RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W MBR1P23493 339 aa3.3□□□□□ -1.88
PEP12YOR036W STO1P34160 861 aaKnown RBP3.3□□□□□ -1.88
PEP12YOR036W YMC2P38087 329 aa3.3□□□□□ -1.88
PEP12YOR036W MEP2P41948 499 aa3.3□□□□□ -1.88
PEP12YOR036W TAX4P47030 604 aa3.3□□□□□ -1.88
PEP12YOR036W RTS3P53289 263 aa3.3□□□□□ -1.88
PEP12YOR036W HFD1Q04458 532 aa3.3□□□□□ -1.88
PEP12YOR036W MCM21Q06675 368 aa3.3□□□□□ -1.88
PEP12YOR036W TOP1P04786 769 aa3.29□□□□□ -1.88
PEP12YOR036W SFL1P20134 766 aa3.29□□□□□ -1.88
PEP12YOR036W SSD1P24276 1250 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88 RIP-Chip
PEP12YOR036W SAT4P25333 603 aaKnown RBP3.29□□□□□ -1.88
PEP12YOR036W MCD4P36051 919 aa3.29□□□□□ -1.88
PEP12YOR036W PCM1P38628 557 aaKnown RBP3.29□□□□□ -1.88
PEP12YOR036W MET13P53128 600 aa3.29□□□□□ -1.88
PEP12YOR036W SNP1Q00916 300 aaPredicted RBP3.29□□□□□ -1.88
PEP12YOR036W TMA17Q12513 150 aa3.29□□□□□ -1.88
PEP12YOR036W PHO5P00635 467 aa3.28□□□□□ -1.88
PEP12YOR036W ADE5,7P07244 802 aaKnown RBP3.28□□□□□ -1.88
PEP12YOR036W RAD18P10862 487 aa3.28□□□□□ -1.88
PEP12YOR036W KCC4P25389 1037 aa3.28□□□□□ -1.88
PEP12YOR036W PER1P25625 357 aa3.28□□□□□ -1.88
PEP12YOR036W HOG1P32485 435 aa3.28□□□□□ -1.88
PEP12YOR036W TYS1P36421 394 aaKnown RBP3.28□□□□□ -1.88
PEP12YOR036W PMC1P38929 1173 aaPredicted RBP3.28□□□□□ -1.88
PEP12YOR036W GPP1P41277 250 aaKnown RBP3.28□□□□□ -1.88
PEP12YOR036W FOL1P53848 824 aa3.28□□□□□ -1.88
PEP12YOR036W YPL068CQ02749 293 aa3.28□□□□□ -1.88
PEP12YOR036W MTQ2Q03920 221 aaPredicted RBP3.28□□□□□ -1.88
PEP12YOR036W HMO1Q03973 246 aaKnown RBP3.28□□□□□ -1.88
PEP12YOR036W FAP7Q12055 197 aaPredicted RBP3.28□□□□□ -1.88
PEP12YOR036W UGP1P32861 499 aaKnown RBP3.27□□□□□ -1.89
PEP12YOR036W TPM2P40414 161 aa3.27□□□□□ -1.89
PEP12YOR036W YJR096WP47137 282 aa3.27□□□□□ -1.89
PEP12YOR036W ASN1P49089 572 aaKnown RBP3.27□□□□□ -1.89
PEP12YOR036W PEX8P53248 589 aa3.27□□□□□ -1.89
PEP12YOR036W YGR151CP53287 111 aa3.27□□□□□ -1.89
PEP12YOR036W SPC98P53540 846 aa3.27□□□□□ -1.89
PEP12YOR036W YOL057WQ08225 711 aa3.27□□□□□ -1.89
PEP12YOR036W HMG1P12683 1054 aa3.26□□□□□ -1.89
PEP12YOR036W STE4P18851 423 aa3.26□□□□□ -1.89
PEP12YOR036W RNR1P21524 888 aaKnown RBP3.26□□□□□ -1.89
PEP12YOR036W EUG1P32474 517 aa3.26□□□□□ -1.89
PEP12YOR036W GRX7P38068 203 aa3.26□□□□□ -1.89
PEP12YOR036W YBR071WP38243 211 aa3.26□□□□□ -1.89
PEP12YOR036W KSP1P38691 1029 aaKnown RBP3.26□□□□□ -1.89
PEP12YOR036W CKB2P38930 258 aa3.26□□□□□ -1.89
PEP12YOR036W ALY2P47029 1046 aa3.26□□□□□ -1.89
PEP12YOR036W YJR120WP47157 116 aa3.26□□□□□ -1.89
PEP12YOR036W COG6P53959 839 aa3.26□□□□□ -1.89
PEP12YOR036W STP1Q00947 519 aa3.26□□□□□ -1.89
PEP12YOR036W ATG33Q06485 197 aa3.26□□□□□ -1.89
PEP12YOR036W GUD1Q07729 489 aa3.26□□□□□ -1.89
PEP12YOR036W CLF1Q12309 687 aaPredicted RBP3.26□□□□□ -1.89
PEP12YOR036W MIH1P23748 554 aa3.25□□□□□ -1.89
PEP12YOR036W APT2P36973 181 aa3.25□□□□□ -1.89
PEP12YOR036W NUG1P40010 520 aaKnown RBP3.25□□□□□ -1.89
PEP12YOR036W CCT5P40413 562 aaKnown RBP3.25□□□□□ -1.89
PEP12YOR036W GZF3P42944 551 aaKnown RBP3.25□□□□□ -1.89
PEP12YOR036W ORC4P54791 529 aa3.25□□□□□ -1.89
PEP12YOR036W NHX1Q04121 633 aa3.25□□□□□ -1.89
PEP12YOR036W ULA1Q12059 462 aa3.25□□□□□ -1.89
PEP12YOR036W GIN4Q12263 1142 aa3.25□□□□□ -1.89
PEP12YOR036W PEX1P24004 1043 aa3.24□□□□□ -1.89
PEP12YOR036W PRP19P32523 503 aaKnown RBP3.24□□□□□ -1.89
PEP12YOR036W HOT13P36078 116 aa3.24□□□□□ -1.89
PEP12YOR036W MIP6P38760 659 aaKnown RBP3.24□□□□□ -1.89
PEP12YOR036W YHR097CP38809 366 aaKnown RBP3.24□□□□□ -1.89
PEP12YOR036W RPN10P38886 268 aaKnown RBP3.24□□□□□ -1.89
PEP12YOR036W OAF1P39720 1047 aaPredicted RBP3.24□□□□□ -1.89
PEP12YOR036W ULP2P40537 1034 aaPredicted RBP3.24□□□□□ -1.89
PEP12YOR036W DUG1P43616 481 aaKnown RBP3.24□□□□□ -1.89
PEP12YOR036W AIM14P53109 570 aa3.24□□□□□ -1.89
PEP12YOR036W TRE2Q08693 809 aa3.24□□□□□ -1.89
PEP12YOR036W YTM1Q12024 460 aaPredicted RBP3.24□□□□□ -1.89
PEP12YOR036W Q0142Q9ZZW4 58 aa3.24□□□□□ -1.89
PEP12YOR036W SEC6P32844 805 aa3.23□□□□□ -1.89
PEP12YOR036W HSL7P38274 827 aa3.23□□□□□ -1.89
PEP12YOR036W MNN11P46985 422 aaKnown RBP3.23□□□□□ -1.89
PEP12YOR036W NOP9P47077 666 aaKnown RBP3.23□□□□□ -1.89
PEP12YOR036W BNA2P47125 453 aa3.23□□□□□ -1.89
PEP12YOR036W NMA2P53204 395 aa3.23□□□□□ -1.89
PEP12YOR036W BMS1Q08965 1183 aaKnown RBP3.23□□□□□ -1.89
PEP12YOR036W TMA7Q3E764 64 aaKnown RBP3.23□□□□□ -1.89
PEP12YOR036W LAM4P38800 1345 aa3.22□□□□□ -1.89
PEP12YOR036W ATP4P05626 244 aa3.22□□□□□ -1.89
PEP12YOR036W PLC1P32383 869 aa3.22□□□□□ -1.89
PEP12YOR036W BCS1P32839 456 aa3.22□□□□□ -1.89
PEP12YOR036W BIT2P38346 545 aa3.22□□□□□ -1.89
PEP12YOR036W DOT6P40059 670 aaKnown RBP3.22□□□□□ -1.89
PEP12YOR036W RET2P43621 546 aa3.22□□□□□ -1.89
PEP12YOR036W NIT2P47016 307 aa3.22□□□□□ -1.89
PEP12YOR036W PEX14P53112 341 aa3.22□□□□□ -1.89
PEP12YOR036W TGL2P54857 326 aa3.22□□□□□ -1.89
PEP12YOR036W THI22Q06490 572 aa3.22□□□□□ -1.89
PEP12YOR036W YDL086WQ07505 273 aa3.22□□□□□ -1.89
PEP12YOR036W YOR378WQ08902 515 aa3.22□□□□□ -1.89
PEP12YOR036W SLX4Q12098 748 aa3.22□□□□□ -1.89
PEP12YOR036W ECM3Q99252 613 aa3.22□□□□□ -1.89
PEP12YOR036W AEP2P22136 580 aa3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms