40028 759 aa5.47□□□□□ -1.53
RPN8YOR261C NOP15P53927 220 aaPredicted RBP5.47□□□□□ -1.53
RPN8YOR261C APM4Q99186 491 aa5.47□□□□□ -1.53
RPN8YOR261C YHM2Q04013 314 aa5.46□□□□□ -1.54
RPN8YOR261C MRH1Q12117 320 aaPredicted RBP5.46□□□□□ -1.54
RPN8YOR261C CLF1Q12309 687 aaPredicted RBP5.46□□□□□ -1.54
RPN8YOR261C RPS17AP02407 136 aaKnown RBP5.45□□□□□ -1.54
RPN8YOR261C ERG20P08524 352 aaKnown RBP5.45□□□□□ -1.54
RPN8YOR261C RPS17BP14127 136 aaKnown RBP5.45□□□□□ -1.54
RPN8YOR261C THR1P17423 357 aaKnown RBP5.45□□□□□ -1.54
RPN8YOR261C PRP28P23394 588 aa5.45□□□□□ -1.54
RPN8YOR261C FEN2P25621 512 aaKnown RBP5.45□□□□□ -1.54
RPN8YOR261C PIG2P40187 538 aa5.45□□□□□ -1.54
RPN8YOR261C NDC80P40460 691 aa5.45□□□□□ -1.54
RPN8YOR261C BUD8P41698 603 aa5.45□□□□□ -1.54
RPN8YOR261C QRI1P43123 477 aaKnown RBP5.45□□□□□ -1.54
RPN8YOR261C ATG4P53867 494 aa5.45□□□□□ -1.54
RPN8YOR261C STP4Q07351 490 aa5.45□□□□□ -1.54
RPN8YOR261C MSL5Q12186 476 aaKnown RBP RIP-Chip data5.45□□□□□ -1.54not detected
RPN8YOR261C IES1P43579 692 aa5.44□□□□□ -1.54
RPN8YOR261C VBA4Q04602 768 aaKnown RBP5.44□□□□□ -1.54
RPN8YOR261C CHS5Q12114 671 aaKnown RBP5.44□□□□□ -1.54
RPN8YOR261C KIN82P25341 720 aa5.43□□□□□ -1.54
RPN8YOR261C EUG1P32474 517 aa5.43□□□□□ -1.54
RPN8YOR261C MSS1P32559 526 aaPredicted RBP5.43□□□□□ -1.54
RPN8YOR261C COS111P38308 924 aa5.43□□□□□ -1.54
RPN8YOR261C YIL077CP40508 320 aa5.43□□□□□ -1.54
RPN8YOR261C CCT7P42943 550 aaKnown RBP5.43□□□□□ -1.54
RPN8YOR261C DUG1P43616 481 aaKnown RBP5.43□□□□□ -1.54
RPN8YOR261C RFX1P48743 811 aa5.43□□□□□ -1.54
RPN8YOR261C CTR1P49573 406 aa5.43□□□□□ -1.54
RPN8YOR261C PTA1Q01329 785 aaPredicted RBP5.43□□□□□ -1.54
RPN8YOR261C YFT2Q06676 274 aa5.43□□□□□ -1.54
RPN8YOR261C GLN4P13188 809 aaKnown RBP5.42□□□□□ -1.54
RPN8YOR261C DAL3P32459 195 aa5.42□□□□□ -1.54
RPN8YOR261C SET3P36124 751 aa5.42□□□□□ -1.54
RPN8YOR261C GPP2P40106 250 aaKnown RBP5.42□□□□□ -1.54
RPN8YOR261C ARG2P40360 574 aa5.42□□□□□ -1.54
RPN8YOR261C PXA1P41909 870 aa5.42□□□□□ -1.54
RPN8YOR261C STU2P46675 888 aa5.42□□□□□ -1.54
RPN8YOR261C USV1Q12132 391 aa5.42□□□□□ -1.54
RPN8YOR261C TAF3Q12297 353 aa5.42□□□□□ -1.54
RPN8YOR261C CDC26P14724 124 aa5.41□□□□□ -1.54
RPN8YOR261C KIN3P22209 435 aa5.41□□□□□ -1.54
RPN8YOR261C TSR4P25040 408 aa5.41□□□□□ -1.54
RPN8YOR261C GLG1P36143 616 aa5.41□□□□□ -1.54
RPN8YOR261C KHA1P40309 873 aa5.41□□□□□ -1.54
RPN8YOR261C MPS3P47069 682 aa5.41□□□□□ -1.54
RPN8YOR261C SEC15P22224 910 aa5.4□□□□□ -1.54
RPN8YOR261C PRP22P24384 1145 aaKnown RBP5.4□□□□□ -1.54
RPN8YOR261C DUN1P39009 513 aa5.4□□□□□ -1.54
RPN8YOR261C YJL206CP39529 758 aa5.4□□□□□ -1.54
RPN8YOR261C VID28P40547 921 aa5.4□□□□□ -1.54
RPN8YOR261C VPS73P53142 486 aaKnown RBP5.4□□□□□ -1.54
RPN8YOR261C YGR151CP53287 111 aa5.4□□□□□ -1.54
RPN8YOR261C SUT2Q12286 268 aa5.4□□□□□ -1.54
RPN8YOR261C RPS9BP05755 195 aaKnown RBP5.39□□□□□ -1.55
RPN8YOR261C CDC43P18898 376 aa5.39□□□□□ -1.55
RPN8YOR261C CTP1P38152 299 aa5.39□□□□□ -1.55
RPN8YOR261C YHR097CP38809 366 aaKnown RBP5.39□□□□□ -1.55
RPN8YOR261C NSE5Q03718 556 aa5.39□□□□□ -1.55
RPN8YOR261C YDL086WQ07505 273 aa5.39□□□□□ -1.55
RPN8YOR261C TMA17Q12513 150 aa5.39□□□□□ -1.55
RPN8YOR261C ACO1P19414 778 aaKnown RBP RIP-Chip data5.38□□□□□ -1.55not detected
RPN8YOR261C ATP12P22135 325 aa5.38□□□□□ -1.55
RPN8YOR261C PRE4P30657 266 aa5.38□□□□□ -1.55
RPN8YOR261C MF(ALPHA)2P32435 120 aa5.38□□□□□ -1.55
RPN8YOR261C SER1P33330 395 aaKnown RBP5.38□□□□□ -1.55
RPN8YOR261C CDS1P38221 457 aa5.38□□□□□ -1.55
RPN8YOR261C YBR071WP38243 211 aa5.38□□□□□ -1.55
RPN8YOR261C NIT2P47016 307 aa5.38□□□□□ -1.55
RPN8YOR261C TAH11P47112 604 aa5.38□□□□□ -1.55
RPN8YOR261C TAF4P50105 388 aa5.38□□□□□ -1.55
RPN8YOR261C PPN1Q04119 674 aa5.38□□□□□ -1.55
RPN8YOR261C NOP56Q12460 504 aaKnown RBP RIP-Chip data5.38□□□□□ -1.55not detected
RPN8YOR261C FUB1P25659 250 aa5.37□□□□□ -1.55
RPN8YOR261C TDP1P38319 544 aa5.37□□□□□ -1.55
RPN8YOR261C PAF1P38351 445 aa5.37□□□□□ -1.55
RPN8YOR261C BDH2P39713 417 aa5.37□□□□□ -1.55
RPN8YOR261C YJR120WP47157 116 aa5.37□□□□□ -1.55
RPN8YOR261C SKY1Q03656 742 aa5.37□□□□□ -1.55
RPN8YOR261C IZH3Q07959 543 aa5.37□□□□□ -1.55
RPN8YOR261C RMP1Q12530 201 aa5.37□□□□□ -1.55
RPN8YOR261C ABF1P14164 731 aa5.36□□□□□ -1.55
RPN8YOR261C GFA1P14742 717 aaKnown RBP5.36□□□□□ -1.55
RPN8YOR261C DMC1P25453 334 aa5.36□□□□□ -1.55
RPN8YOR261C GMH1P36125 273 aa5.36□□□□□ -1.55
RPN8YOR261C KSP1P38691 1029 aaKnown RBP5.36□□□□□ -1.55
RPN8YOR261C SPO1P53541 631 aa5.36□□□□□ -1.55
RPN8YOR261C TRE2Q08693 809 aa5.36□□□□□ -1.55
RPN8YOR261C AEP2P22136 580 aa5.35□□□□□ -1.55
RPN8YOR261C DGR2P32330 852 aa5.35□□□□□ -1.55
RPN8YOR261C NTH1P32356 751 aa5.35□□□□□ -1.55
RPN8YOR261C MTC7P32633 139 aa5.35□□□□□ -1.55
RPN8YOR261C CRG1P38892 291 aaRIP-Chip data5.35□□□□□ -1.55not detected
RPN8YOR261C RNR4P49723 345 aaKnown RBP5.35□□□□□ -1.55
RPN8YOR261C COG6P53959 839 aa5.35□□□□□ -1.55
RPN8YOR261C YPR027CQ12079 277 aa5.35□□□□□ -1.55
RPN8YOR261C HXT4P32467 576 aa5.34□□□□□ -1.55
RPN8YOR261C EMP70P32802 667 aa5.34□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms